ONTOLOGY REPORT - ANNOTATIONS |
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Term: | regulation of nucleocytoplasmic transport |
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Accession: | GO:0046822
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browse the term
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Definition: | Any process that modulates the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm. |
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Cdkn2a |
cyclin-dependent kinase inhibitor 2A |
acts_upstream_of_or_within |
ISO |
MGI:106184 (MGI:3511413|PMID:15485902) |
RGD |
PMID:15485902 |
MGI:3511413 |
NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
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Ier3 |
immediate early response 3 |
acts_upstream_of_or_within |
ISO |
MGI:3773690 (MGI:5432078|PMID:20467439) |
RGD |
PMID:20467439 |
MGI:5432078 |
NCBI chr20:2,928,378...2,929,582
Ensembl chr20:2,928,378...2,929,583
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Inpp4b |
inositol polyphosphate-4-phosphatase type II B |
acts_upstream_of_or_within |
ISO |
(MGI:5295788|PMID:21982707) |
RGD |
PMID:21982707 |
MGI:5295788 |
NCBI chr19:25,920,189...26,670,085
Ensembl chr19:25,925,358...26,280,634
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Mx2 |
MX dynamin like GTPase 2 |
involved_in |
ISO |
(PMID:15184662) |
RGD |
PMID:15184662 |
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NCBI chr11:36,905,698...36,936,308
Ensembl chr11:36,906,111...36,930,342
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Nup214 |
nucleoporin 214 |
involved_in |
ISO |
(PMID:11000203) |
RGD |
PMID:11000203 |
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NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568
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Ppp1cc |
protein phosphatase 1 catalytic subunit gamma |
acts_upstream_of_or_within |
ISO |
(MGI:3702260|PMID:17369396) |
RGD |
PMID:17369396 |
MGI:3702260 |
NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
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Ppp1r12a |
protein phosphatase 1, regulatory subunit 12A |
acts_upstream_of_or_within |
ISO |
(MGI:3702260|PMID:17369396) |
RGD |
PMID:17369396 |
MGI:3702260 |
NCBI chr 7:43,482,808...43,593,689
Ensembl chr 7:43,482,803...43,593,425
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Rbm4 |
RNA binding motif protein 4 |
involved_in |
ISO |
(PMID:12628928), (PMID:17284590) (MGI:4436983|PMID:19801630) |
RGD |
PMID:12628928 PMID:17284590 PMID:19801630 |
MGI:4436983 |
NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
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Tmem53 |
transmembrane protein 53 |
involved_in |
ISO |
(PMID:33824347) (MGI:6713651|PMID:33824347) |
RGD |
PMID:33824347 |
MGI:6713651 |
NCBI chr 5:130,721,780...130,737,692
Ensembl chr 5:130,721,659...130,737,692
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Bard1 |
BRCA1 associated RING domain 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:15265711) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:15265711 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:72,616,070...72,694,553
Ensembl chr 9:72,623,155...72,694,265
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Cdk5 |
cyclin-dependent kinase 5 |
acts_upstream_of_or_within |
ISO |
(MGI:3720993|PMID:17591690) |
RGD |
PMID:17591690 |
MGI:3720993 |
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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Hdac3 |
histone deacetylase 3 |
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IMP |
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RGD |
PMID:21695276 |
RGD:7247725 |
NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
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Park7 |
Parkinsonism associated deglycase |
involved_in |
ISO ISS |
UniProtKB:Q99683|UniProtKB:Q9UER7 (PMID:15983381) GO_REF:0000024 |
RGD ParkinsonsUK-UCL |
PMID:15983381 |
GO_REF:0000024 |
NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
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Rangap1 |
RAN GTPase activating protein 1 |
involved_in |
ISO |
(PMID:16449645) |
RGD |
PMID:16449645 |
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NCBI chr 7:113,224,695...113,250,441
Ensembl chr 7:113,224,703...113,250,438
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Sp100 |
SP100 nuclear antigen |
involved_in |
ISO |
(PMID:17245429) |
RGD |
PMID:17245429 |
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NCBI chr 9:86,310,990...86,377,036
Ensembl chr 9:86,311,032...86,377,034
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Txn1 |
thioredoxin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3804363|PMID:18555775) |
Ensembl RGD |
PMID:18555775 |
GO_REF:0000107 MGI:3804363 |
NCBI chr 5:72,712,334...72,724,564
Ensembl chr 5:72,711,933...72,724,629
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Akap1 |
A-kinase anchoring protein 1 |
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IMP |
NFATc3 |
RGD |
PMID:19358331 |
RGD:2312604 |
NCBI chr10:73,621,021...73,654,123
Ensembl chr10:73,621,883...73,653,896
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Angpt1 |
angiopoietin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:4437182|PMID:20060382) |
Ensembl RGD |
PMID:20060382 |
GO_REF:0000107 MGI:4437182 |
NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
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Apod |
apolipoprotein D |
involved_in |
ISO ISS |
(PMID:14551159) GO_REF:0000024 |
RGD UniProt |
PMID:14551159 |
GO_REF:0000024 |
NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
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Cabp1 |
calcium binding protein 1 |
involved_in |
IMP |
PMID:18303947 |
UniProt |
PMID:18303947 |
RGD:8553324 |
NCBI chr12:41,385,234...41,448,930
Ensembl chr12:41,378,897...41,448,927
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Cd36 |
CD36 molecule |
involved_in |
ISO IEA |
(MGI:4850200|PMID:20978343) GO_REF:0000107 |
RGD Ensembl |
PMID:20978343 |
GO_REF:0000107 MGI:4850200 |
NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
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Cd36-ps1 |
CD36 molecule, pseudogene 1 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 4:17,487,837...17,514,900
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Chp1 |
calcineurin-like EF-hand protein 1 |
involved_in |
ISO ISS |
(PMID:10593895) GO_REF:0000024 |
RGD UniProt |
PMID:10593895 |
GO_REF:0000024 |
NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251
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Ei24 |
EI24, autophagy associated transmembrane protein |
acts_upstream_of_or_within |
ISO |
(MGI:5606261|PMID:24821838) |
RGD |
PMID:24821838 |
MGI:5606261 |
NCBI chr 8:36,494,289...36,510,653
Ensembl chr 8:36,494,289...36,510,571
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Fermt1 |
FERM domain containing kindlin 1 |
involved_in |
ISO |
(MGI:5571208|PMID:24681597) |
RGD |
PMID:24681597 |
MGI:5571208 |
NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
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Hnf4a |
hepatocyte nuclear factor 4, alpha |
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IDA |
STAT5b |
RGD |
PMID:16584384 |
RGD:1625011 |
NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
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Mdfic |
MyoD family inhibitor domain containing |
involved_in |
ISO |
(MGI:4943413|PMID:15207726) |
RGD |
PMID:15207726 |
MGI:4943413 |
NCBI chr 4:43,972,310...44,052,162
Ensembl chr 4:43,972,507...44,052,161
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Nf1 |
neurofibromin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2176057|MGI:2450311 (MGI:2445662|PMID:12469121) |
Ensembl RGD |
PMID:12469121 |
GO_REF:0000107 MGI:2445662 |
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
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Pkia |
cAMP-dependent protein kinase inhibitor alpha |
acts_upstream_of_or_within |
ISO |
(MGI:894256|PMID:9218452) |
RGD |
PMID:9218452 |
MGI:894256 |
NCBI chr 2:94,398,869...94,473,638
Ensembl chr 2:94,398,869...94,414,282
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Pkig |
cAMP-dependent protein kinase inhibitor gamma |
acts_upstream_of_or_within |
ISO |
(MGI:894256|PMID:9218452) |
RGD |
PMID:9218452 |
MGI:894256 |
NCBI chr 3:152,330,486...152,398,085
Ensembl chr 3:152,366,041...152,398,082
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Ppp2ca |
protein phosphatase 2 catalytic subunit alpha |
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IMP |
Nfkb1 |
RGD |
PMID:18322138 |
RGD:8693423 |
NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862
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Rab23 |
RAB23, member RAS oncogene family |
involved_in |
ISO |
(PMID:22365972) |
RGD |
PMID:22365972 |
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NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927
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RGD1565355 |
similar to fatty acid translocase/CD36 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
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Sirt6 |
sirtuin 6 |
involved_in |
ISO |
(MGI:6103696|PMID:28355567) |
RGD |
PMID:28355567 |
MGI:6103696 |
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
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Sumo1 |
small ubiquitin-like modifier 1 |
involved_in |
ISO |
(PMID:17264123) |
RGD |
PMID:17264123 |
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NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
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Ufm1 |
ubiquitin-fold modifier 1 |
involved_in |
ISO |
(PMID:28393202) |
RGD |
PMID:28393202 |
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NCBI chr 2:137,969,476...137,977,620
Ensembl chr 2:137,966,678...137,978,089 Ensembl chr 2:137,966,678...137,978,089
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Rbm10 |
RNA binding motif protein 10 |
involved_in |
ISO |
(PMID:35393574) |
RGD |
PMID:35393574 |
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NCBI chr X:1,540,399...1,572,571
Ensembl chr X:1,540,398...1,572,575
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Nup153 |
nucleoporin 153 |
involved_in |
ISO IEA ISS |
(PMID:22253824) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:22253824 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876
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Tpr |
translocated promoter region, nuclear basket protein |
involved_in |
ISO ISS |
(PMID:21613532), (PMID:22253824) GO_REF:0000024 |
RGD UniProt |
PMID:21613532 PMID:22253824 |
GO_REF:0000024 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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Nedd4 |
NEDD4 E3 ubiquitin protein ligase |
involved_in |
ISO |
(PMID:17218261) |
RGD |
PMID:17218261 |
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NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
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Anp32b |
acidic nuclear phosphoprotein 32 family member B |
involved_in |
ISO |
(PMID:17178712) |
RGD |
PMID:17178712 |
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NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717
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Bag3 |
BAG cochaperone 3 |
involved_in |
ISO |
(PMID:26159920) |
RGD |
PMID:26159920 |
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NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
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Camk1 |
calcium/calmodulin-dependent protein kinase I |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:23867755) (MGI:4456961|PMID:11081517) |
RGD |
PMID:11081517 PMID:23867755 |
MGI:4456961 |
NCBI chr 4:146,481,196...146,492,039
Ensembl chr 4:146,481,196...146,492,081
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Camk4 |
calcium/calmodulin-dependent protein kinase IV |
acts_upstream_of_or_within |
ISO |
(MGI:4456961|PMID:11081517) |
RGD |
PMID:11081517 |
MGI:4456961 |
NCBI chr18:24,582,988...24,811,918
Ensembl chr18:24,585,269...24,802,487
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Ctdspl2 |
CTD small phosphatase like 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:5613417|PMID:25100727) |
Ensembl RGD |
PMID:25100727 |
GO_REF:0000107 MGI:5613417 |
NCBI chr 3:108,914,650...108,970,620
Ensembl chr 3:108,915,280...108,967,227
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Emd |
emerin |
involved_in |
ISO IEA |
(PMID:16858403) GO_REF:0000107 |
RGD Ensembl |
PMID:16858403 |
GO_REF:0000107 |
NCBI chr X:152,038,990...152,042,190
Ensembl chr X:152,038,998...152,045,807
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Gas6 |
growth arrest specific 6 |
involved_in |
ISO ISS |
(PMID:18680538) GO_REF:0000024 |
RGD UniProt |
PMID:18680538 |
GO_REF:0000024 |
NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
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Gsk3b |
glycogen synthase kinase 3 beta |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:14744935) GO_REF:0000107 |
RGD Ensembl |
PMID:14744935 |
GO_REF:0000107 |
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
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Mdm2 |
MDM2 proto-oncogene |
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IMP |
p53 |
RGD |
PMID:17881359 |
RGD:2317374 |
NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
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Ppm1a |
protein phosphatase, Mg2+/Mn2+ dependent, 1A |
acts_upstream_of_or_within |
ISO |
(MGI:5613417|PMID:25100727) |
RGD |
PMID:25100727 |
MGI:5613417 |
NCBI chr 6:91,439,094...91,486,139
Ensembl chr 6:91,438,834...91,480,697
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Prkaca |
protein kinase cAMP-activated catalytic subunit alpha |
acts_upstream_of_or_within |
ISO |
(MGI:3686547|PMID:17043310) |
RGD |
PMID:17043310 |
MGI:3686547 |
NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430
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Prkd1 |
protein kinase D1 |
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IMP |
Hdac5 |
RGD |
PMID:16648482 PMID:17823368 |
RGD:243065275, RGD:307436944 |
NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
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Ran |
RAN, member RAS oncogene family |
involved_in |
ISO |
(PMID:15602554) |
RGD |
PMID:15602554 |
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NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
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Rapgef3 |
Rap guanine nucleotide exchange factor 3 |
involved_in |
ISO |
(PMID:23867755) |
RGD |
PMID:23867755 |
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NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
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Rbm22 |
RNA binding motif protein 22 |
involved_in |
ISO ISS |
(PMID:21122810) GO_REF:0000024 |
RGD UniProt |
PMID:21122810 |
GO_REF:0000024 |
NCBI chr18:54,013,374...54,024,182
Ensembl chr18:54,013,351...54,024,569
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Sfn |
stratifin |
involved_in |
ISO |
(MGI:3768327|PMID:17938205) |
RGD |
PMID:17938205 |
MGI:3768327 |
Ensembl chr 5:145,826,201...145,831,314
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Sirt6 |
sirtuin 6 |
involved_in |
ISO |
(PMID:25009184), (PMID:26787900) (MGI:6101624|PMID:27457971) |
RGD |
PMID:25009184 PMID:26787900 PMID:27457971 |
MGI:6101624 |
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
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Tpr |
translocated promoter region, nuclear basket protein |
involved_in |
IMP |
PMID:11839768 |
UniProt |
PMID:11839768 |
RGD:8553300 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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Wipf1 |
WAS/WASL interacting protein family, member 1 |
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IDA |
N-WASP |
RGD |
PMID:11687573 |
RGD:634538 |
NCBI chr 3:58,314,521...58,416,668
Ensembl chr 3:58,314,542...58,372,742
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Xpo4 |
exportin 4 |
involved_in |
ISO |
(PMID:16449645) |
RGD |
PMID:16449645 |
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NCBI chr15:31,716,762...31,807,908
Ensembl chr15:31,716,762...31,807,908
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Ywhae |
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:12917326) |
UniProt RGD |
PMID:12917326 |
GO_REF:0000024 |
NCBI chr10:60,584,665...60,622,352
Ensembl chr10:60,584,652...60,671,589
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Akap5 |
A-kinase anchoring protein 5 |
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IMP |
NFATc4 |
RGD |
PMID:17640527 |
RGD:2313203 |
NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578
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Bag3 |
BAG cochaperone 3 |
involved_in |
ISO |
(PMID:26159920) |
RGD |
PMID:26159920 |
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NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
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Brca1 |
BRCA1, DNA repair associated |
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IMP |
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RGD |
PMID:19074549 |
RGD:10059411 |
NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
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Cdh1 |
cadherin 1 |
involved_in |
ISO |
(PMID:16338932) |
RGD |
PMID:16338932 |
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NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
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Cdk1 |
cyclin-dependent kinase 1 |
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IMP |
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RGD |
PMID:18356527 |
RGD:2316481 |
NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
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Chp2 |
calcineurin-like EF hand protein 2 |
involved_in |
ISO ISS |
(PMID:18815128) GO_REF:0000024 |
RGD UniProt |
PMID:18815128 |
GO_REF:0000024 |
NCBI chr 1:176,757,945...176,772,443
Ensembl chr 1:176,757,876...176,772,139
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Dmap1 |
DNA methyltransferase 1-associated protein 1 |
involved_in |
ISO |
(PMID:15367675) |
RGD |
PMID:15367675 |
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NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742
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Ect2 |
epithelial cell transforming 2 |
involved_in |
ISO |
(MGI:3762312|PMID:17904126) |
RGD |
PMID:17904126 |
MGI:3762312 |
NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911
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Efcab7 |
EF-hand calcium binding domain 7 |
involved_in |
ISO |
(MGI:5908325|PMID:24582806) |
RGD |
PMID:24582806 |
MGI:5908325 |
NCBI chr 5:114,525,403...114,576,130
Ensembl chr 5:114,525,167...114,576,129
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G |
Ep300 |
E1A binding protein p300 |
involved_in |
IMP ISO |
Smad-2/3/4 (PMID:24120661) |
RGD |
PMID:24120661 PMID:18292803 |
RGD:2312266 |
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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G |
Flna |
filamin A |
involved_in |
ISO |
(PMID:15684392) |
RGD |
PMID:15684392 |
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NCBI chr X:152,007,758...152,034,266
Ensembl chr X:152,007,758...152,031,052
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G |
Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
ISO |
MGI:108075 (MGI:3686547|PMID:17043310) |
RGD |
PMID:17043310 |
MGI:3686547 |
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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G |
Gper1 |
G protein-coupled estrogen receptor 1 |
|
IMP |
Mapk1/3 |
RGD |
PMID:24262995 |
RGD:39939015 |
NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
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G |
Hcls1 |
hematopoietic cell specific Lyn substrate 1 |
involved_in |
ISO |
(PMID:23001182) |
RGD |
PMID:23001182 |
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NCBI chr11:63,817,482...63,840,943
Ensembl chr11:63,817,476...63,841,014
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G |
Hdac3 |
histone deacetylase 3 |
involved_in |
ISO ISS |
(PMID:25190803) GO_REF:0000024 |
RGD UniProt |
PMID:25190803 |
GO_REF:0000024 |
NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
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G |
Hsp90aa1 |
heat shock protein 90 alpha family class A member 1 |
|
IMP |
|
RGD |
PMID:20980790 |
RGD:5686397 |
NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
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G |
Hsp90ab1 |
heat shock protein 90 alpha family class B member 1 |
|
IMP |
|
RGD |
PMID:20980790 |
RGD:5686397 |
NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
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G |
Hyal2 |
hyaluronidase 2 |
involved_in |
ISO IEA |
(MGI:3851310|PMID:19366691) GO_REF:0000107 |
RGD Ensembl |
PMID:19366691 |
GO_REF:0000107 MGI:3851310 |
NCBI chr 8:108,241,895...108,246,853
Ensembl chr 8:108,243,133...108,246,850
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G |
Ifng |
interferon gamma |
involved_in |
ISO |
(PMID:22504299) |
RGD |
PMID:22504299 |
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NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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G |
Il6 |
interleukin 6 |
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IDA |
Stat3 |
RGD |
PMID:12015387 |
RGD:2306946 |
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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G |
Ipo5 |
importin 5 |
involved_in |
ISO |
(MGI:5504359|PMID:22730302) |
RGD |
PMID:22730302 |
MGI:5504359 |
NCBI chr15:97,990,755...98,041,074
Ensembl chr15:98,005,299...98,041,126
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G |
Jak2 |
Janus kinase 2 |
|
IMP |
Stat3 |
RGD |
PMID:15530849 |
RGD:1641930 |
NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
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G |
Jup |
junction plakoglobin |
involved_in |
ISO |
(PMID:10825188), (PMID:14661054) |
RGD |
PMID:10825188 PMID:14661054 |
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NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057
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G |
Lep |
leptin |
involved_in |
ISO |
(MGI:4889014|PMID:21234744) |
RGD |
PMID:21234744 |
MGI:4889014 |
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
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G |
Mapk1 |
mitogen activated protein kinase 1 |
involved_in |
IMP |
PMID:19524539 |
UniProt |
PMID:19524539 |
RGD:12793003 |
NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
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G |
Mapk14 |
mitogen activated protein kinase 14 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3687609|PMID:16954198) |
Ensembl RGD |
PMID:16954198 |
GO_REF:0000107 MGI:3687609 |
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
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G |
Mavs |
mitochondrial antiviral signaling protein |
involved_in |
ISO |
(PMID:18818105) |
RGD |
PMID:18818105 |
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NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094
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G |
Nutf2 |
nuclear transport factor 2 |
|
IMP |
|
RGD |
PMID:9368653 |
RGD:9831374 |
NCBI chr19:33,752,319...33,773,595
Ensembl chr19:33,752,291...33,773,591
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G |
Pik3r1 |
phosphoinositide-3-kinase regulatory subunit 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:4442277|PMID:20348926) GO_REF:0000107 (PMID:20348923) |
UniProt RGD Ensembl |
PMID:20348923 PMID:20348926 |
GO_REF:0000024 GO_REF:0000107 MGI:4442277 |
NCBI chr 2:32,878,942...32,963,611
Ensembl chr 2:32,882,032...32,963,631
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G |
Pik3r2 |
phosphoinositide-3-kinase regulatory subunit 2 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:4442277|PMID:20348926) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:20348926 |
GO_REF:0000024 GO_REF:0000107 MGI:4442277 |
NCBI chr16:18,665,517...18,674,067
Ensembl chr16:18,665,457...18,674,065
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G |
Prkcd |
protein kinase C, delta |
involved_in |
ISO |
(PMID:19059439) |
RGD |
PMID:19059439 |
|
NCBI chr16:5,769,226...5,807,214
Ensembl chr16:5,769,215...5,799,352
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G |
Prkcq |
protein kinase C, theta |
|
IMP |
|
RGD |
PMID:12697665 |
RGD:724661 |
NCBI chr17:67,246,394...67,379,049
Ensembl chr17:67,246,394...67,378,704
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G |
Prkd1 |
protein kinase D1 |
involved_in |
ISO |
(MGI:5787845|PMID:27184844) |
RGD |
PMID:27184844 |
MGI:5787845 |
NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
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G |
Psen1 |
presenilin 1 |
involved_in |
ISO |
(PMID:10508860) |
RGD |
PMID:10508860 |
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NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
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G |
Ptgs2 |
prostaglandin-endoperoxide synthase 2 |
|
IMP |
Nfkb p65 |
RGD |
PMID:20472710 |
RGD:4891488 |
NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
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G |
Ptpn22 |
protein tyrosine phosphatase, non-receptor type 22 |
involved_in |
ISO |
(MGI:5562517|PMID:23871208) |
RGD |
PMID:23871208 |
MGI:5562517 |
NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
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G |
Ptpn5 |
protein tyrosine phosphatase, non-receptor type 5 |
|
IMP |
|
RGD |
PMID:12483215 |
RGD:9835024 |
NCBI chr 1:97,620,638...97,681,186
Ensembl chr 1:97,620,642...97,679,882
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G |
Ran |
RAN, member RAS oncogene family |
involved_in |
ISO |
(PMID:18691641) |
RGD |
PMID:18691641 |
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NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
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G |
Rbm22 |
RNA binding motif protein 22 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21122810) |
UniProt RGD |
PMID:21122810 |
GO_REF:0000024 |
NCBI chr18:54,013,374...54,024,182
Ensembl chr18:54,013,351...54,024,569
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G |
Shh |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:108075 (MGI:3686547|PMID:17043310) |
Ensembl RGD |
PMID:17043310 |
GO_REF:0000107 MGI:3686547 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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G |
Smo |
smoothened, frizzled class receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:95729|MGI:98297 (MGI:3686547|PMID:17043310) |
Ensembl RGD |
PMID:17043310 |
GO_REF:0000107 MGI:3686547 |
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
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G |
Tardbp |
TAR DNA binding protein |
involved_in |
ISO |
(MGI:5920587|PMID:28585542) |
RGD |
PMID:28585542 |
MGI:5920587 |
NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
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G |
Tek |
TEK receptor tyrosine kinase |
acts_upstream_of_or_within |
ISO |
(MGI:4437182|PMID:20060382) |
RGD |
PMID:20060382 |
MGI:4437182 |
NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
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G |
Tgfb1 |
transforming growth factor, beta 1 |
involved_in |
ISO ISS |
(PMID:19366691) GO_REF:0000024 |
RGD AgBase |
PMID:19366691 |
GO_REF:0000024 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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G |
Tnfrsf1a |
TNF receptor superfamily member 1A |
|
IMP |
NF-kappaB |
RGD |
PMID:20967881 |
RGD:5130945 |
NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
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G |
Tpr |
translocated promoter region, nuclear basket protein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:18794356) |
UniProt RGD |
PMID:18794356 |
GO_REF:0000024 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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G |
Trim28 |
tripartite motif-containing 28 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:23665872) |
UniProt RGD |
PMID:23665872 |
GO_REF:0000024 |
NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
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G |
Uaca |
uveal autoantigen with coiled-coil domains and ankyrin repeats |
acts_upstream_of_or_within |
ISO |
MGI:3043446 (MGI:3056865|PMID:15271982) |
RGD |
PMID:15271982 |
MGI:3056865 |
NCBI chr 8:61,259,415...61,347,789
Ensembl chr 8:61,259,477...61,347,789
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G |
Ubr5 |
ubiquitin protein ligase E3 component n-recognin 5 |
involved_in |
ISO |
(PMID:21118991) |
RGD |
PMID:21118991 |
|
NCBI chr 7:69,116,758...69,224,490
Ensembl chr 7:69,116,761...69,224,903
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G |
Xbp1 |
X-box binding protein 1 |
involved_in |
ISO |
(PMID:25190803) |
RGD |
PMID:25190803 |
|
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
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G |
Zc3h12a |
zinc finger CCCH type containing 12A |
involved_in |
ISO |
(PMID:24048733) |
RGD |
PMID:24048733 |
|
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
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G |
Zic1 |
Zic family member 1 |
involved_in |
ISO |
(MGI:3688043|PMID:11238441) |
RGD |
PMID:11238441 |
MGI:3688043 |
NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731
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G |
Zpr1 |
ZPR1 zinc finger |
involved_in |
IBA ISO |
PMID:21873635 (MGI:3575865|PMID:15767679), (MGI:5424069|PMID:22422766) (PMID:11283611) |
RGD |
PMID:11283611 PMID:15767679 PMID:22422766 PMID:21873635 |
MGI:3575865 MGI:5424069, RGD:13792537 |
NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
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|
G |
Riok2 |
RIO kinase 2 |
involved_in |
ISO |
(PMID:19564402) |
RGD |
PMID:19564402 |
|
NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512
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G |
Cpsf6 |
cleavage and polyadenylation specific factor 6 |
involved_in |
ISO |
(PMID:19864460) |
RGD |
PMID:19864460 |
|
NCBI chr 7:52,956,589...53,001,783
Ensembl chr 7:52,956,589...52,988,122
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G |
Dhx9 |
DExH-box helicase 9 |
involved_in |
ISO |
(PMID:11402034) |
RGD |
PMID:11402034 |
|
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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G |
Khdrbs1 |
KH RNA binding domain containing, signal transduction associated 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21613532) |
UniProt RGD |
PMID:21613532 |
GO_REF:0000024 |
NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
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G |
Ncbp2 |
nuclear cap binding protein subunit 2 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
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G |
Nrde2 |
NRDE-2, necessary for RNA interference, domain containing |
involved_in |
ISO |
(PMID:30842217) |
RGD |
PMID:30842217 |
|
NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915
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G |
Dnajc27 |
DnaJ heat shock protein family (Hsp40) member C27 |
involved_in |
ISO |
(MGI:5571536|PMID:24746703) |
RGD |
PMID:24746703 |
MGI:5571536 |
NCBI chr 6:27,068,713...27,098,449
Ensembl chr 6:27,068,686...27,098,449
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|
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G |
Akap8l |
A-kinase anchoring protein 8 like |
involved_in |
ISO |
(PMID:11402034) |
RGD |
PMID:11402034 |
|
NCBI chr 7:11,332,671...11,362,287
Ensembl chr 7:11,332,672...11,362,275
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G |
Iws1 |
interacts with SUPT6H, CTD assembly factor 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:17234882) |
UniProt Ensembl RGD |
PMID:17234882 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr18:23,695,496...23,737,363
Ensembl chr18:23,695,425...23,736,172
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G |
Nsun2 |
NOP2/Sun RNA methyltransferase 2 |
involved_in |
ISO |
(PMID:28418038) |
RGD |
PMID:28418038 |
|
NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862
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|
G |
Setd2 |
SET domain containing 2, histone lysine methyltransferase |
involved_in |
ISO |
(PMID:19141475) |
RGD |
PMID:19141475 |
|
NCBI chr 8:110,511,808...110,597,489
Ensembl chr 8:110,511,772...110,597,489
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|
G |
Supt6h |
SPT6 homolog, histone chaperone and transcription elongation factor |
involved_in |
ISO |
(MGI:5508611|PMID:17234882) |
RGD |
PMID:17234882 |
MGI:5508611 |
NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780
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|
G |
Thoc2 |
THO complex subunit 2 |
acts_upstream_of_or_within |
ISO |
(MGI:5529717|PMID:24315442) |
RGD |
PMID:24315442 |
MGI:5529717 |
NCBI chr X:120,634,966...120,749,569
Ensembl chr X:120,634,968...120,749,513
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|
G |
Thoc5 |
THO complex subunit 5 |
acts_upstream_of_or_within |
ISO |
(MGI:5529717|PMID:24315442) |
RGD |
PMID:24315442 |
MGI:5529717 |
NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718
|
|
G |
Tpr |
translocated promoter region, nuclear basket protein |
NOT|involved_in |
ISO |
(PMID:22253824) |
RGD |
PMID:22253824 |
|
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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|
|
G |
Cdkn2a |
cyclin-dependent kinase inhibitor 2A |
involved_in |
ISO |
(PMID:10360174) |
RGD |
PMID:10360174 |
|
NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
|
|
G |
Chchd4 |
coiled-coil-helix-coiled-coil-helix domain containing 4 |
acts_upstream_of_or_within |
ISO |
(MGI:5516376|PMID:24101517) |
RGD |
PMID:24101517 |
MGI:5516376 |
NCBI chr 4:123,968,264...123,977,398
Ensembl chr 4:123,968,265...123,977,414
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|
G |
Frat1 |
FRAT regulator of WNT signaling pathway 1 |
involved_in |
ISO |
(PMID:12223487) |
RGD |
PMID:12223487 |
|
NCBI chr 1:240,638,288...240,640,857
Ensembl chr 1:240,638,296...240,640,945
|
|
G |
Gsk3b |
glycogen synthase kinase 3 beta |
involved_in |
ISO |
(PMID:12223487) |
RGD |
PMID:12223487 |
|
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
|
|
G |
Ifi27 |
interferon, alpha-inducible protein 27 |
acts_upstream_of_or_within |
ISO |
MGI:5582315 (MGI:5581598|PMID:22427340) UniProtKB:O14980 (PMID:22427340) |
RGD |
PMID:22427340 |
MGI:5581598 |
NCBI chr 6:122,590,461...122,596,996
Ensembl chr 6:122,590,472...122,779,294
|
|
G |
Il4 |
interleukin 4 |
involved_in |
ISO |
(PMID:24280217) |
RGD |
PMID:24280217 |
|
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
|
|
G |
Ptpn11 |
protein tyrosine phosphatase, non-receptor type 11 |
acts_upstream_of_or_within |
ISO |
MGI:2176524 (MGI:2679752|PMID:12937170) |
RGD |
PMID:12937170 |
MGI:2679752 |
NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
|
|
G |
Ptpn14 |
protein tyrosine phosphatase, non-receptor type 14 |
involved_in |
ISO |
(PMID:22948661) |
RGD |
PMID:22948661 |
|
NCBI chr13:101,268,258...101,420,508
Ensembl chr13:101,268,416...101,414,088
|
|
G |
Sirt7 |
sirtuin 7 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6323967|PMID:31075303) |
UniProt RGD |
PMID:31075303 |
GO_REF:0000024 MGI:6323967 |
NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172
|
|
G |
Tpr |
translocated promoter region, nuclear basket protein |
NOT|involved_in |
ISO |
(PMID:22253824) |
RGD |
PMID:22253824 |
|
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
|
|
G |
Uhmk1 |
U2AF homology motif kinase 1 |
involved_in |
ISO IEA IBA |
(PMID:12093740) GO_REF:0000107 PMID:21873635 |
RGD Ensembl |
PMID:12093740 PMID:21873635 |
GO_REF:0000107, RGD:13792537 |
NCBI chr13:82,396,646...82,416,292
Ensembl chr13:82,401,187...82,416,292
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G |
Xpo1 |
exportin 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3036437|PMID:14981260) |
RGD |
PMID:14981260 |
MGI:3036437 |
NCBI chr14:97,233,263...97,275,536
Ensembl chr14:97,233,270...97,275,498
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G |
Agtr2 |
angiotensin II receptor, type 2 |
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IDA |
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RGD |
PMID:14657020 |
RGD:1566502 |
NCBI chr X:112,119,673...112,124,060
Ensembl chr X:112,120,228...112,124,057
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G |
Bmp4 |
bone morphogenetic protein 4 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:22529382) GO_REF:0000107 |
RGD Ensembl |
PMID:22529382 |
GO_REF:0000107 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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G |
Epm2a |
EPM2A glucan phosphatase, laforin |
acts_upstream_of_or_within |
ISO |
(MGI:3695866|PMID:16971387) |
RGD |
PMID:16971387 |
MGI:3695866 |
NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
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G |
Nolc1 |
nucleolar and coiled-body phosphoprotein 1 |
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IDA |
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RGD |
PMID:1623516 |
RGD:633419 |
NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
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G |
Nup54 |
nucleoporin 54 |
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IDA |
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RGD |
PMID:8707840 |
RGD:633404 |
NCBI chr14:15,617,630...15,636,029
Ensembl chr14:15,617,679...15,636,028
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G |
Nup58 |
nucleoporin 58 |
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IDA |
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RGD |
PMID:8707840 |
RGD:633404 |
NCBI chr15:34,358,170...34,407,160
Ensembl chr15:34,358,277...34,407,060
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G |
Nup62 |
nucleoporin 62 |
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IDA |
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RGD |
PMID:8707840 |
RGD:633404 |
NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174
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G |
Tgfb1 |
transforming growth factor, beta 1 |
acts_upstream_of_or_within |
ISO |
(MGI:2176657|PMID:11799106) |
RGD |
PMID:11799106 |
MGI:2176657 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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G |
Tpr |
translocated promoter region, nuclear basket protein |
NOT|involved_in |
IMP ISO |
PMID:11839768 (PMID:22253824) |
RGD |
PMID:22253824 PMID:11839768 |
RGD:8553300 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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G |
Khdrbs1 |
KH RNA binding domain containing, signal transduction associated 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (MGI:2446384|PMID:12496368) |
UniProt RGD |
PMID:12496368 |
GO_REF:0000024 MGI:2446384 |
NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
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Term paths to the root
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