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ONTOLOGY REPORT - ANNOTATIONS

Term:vesicle transport along microtubule
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Accession:GO:0047496 term browser browse the term
Definition:The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.
Synonyms:exact_synonym: microtubule-based vesicle localization


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vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BICDL1 BICD family like cargo adaptor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:40,004,464...40,125,541
Ensembl chr14:39,914,464...40,123,628 		JBrowse link
G BICDL2 BICD family like cargo adaptor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:39,153,521...39,161,415
Ensembl chr 3:39,153,552...39,161,442 		JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,433,564...18,450,296
Ensembl chr 3:18,433,836...18,450,290 		JBrowse link
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:75,414,663...75,760,527
Ensembl chr 9:75,414,755...75,760,519 		JBrowse link
G HAP1 huntingtin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15242649) Ensembl
MGI
GO_Central		 PMID:15242649 GO_REF:0000033 GO_REF:0000107 NCBI chr12:20,938,463...20,950,053
Ensembl chr12:20,939,554...20,950,051 		JBrowse link
G HTT huntingtin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15242649) Ensembl
MGI		 PMID:15242649 GO_REF:0000107 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024 		JBrowse link
G KIF5B kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17360972) Ensembl
MGI		 PMID:17360972 GO_REF:0000107 NCBI chr10:42,637,105...42,693,551
Ensembl chr10:42,637,109...42,693,491 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chr 1:164,381,892...164,469,313
Ensembl chr 1:164,381,845...164,471,226 		JBrowse link
G NDE1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16107726) Ensembl
MGI		 PMID:16107726 GO_REF:0000107 NCBI chr 3:7,145,094...7,174,691
Ensembl chr 3:7,125,936...7,180,623 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16107726) Ensembl
MGI		 PMID:16107726 GO_REF:0000107 NCBI chr12:53,553,897...53,640,470
Ensembl chr12:53,557,175...53,640,457 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16107726) Ensembl
MGI
GO_Central		 PMID:16107726 GO_REF:0000033 GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,628,816...48,735,834 		JBrowse link
G PRKCZ protein kinase C zeta ISO Slc10a1/Ntcp-containing early endosomes RGD PMID:16734659 RGD:1642664 NCBI chr 6:64,073,343...64,159,187
Ensembl chr 6:64,068,577...64,163,472 		JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:76,837,673...76,868,156
Ensembl chr 3:76,837,430...76,869,778 		JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17190838) Ensembl
MGI		 PMID:17190838 GO_REF:0000107 NCBI chr 1:132,702,495...132,786,536
Ensembl chr 1:132,702,541...132,786,532 		JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:37871017) Ensembl
MGI		 PMID:37871017 GO_REF:0000107 NCBI chr 1:126,890,464...126,998,014
Ensembl chr 1:126,902,186...127,003,397
Ensembl chr 1:126,902,186...127,003,397 		JBrowse link
G TRAK1 trafficking kinesin protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:25,773,345...25,934,770
Ensembl chr13:25,774,250...25,935,828 		JBrowse link
G TRAK2 trafficking kinesin protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:104,991,261...105,056,054
Ensembl chr15:104,991,726...105,055,025 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 involved_in ISO PMID:22705394 UniProt PMID:22705394 RGD:10047362 NCBI chr  X:125,863,266...125,917,232
Ensembl chr  X:125,863,292...125,917,225 		JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF1A kinesin family member 1A involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr15:139,610,624...139,694,841
Ensembl chr15:139,610,627...139,694,826 		JBrowse link
G KIF1B kinesin family member 1B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 6:70,495,143...70,663,464
Ensembl chr 6:70,495,144...70,661,798 		JBrowse link
G KIF1C kinesin family member 1C involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr12:51,899,762...51,924,465
Ensembl chr12:51,897,494...51,924,432 		JBrowse link
G SYBU syntabulin ISO RGD PMID:17611281 RGD:13217407 NCBI chr 4:27,899,264...27,975,389
Ensembl chr 4:27,901,097...27,974,660 		JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:86,875,922...87,142,722
Ensembl chr 2:86,873,290...87,142,768 		JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:52,202,649...52,294,154
Ensembl chr 7:52,256,159...52,294,149 		JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:76,428,443...76,471,266
Ensembl chr 2:76,428,476...76,471,257 		JBrowse link
G AP3M1 adaptor related protein complex 3 subunit mu 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:76,813,158...76,835,674
Ensembl chr14:76,801,007...76,835,678 		JBrowse link
G AP3M2 adaptor related protein complex 3 subunit mu 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,167,118...11,190,857
Ensembl chr17:11,167,161...11,190,854 		JBrowse link
G AP3S1 adaptor related protein complex 3 subunit sigma 1 involved_in ISO (MGI:5437407|PMID:21998198)
(PMID:21998198)		 UniProt PMID:21998198 MGI:5437407 NCBI chr 2:119,965,539...120,039,948
Ensembl chr 2:119,965,539...120,039,947 		JBrowse link
G AP3S2 adaptor-related protein complex 3, sigma 2 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,395,159...55,462,352
Ensembl chr 7:55,391,913...55,469,858 		JBrowse link
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,156,460...21,160,738
Ensembl chr 5:21,147,767...21,160,735 		JBrowse link
G BLOC1S2 biogenesis of lysosomal organelles complex 1 subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:111,391,083...111,397,609
Ensembl chr14:111,388,898...111,397,594 		JBrowse link
G BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:51,590,497...51,591,222
Ensembl chr 6:51,590,497...51,591,222 		JBrowse link
G BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,093,619...4,095,790
Ensembl chr 8:4,092,050...4,095,772 		JBrowse link
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:5,324,467...5,363,346
Ensembl chr 7:5,321,655...5,363,538 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,168,944...126,184,813
Ensembl chr 1:126,165,994...126,184,858 		JBrowse link
G DTNBP1 dystrobrevin binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,602,470...11,720,156
Ensembl chr 7:11,600,795...11,720,318 		JBrowse link
G KIF1A kinesin family member 1A involved_in ISO (PMID:7539720) SynGO PMID:7539720 NCBI chr15:139,610,624...139,694,841
Ensembl chr15:139,610,627...139,694,826 		JBrowse link
G KIF1B kinesin family member 1B involved_in ISO (PMID:11389829) UniProt PMID:11389829 NCBI chr 6:70,495,143...70,663,464
Ensembl chr 6:70,495,144...70,661,798 		JBrowse link
G MADD MAP kinase activating death domain involved_in ISO (PMID:18849981) SynGO PMID:18849981 NCBI chr 2:15,270,783...15,315,459
Ensembl chr 2:15,270,789...15,315,477 		JBrowse link
G SNAPIN SNAP associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:95,987,524...95,989,527
Ensembl chr 4:95,984,358...95,989,474 		JBrowse link
G TRIM46 tripartite motif containing 46 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:26671463) Ensembl
MGI
GO_Central		 PMID:26671463 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:94,632,073...94,642,756
Ensembl chr 4:94,632,077...94,642,705 		JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNIH2 cornichon family AMPA receptor auxiliary protein 2 involved_in ISO PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr 2:6,102,347...6,109,424 JBrowse link
plus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FYCO1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:29,068,107...29,146,792
Ensembl chr13:29,066,986...29,146,755 		JBrowse link
G KIF13A kinesin family member 13A involved_in ISO (MGI:5142383|PMID:11106728)
(PMID:11106728)		 UniProt PMID:11106728 MGI:5142383 NCBI chr 7:13,498,354...13,716,844
Ensembl chr 7:13,498,222...13,716,757 		JBrowse link
G KIF5B kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17360972) Ensembl
MGI		 PMID:17360972 GO_REF:0000107 NCBI chr10:42,637,105...42,693,551
Ensembl chr10:42,637,109...42,693,491 		JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAP2 microtubule associated protein 2 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr15:112,156,578...112,462,932
Ensembl chr15:112,236,119...112,462,929 		JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:22127389 RGD:12790715 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,738,659 		JBrowse link
G TRIM46 tripartite motif containing 46 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 4:94,632,073...94,642,756
Ensembl chr 4:94,632,077...94,642,705 		JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BORCS5 BLOC-1 related complex subunit 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:59,969,806...60,072,976
Ensembl chr 5:59,970,260...60,072,942 		JBrowse link
G MAP2 microtubule associated protein 2 involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr15:112,156,578...112,462,932
Ensembl chr15:112,236,119...112,462,929 		JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:22127389 RGD:12790715 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,738,659 		JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STK11 serine/threonine kinase 11 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:77,229,888...77,249,322
Ensembl chr 2:77,230,372...77,249,327 		JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF1A kinesin family member 1A involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr15:139,610,624...139,694,841
Ensembl chr15:139,610,627...139,694,826 		JBrowse link
G KIF1B kinesin family member 1B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 6:70,495,143...70,663,464
Ensembl chr 6:70,495,144...70,661,798 		JBrowse link
G KIF1C kinesin family member 1C involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr12:51,899,762...51,924,465
Ensembl chr12:51,897,494...51,924,432 		JBrowse link
G KIF5A kinesin family member 5A involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:22,813,617...22,851,976
Ensembl chr 5:22,816,854...22,851,973 		JBrowse link
G KIF5B kinesin family member 5B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:42,637,105...42,693,551
Ensembl chr10:42,637,109...42,693,491 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17651
    localization 5337
      organelle localization 607
        establishment of organelle localization 466
          organelle transport along microtubule 84
            vesicle transport along microtubule 47
              anterograde neuronal dense core vesicle transport + 7
              minus-end-directed vesicle transport along microtubule 0
              negative regulation of vesicle transport along microtubule + 1
              plus-end-directed vesicle transport along microtubule + 3
              positive regulation of vesicle transport along microtubule + 5
              regulation of vesicle transport along microtubule + 6
              retrograde neuronal dense core vesicle transport + 6
              synaptic vesicle transport along microtubule + 22
Path 2
Term Annotations click to browse term
  biological_process 17651
    cellular process 17214
      cellular localization 3482
        establishment of localization in cell 2029
          intracellular transport 1308
            cytoskeleton-dependent intracellular transport 197
              transport along microtubule 173
                organelle transport along microtubule 84
                  vesicle transport along microtubule 47
                    anterograde neuronal dense core vesicle transport + 7
                    minus-end-directed vesicle transport along microtubule 0
                    negative regulation of vesicle transport along microtubule + 1
                    plus-end-directed vesicle transport along microtubule + 3
                    positive regulation of vesicle transport along microtubule + 5
                    regulation of vesicle transport along microtubule + 6
                    retrograde neuronal dense core vesicle transport + 6
                    synaptic vesicle transport along microtubule + 22
paths to the root