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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of RNA export from nucleus
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Accession:GO:0046831 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm.
Synonyms:exact_synonym: regulation of RNA export from cell nucleus;   regulation of RNA export out of nucleus;   regulation of RNA transport from nucleus to cytoplasm;   regulation of RNA-nucleus export


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regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 acts_upstream_of_or_within IDA (PMID:12496368) MGI PMID:12496368 NCBI chr 4:129,596,143...129,637,402
Ensembl chr 4:129,596,957...129,636,096 		JBrowse link
negative regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nup153 nucleoporin 153 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:46,833,369...46,890,682
Ensembl chr13:46,833,381...46,881,416 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:150,268,544...150,325,686
Ensembl chr 1:150,268,589...150,325,686 		JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:117,180,572...117,212,903
Ensembl chr10:117,180,578...117,215,920 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:153,331,506...153,363,464
Ensembl chr 1:153,331,504...153,363,406 		JBrowse link
G Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:129,596,143...129,637,402
Ensembl chr 4:129,596,957...129,636,096 		JBrowse link
G Nrde2 nrde-2 necessary for RNA interference, domain containing involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:100,091,709...100,126,981
Ensembl chr12:100,091,711...100,125,912 		JBrowse link
regulation of mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8l A kinase anchor protein 8-like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:32,540,398...32,569,589
Ensembl chr17:32,540,398...32,569,581 		JBrowse link
G Alkbh5 alkB homolog 5, RNA demethylase acts_upstream_of_or_within ISO (PMID:23177736) UniProt PMID:23177736 NCBI chr11:60,428,509...60,449,338
Ensembl chr11:60,427,207...60,449,338 		JBrowse link
G Iws1 IWS1, SUPT6 interacting protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:32,200,377...32,237,384
Ensembl chr18:32,200,794...32,237,381 		JBrowse link
G Neat1 nuclear paraspeckle assembly transcript 1 (non-protein coding) acts_upstream_of_or_within_negative_effect ISO (PMID:19716791) FlyBase PMID:19716791 NCBI chr19:5,874,736...5,895,508
Ensembl chr19:5,874,736...5,895,898 		JBrowse link
G Nsun2 NOL1/NOP2/Sun domain family member 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:69,760,135...69,783,899
Ensembl chr13:69,681,865...69,783,899 		JBrowse link
G Setd2 SET domain containing 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701 		JBrowse link
G Supt6 SPT6, histone chaperone and transcription elongation factor involved_in IMP (MGI:5508611|PMID:17234882) UniProt PMID:17234882 MGI:5508611 NCBI chr11:78,097,575...78,136,798
Ensembl chr11:78,097,572...78,136,813 		JBrowse link
G Thoc2 THO complex 2 acts_upstream_of_or_within IMP (PMID:24315442) MGI PMID:24315442 NCBI chr  X:40,883,869...41,000,878
Ensembl chr  X:40,883,868...41,009,551 		JBrowse link
G Thoc5 THO complex 5 acts_upstream_of_or_within IMP (PMID:24315442) MGI PMID:24315442 NCBI chr11:4,845,339...4,878,867
Ensembl chr11:4,845,320...4,878,867 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT|involved_in ISO (PMID:22253824) UniProt PMID:22253824 NCBI chr 1:150,268,544...150,325,686
Ensembl chr 1:150,268,589...150,325,686 		JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:119,900,930...120,015,659
Ensembl chr 6:119,900,930...120,015,633 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    localization 5534
      regulation of localization 2349
        regulation of transport 1891
          regulation of nucleobase-containing compound transport 18
            regulation of RNA export from nucleus 16
              negative regulation of RNA export from nucleus + 2
              positive regulation of RNA export from nucleus + 4
              regulation of mRNA export from nucleus + 11
              regulation of tRNA export from nucleus + 0
Path 2
Term Annotations click to browse term
  biological_process 28573
    localization 5534
      establishment of localization 4833
        establishment of localization in cell 2138
          intracellular transport 1381
            nuclear transport 368
              nucleocytoplasmic transport 368
                nuclear export 179
                  RNA export from nucleus 93
                    regulation of RNA export from nucleus 16
                      negative regulation of RNA export from nucleus + 2
                      positive regulation of RNA export from nucleus + 4
                      regulation of mRNA export from nucleus + 11
                      regulation of tRNA export from nucleus + 0
paths to the root