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ONTOLOGY REPORT - ANNOTATIONS

Term:vesicle transport along microtubule
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Accession:GO:0047496 term browser browse the term
Definition:The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.
Synonyms:exact_synonym: microtubule-based vesicle localization


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vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BICDL1 BICD family like cargo adaptor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:119,989,236...120,094,495
Ensembl chr12:119,989,236...120,094,494 		JBrowse link
G BICDL2 BICD family like cargo adaptor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:3,027,682...3,036,944
Ensembl chr16:3,027,682...3,036,944 		JBrowse link
G CDR2L cerebellar degeneration related protein 2 like involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:74,987,632...75,005,800
Ensembl chr17:74,987,632...75,005,800 		JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IMP (PMID:22261744) UniProt PMID:22261744 NCBI chr16:28,466,653...28,492,082
Ensembl chr16:28,474,111...28,495,575 		JBrowse link
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 involved_in IMP
ISS		 (PMID:24561039) UniProt
HGNC-UCL		 PMID:24561039 GO_REF:0000024 NCBI chr 7:95,772,554...96,110,322
Ensembl chr 7:95,772,506...96,110,322 		JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:171,861,549...172,006,638
Ensembl chr 5:171,861,549...172,006,873 		JBrowse link
G HAP1 huntingtin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15242649) Ensembl
MGI
GO_Central		 PMID:15242649 GO_REF:0000033 GO_REF:0000107 NCBI chr17:41,717,739...41,734,646
Ensembl chr17:41,717,742...41,734,644 		JBrowse link
G HTT huntingtin involved_in
acts_upstream_of_or_within		 IMP
ISO		 (PMID:20515468)
(PMID:15242649)		 UniProt
MGI		 PMID:15242649 PMID:20515468 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,363...3,243,957 		JBrowse link
G KIF5B kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS
IDA		 (PMID:17360972)
(PMID:28426968)		 Ensembl
MGI
HGNC-UCL
ARUK-UCL		 PMID:17360972 PMID:28426968 GO_REF:0000024 GO_REF:0000107 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425 		JBrowse link
G KIFC1 kinesin family member C1 acts_upstream_of_or_within ISO (PMID:17360972) MGI PMID:17360972 NCBI chr 6:33,391,461...33,409,896
Ensembl chr 6:33,391,823...33,409,896 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chr15:66,386,912...66,491,544
Ensembl chr15:66,386,837...66,491,656 		JBrowse link
G NDE1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16107726) Ensembl
MGI
GO_Central		 PMID:16107726 GO_REF:0000033 GO_REF:0000107 NCBI chr16:15,643,382...15,726,353
Ensembl chr16:15,643,267...15,734,691 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16107726) Ensembl
MGI
GO_Central		 PMID:16107726 GO_REF:0000033 GO_REF:0000107 NCBI chr17:8,413,131...8,474,328
Ensembl chr17:8,413,131...8,490,411 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:16107726)
(PMID:10729324)		 Ensembl
MGI
GO_Central
BHF-UCL		 PMID:10729324 PMID:16107726 GO_REF:0000033 GO_REF:0000107 NCBI chr17:2,593,183...2,685,615
Ensembl chr17:2,593,183...2,685,615 		JBrowse link
G PRKCZ protein kinase C zeta involved_in ISO
IEA		 Slc10a1/Ntcp-containing early endosomes RGD
Ensembl		 PMID:16734659 GO_REF:0000107 RGD:1642664 NCBI chr 1:2,048,504...2,185,395
Ensembl chr 1:2,050,411...2,185,395 		JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in IMP (PMID:21303926) UniProt PMID:21303926 NCBI chr 2:65,086,854...65,130,106
Ensembl chr 2:65,070,696...65,130,331 		JBrowse link
G RASGRP1 RAS guanyl releasing protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17190838) Ensembl
MGI		 PMID:17190838 GO_REF:0000107 NCBI chr15:38,488,103...38,564,814
Ensembl chr15:38,488,103...38,565,575 		JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:37871017) Ensembl
MGI		 PMID:37871017 GO_REF:0000107 NCBI chr15:44,562,696...44,663,662
Ensembl chr15:44,554,818...44,663,688 		JBrowse link
G TRAK1 trafficking kinesin protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:42,013,093...42,225,890
Ensembl chr 3:42,013,802...42,225,890 		JBrowse link
G TRAK2 trafficking kinesin protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:201,377,207...201,451,458
Ensembl chr 2:201,377,207...201,451,500 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 involved_in ISO PMID:22705394 UniProt PMID:22705394 RGD:10047362 NCBI chr  X:155,881,345...155,943,769
NCBI chr  Y:57,067,865...57,130,289
Ensembl chr  Y:57,067,865...57,130,289
Ensembl chr  X:57,067,865...57,130,289 		JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF1A kinesin family member 1A involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:240,713,767...240,821,403
Ensembl chr 2:240,713,761...240,824,293 		JBrowse link
G KIF1B kinesin family member 1B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603 		JBrowse link
G KIF1C kinesin family member 1C involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr17:4,997,950...5,028,401
Ensembl chr17:4,997,950...5,028,401 		JBrowse link
G KIF5B kinesin family member 5B involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425 		JBrowse link
G SYBU syntabulin involved_in ISO
IEA		 RGD
Ensembl		 PMID:17611281 GO_REF:0000107 RGD:13217407 NCBI chr 8:109,573,978...109,691,600
Ensembl chr 8:109,573,978...109,691,791 		JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:78,000,522...78,294,698
Ensembl chr 5:78,000,522...78,294,762 		JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 involved_in ISS
IBA		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr15:82,659,281...82,709,875
Ensembl chr15:82,659,281...82,710,112 		JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:2,100,988...2,164,616
Ensembl chr19:2,100,988...2,164,468 		JBrowse link
G AP3M1 adaptor related protein complex 3 subunit mu 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:74,120,255...74,150,828
Ensembl chr10:74,120,255...74,150,842 		JBrowse link
G AP3M2 adaptor related protein complex 3 subunit mu 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:42,153,063...42,171,183
Ensembl chr 8:42,152,946...42,171,673 		JBrowse link
G AP3S1 adaptor related protein complex 3 subunit sigma 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:115,841,935...115,914,081
Ensembl chr 5:115,841,592...115,914,081 		JBrowse link
G AP3S2 adaptor related protein complex 3 subunit sigma 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:89,830,599...89,893,994
Ensembl chr15:89,830,599...89,894,638 		JBrowse link
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:55,716,046...55,719,703
Ensembl chr12:55,716,038...55,720,087 		JBrowse link
G BLOC1S2 biogenesis of lysosomal organelles complex 1 subunit 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:100,273,278...100,286,680
Ensembl chr10:100,273,280...100,286,680 		JBrowse link
G BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:45,178,784...45,217,083
Ensembl chr19:45,178,784...45,216,933 		JBrowse link
G BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:6,716,174...6,717,664
Ensembl chr 4:6,716,174...6,717,664 		JBrowse link
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:8,013,567...8,064,414
Ensembl chr 6:8,013,567...8,064,396 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:45,587,123...45,609,716
Ensembl chr15:45,587,214...45,615,945 		JBrowse link
G DTNBP1 dystrobrevin binding protein 1 involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:15,522,807...15,663,058
Ensembl chr 6:15,522,807...15,663,058 		JBrowse link
G KIF1A kinesin family member 1A involved_in ISO (PMID:7539720) SynGO PMID:7539720 NCBI chr 2:240,713,767...240,821,403
Ensembl chr 2:240,713,761...240,824,293 		JBrowse link
G KIF1B kinesin family member 1B involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603 		JBrowse link
G MADD MAP kinase activating death domain involved_in ISO (PMID:18849981) SynGO PMID:18849981 NCBI chr11:47,269,188...47,330,031
Ensembl chr11:47,269,161...47,330,031 		JBrowse link
G SNAPIN SNAP associated protein involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:153,658,654...153,661,852
Ensembl chr 1:153,658,703...153,661,852 		JBrowse link
G TRIM46 tripartite motif containing 46 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:26671463) Ensembl
MGI
GO_Central		 PMID:26671463 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:155,173,849...155,184,971
Ensembl chr 1:155,173,787...155,184,971 		JBrowse link
minus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIFC1 kinesin family member C1 acts_upstream_of_or_within ISO (PMID:17360972) MGI PMID:17360972 NCBI chr 6:33,391,461...33,409,896
Ensembl chr 6:33,391,823...33,409,896 		JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNIH2 cornichon family AMPA receptor auxiliary protein 2 involved_in ISO PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr11:66,278,175...66,284,206
Ensembl chr11:66,278,175...66,285,301 		JBrowse link
plus-end-directed vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FYCO1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IMP
IBA		 (PMID:20100911) UniProt
GO_Central		 PMID:20100911 GO_REF:0000033 NCBI chr 3:45,917,903...45,995,824
Ensembl chr 3:45,917,903...45,995,824 		JBrowse link
G KIF13A kinesin family member 13A involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:17,759,126...17,987,635
Ensembl chr 6:17,759,183...17,987,635 		JBrowse link
G KIF3A kinesin family member 3A involved_in TAS (PMID:16298999) BHF-UCL PMID:16298999 NCBI chr 5:132,688,812...132,737,546
Ensembl chr 5:132,692,628...132,737,638 		JBrowse link
G KIF3B kinesin family member 3B involved_in TAS (PMID:16298999) BHF-UCL PMID:16298999 NCBI chr20:32,277,651...32,335,011
Ensembl chr20:32,277,651...32,335,011 		JBrowse link
G KIF5B kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17360972) Ensembl
MGI		 PMID:17360972 GO_REF:0000107 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425 		JBrowse link
G KIFAP3 kinesin associated protein 3 involved_in TAS (PMID:16298999) BHF-UCL PMID:16298999 NCBI chr 1:169,921,329...170,085,184
Ensembl chr 1:169,921,326...170,085,208 		JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAP2 microtubule associated protein 2 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:209,424,047...209,734,112
Ensembl chr 2:209,424,047...209,734,147 		JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:22127389 GO_REF:0000107 RGD:12790715 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103 		JBrowse link
G TRIM46 tripartite motif containing 46 involved_in IEA
ISS		 Ensembl
ARUK-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:155,173,849...155,184,971
Ensembl chr 1:155,173,787...155,184,971 		JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BORCS5 BLOC-1 related complex subunit 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:12,357,078...12,471,233
Ensembl chr12:12,357,078...12,471,233 		JBrowse link
G MAP2 microtubule associated protein 2 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:209,424,047...209,734,112
Ensembl chr 2:209,424,047...209,734,147 		JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MECP2 methyl-CpG binding protein 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:22127389 GO_REF:0000107 RGD:12790715 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103 		JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STK11 serine/threonine kinase 11 involved_in IMP
IBA
IEA		 (PMID:24643070) UniProt
GO_Central
Ensembl		 PMID:24643070 GO_REF:0000033 GO_REF:0000107 NCBI chr19:1,205,778...1,228,431
Ensembl chr19:1,177,558...1,228,431 		JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF1A kinesin family member 1A involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:240,713,767...240,821,403
Ensembl chr 2:240,713,761...240,824,293 		JBrowse link
G KIF1B kinesin family member 1B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603 		JBrowse link
G KIF1C kinesin family member 1C involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr17:4,997,950...5,028,401
Ensembl chr17:4,997,950...5,028,401 		JBrowse link
G KIF5A kinesin family member 5A involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr12:57,550,044...57,586,633
Ensembl chr12:57,546,026...57,586,633 		JBrowse link
G KIF5B kinesin family member 5B involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19789
    localization 5916
      organelle localization 684
        establishment of organelle localization 537
          organelle transport along microtubule 99
            vesicle transport along microtubule 53
              anterograde neuronal dense core vesicle transport + 8
              minus-end-directed vesicle transport along microtubule 1
              negative regulation of vesicle transport along microtubule + 1
              plus-end-directed vesicle transport along microtubule + 6
              positive regulation of vesicle transport along microtubule + 5
              regulation of vesicle transport along microtubule + 6
              retrograde neuronal dense core vesicle transport + 6
              synaptic vesicle transport along microtubule + 22
Path 2
Term Annotations click to browse term
  biological_process 19789
    cellular process 18958
      cellular localization 3880
        establishment of localization in cell 2267
          intracellular transport 1500
            cytoskeleton-dependent intracellular transport 227
              transport along microtubule 200
                organelle transport along microtubule 99
                  vesicle transport along microtubule 53
                    anterograde neuronal dense core vesicle transport + 8
                    minus-end-directed vesicle transport along microtubule 1
                    negative regulation of vesicle transport along microtubule + 1
                    plus-end-directed vesicle transport along microtubule + 6
                    positive regulation of vesicle transport along microtubule + 5
                    regulation of vesicle transport along microtubule + 6
                    retrograde neuronal dense core vesicle transport + 6
                    synaptic vesicle transport along microtubule + 22
paths to the root