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ONTOLOGY REPORT - ANNOTATIONS


Term:viral entry into host cell
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Accession:GO:0046718 term browser browse the term
Definition:The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
Comment:Viral attachment to the host cell is not part of viral entry in GO because virus attachment does not always lead to viral entry: attachment can also result in the virion being carried by the host cell to another location.
Synonyms:exact_synonym: entry of virus into host cell;   phage translocation;   viral penetration;   virion penetration;   virion penetration into host cell;   virus entry into host cell
 alt_id: GO:0019063
 xref: VZ:936


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viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in IEA
IDA
TAS
(PMID:16051304), (PMID:32221306), (PMID:33000221), (PMID:33082294), (PMID:33713620)
(PMID:15165741)
GOC
UniProt
PMID:15165741 PMID:16051304 PMID:32221306 PMID:33000221 PMID:33082294 PMID:33713620 GO_REF:0000108 NCBI chr  X:15,518,197...15,607,211
Ensembl chr  X:15,561,033...15,602,148
Ensembl chr  X:15,561,033...15,602,148
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in IDA (PMID:33713620) UniProt PMID:33713620 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G ANPEP alanyl aminopeptidase, membrane involved_in IEA GOC GO_REF:0000108 NCBI chr15:89,784,895...89,814,852
Ensembl chr15:89,784,895...89,815,401
JBrowse link
G AVP arginine vasopressin involved_in IDA (PMID:33713620) UniProt PMID:33713620 NCBI chr20:3,082,556...3,093,521
Ensembl chr20:3,082,556...3,084,724
JBrowse link
G AVPR1B arginine vasopressin receptor 1B involved_in IDA (PMID:33713620) UniProt PMID:33713620 NCBI chr 1:206,106,936...206,117,388
Ensembl chr 1:206,106,936...206,117,699
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IMP (PMID:21047970) CACAO PMID:21047970 NCBI chr19:41,219,223...41,261,766
Ensembl chr19:41,219,223...41,261,766
JBrowse link
G BSG basigin (Ok blood group) involved_in IEA GOC GO_REF:0000108 NCBI chr19:571,283...583,493
Ensembl chr19:571,277...583,493
Ensembl chr19:571,277...583,493
JBrowse link
G CD209 CD209 molecule involved_in IDA (PMID:24623090) FlyBase PMID:24623090 NCBI chr19:7,739,993...7,747,534
Ensembl chr19:7,739,993...7,747,564
JBrowse link
G CD46 CD46 molecule involved_in IEA GOC GO_REF:0000108 NCBI chr 1:207,752,038...207,795,516
Ensembl chr 1:207,752,057...207,795,513
Ensembl chr 1:207,752,057...207,795,513
JBrowse link
G CD55 CD55 molecule (Cromer blood group) involved_in IEA GOC GO_REF:0000108 NCBI chr 1:207,321,674...207,360,966
Ensembl chr 1:207,321,376...207,386,804
Ensembl chr 1:207,321,376...207,386,804
JBrowse link
G CD80 CD80 molecule involved_in IEA GOC GO_REF:0000108 NCBI chr 3:119,524,293...119,559,614
Ensembl chr 3:119,524,293...119,559,614
JBrowse link
G CD81 CD81 molecule involved_in TAS (PMID:14676841) UniProt PMID:14676841 NCBI chr11:2,376,180...2,397,402
Ensembl chr11:2,376,177...2,397,419
Ensembl chr11:2,376,177...2,397,419
JBrowse link
G CD86 CD86 molecule involved_in IEA GOC GO_REF:0000108 NCBI chr 3:122,055,362...122,121,136
Ensembl chr 3:122,055,362...122,121,139
JBrowse link
G CDHR3 cadherin related family member 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:105,876,750...106,036,432
Ensembl chr 7:105,876,796...106,036,432
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) MGI PMID:1719235 MGI:49235 NCBI chr19:42,507,306...42,528,482
Ensembl chr19:42,507,304...42,561,234
JBrowse link
G CLDN1 claudin 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:190,305,707...190,322,446
Ensembl chr 3:190,305,707...190,322,446
JBrowse link
G CLDN6 claudin 6 involved_in IEA GOC GO_REF:0000108 NCBI chr16:3,014,712...3,018,183
Ensembl chr16:3,014,712...3,020,071
JBrowse link
G CLDN9 claudin 9 involved_in IEA GOC GO_REF:0000108 NCBI chr16:3,012,923...3,014,505
Ensembl chr16:3,012,923...3,014,505
JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in IDA (PMID:16051304), (PMID:24623090) FlyBase PMID:16051304 PMID:24623090 NCBI chr19:7,728,957...7,732,110
Ensembl chr19:7,728,957...7,733,906
Ensembl chr19:7,728,957...7,733,906
JBrowse link
G CLEC4M C-type lectin domain family 4 member M involved_in IDA (PMID:24623090) FlyBase PMID:24623090 NCBI chr19:7,763,243...7,769,605
Ensembl chr19:7,763,149...7,769,605
Ensembl chr19:7,763,149...7,769,605
JBrowse link
G CLEC5A C-type lectin domain containing 5A involved_in IEA GOC GO_REF:0000108 NCBI chr 7:141,927,356...141,947,009
Ensembl chr 7:141,927,357...141,947,007
JBrowse link
G CR1 complement C3b/C4b receptor 1 (Knops blood group) involved_in IEA GOC GO_REF:0000108 NCBI chr 1:207,496,157...207,641,765
Ensembl chr 1:207,496,147...207,641,765
JBrowse link
G CR2 complement C3d receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:207,454,328...207,489,892
Ensembl chr 1:207,454,230...207,489,895
JBrowse link
G CTSB cathepsin B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:11,842,524...11,868,087
Ensembl chr 8:11,842,524...11,869,448
Ensembl chr 8:11,842,524...11,869,448
JBrowse link
G CTSL cathepsin L involved_in IDA (PMID:16339146), (PMID:18562523), (PMID:26953343), (PMID:32855215) UniProt PMID:16339146 PMID:18562523 PMID:26953343 PMID:32855215 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,726,109...87,731,469
Ensembl chr 9:87,726,109...87,731,469
JBrowse link
G CXADR CXADR Ig-like cell adhesion molecule involved_in IEA GOC GO_REF:0000108 NCBI chr21:17,513,016...17,636,213
Ensembl chr21:17,513,043...17,593,579
JBrowse link
G DAG1 dystroglycan 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:49,468,703...49,535,618
Ensembl chr 3:49,468,703...49,535,618
JBrowse link
G DPP4 dipeptidyl peptidase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:161,992,245...162,074,215
Ensembl chr 2:161,992,245...162,074,215
Ensembl chr 2:161,992,245...162,074,215
JBrowse link
G DYNLT1 dynein light chain Tctex-type 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:158,636,474...158,644,743
Ensembl chr 6:158,636,474...158,644,743
JBrowse link
G EFNB2 ephrin B2 involved_in IEA GOC GO_REF:0000108 NCBI chr13:106,489,745...106,535,662
Ensembl chr13:106,489,745...106,535,662
JBrowse link
G EFNB3 ephrin B3 involved_in IEA GOC GO_REF:0000108 NCBI chr17:7,705,202...7,711,372
Ensembl chr17:7,705,202...7,711,372
JBrowse link
G EGFR epidermal growth factor receptor involved_in TAS Reactome Reactome:R-HSA-9611147 Reactome:R-HSA-9611158 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:16,124,337...16,156,104
Ensembl chr 1:16,124,337...16,156,069
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in IMP (PMID:20202662) CACAO PMID:20202662 NCBI chr 1:51,354,263...51,519,275
Ensembl chr 1:51,354,263...51,519,266
JBrowse link
G F11R F11 receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 1:160,995,211...161,021,152
Ensembl chr 1:160,995,211...161,021,343
JBrowse link
G GAS6 growth arrest specific 6 involved_in IDA (PMID:21501828) UniProt PMID:21501828 NCBI chr13:113,820,549...113,864,076
Ensembl chr13:113,820,549...113,864,076
JBrowse link
G GPR15 G protein-coupled receptor 15 involved_in IDA (PMID:15650194) UniProt PMID:15650194 NCBI chr 3:98,531,978...98,534,681
Ensembl chr 3:98,531,978...98,534,681
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 involved_in IMP (PMID:23029581) CACAO PMID:23029581 NCBI chr11:67,266,420...67,286,556
Ensembl chr11:67,266,473...67,286,556
JBrowse link
G GYPA glycophorin A (MNS blood group) involved_in IEA GOC GO_REF:0000108 NCBI chr 4:144,109,303...144,140,854
Ensembl chr 4:144,109,303...144,140,751
JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:157,028,383...157,069,633
Ensembl chr 5:157,029,413...157,059,119
JBrowse link
G HSPA1A heat shock protein family A (Hsp70) member 1A involved_in IEA GOC GO_REF:0000108 NCBI chr 6:31,815,543...31,817,942
Ensembl chr 6:31,815,543...31,817,946
JBrowse link
G HSPA1B heat shock protein family A (Hsp70) member 1B involved_in IEA GOC GO_REF:0000108 NCBI chr 6:31,827,738...31,830,254
Ensembl chr 6:31,827,738...31,830,254
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A involved_in IEA GOC GO_REF:0000108 NCBI chr13:46,831,546...46,898,082
Ensembl chr13:46,831,550...46,897,076
Ensembl chr13:46,831,550...46,897,076
JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:50,299,889...50,312,951
Ensembl chr 3:50,299,890...50,312,381
JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISS
ISO
facilitates UniProt
RGD
PMID:12584308 GO_REF:0000024 RGD:633153 NCBI chr 3:50,317,802...50,322,768
Ensembl chr 3:50,317,790...50,322,782
JBrowse link
G HYAL3 hyaluronidase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:50,292,832...50,299,405
Ensembl chr 3:50,292,831...50,299,405
JBrowse link
G ICAM1 intercellular adhesion molecule 1 involved_in IEA GOC GO_REF:0000108 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615
JBrowse link
G IDE insulin degrading enzyme involved_in IEA GOC GO_REF:0000108 NCBI chr10:92,451,684...92,574,093
Ensembl chr10:92,451,684...92,574,093
Ensembl chr10:92,451,684...92,574,093
JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in TAS (PMID:12450395) UniProt PMID:12450395 NCBI chr20:34,363,273...34,511,773
Ensembl chr20:34,363,241...34,540,748
JBrowse link
G ITGA2 integrin subunit alpha 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:52,989,352...53,094,779
Ensembl chr 5:52,989,340...53,094,779
JBrowse link
G ITGA5 integrin subunit alpha 5 involved_in IEA GOC GO_REF:0000108 NCBI chr12:54,395,261...54,419,266
Ensembl chr12:54,395,261...54,419,266
JBrowse link
G ITGAV integrin subunit alpha V involved_in IMP
TAS
(PMID:25063885)
(PMID:10570297)
UniProt
BHF-UCL
PMID:10570297 PMID:25063885 NCBI chr 2:186,590,056...186,680,901
Ensembl chr 2:186,590,056...186,680,901
JBrowse link
G ITGB1 integrin subunit beta 1 involved_in TAS Reactome Reactome:R-HSA-9611147 Reactome:R-HSA-9611158 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,900,318...33,005,792
Ensembl chr10:32,900,318...33,005,792
JBrowse link
G ITGB3 integrin subunit beta 3 involved_in IMP (PMID:25063885) UniProt PMID:25063885 NCBI chr17:47,253,827...47,313,743
Ensembl chr17:47,253,846...47,313,735
Ensembl chr17:47,253,846...47,313,735
Ensembl chr17:47,253,846...47,313,735
JBrowse link
G ITGB5 integrin subunit beta 5 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:124,761,948...124,901,418
Ensembl chr 3:124,761,948...124,901,418
JBrowse link
G ITGB6 integrin subunit beta 6 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:160,099,671...160,200,272
Ensembl chr 2:160,099,667...160,200,313
JBrowse link
G ITGB7 integrin subunit beta 7 involved_in IEA GOC GO_REF:0000108 NCBI chr12:53,191,318...53,207,375
Ensembl chr12:53,191,323...53,207,282
JBrowse link
G KPNA3 karyopherin subunit alpha 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:49,699,307...49,792,682
Ensembl chr13:49,699,320...49,792,682
JBrowse link
G LAMP1 lysosomal associated membrane protein 1 involved_in IEA GOC GO_REF:0000108 NCBI chr13:113,297,239...113,323,672
Ensembl chr13:113,297,239...113,323,672
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 NOT|involved_in IMP (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr 3:183,122,215...183,162,761
Ensembl chr 3:183,122,215...183,163,839
JBrowse link
G LDLR low density lipoprotein receptor involved_in IEA GOC GO_REF:0000108 NCBI chr19:11,089,432...11,133,820
Ensembl chr19:11,089,462...11,133,820
Ensembl chr19:11,089,462...11,133,820
JBrowse link
G MOG myelin oligodendrocyte glycoprotein involved_in IEA GOC GO_REF:0000108 NCBI chr 6:29,657,092...29,672,365
Ensembl chr 6:29,657,002...29,672,372
JBrowse link
G MRC1 mannose receptor C-type 1 involved_in IEA GOC GO_REF:0000108 NCBI chr10:17,809,348...17,911,164
Ensembl chr10:17,809,348...17,911,164
JBrowse link
G NCAM1 neural cell adhesion molecule 1 involved_in IEA GOC GO_REF:0000108 NCBI chr11:112,961,420...113,278,436
Ensembl chr11:112,961,247...113,278,436
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in NAS
ISO
(PMID:12885915) UniProt
RGD
PMID:12584355 PMID:12885915 RGD:1599797 NCBI chr11:119,638,098...119,729,200
Ensembl chr11:119,623,408...119,729,200
JBrowse link
G NECTIN4 nectin cell adhesion molecule 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:161,070,998...161,089,566
Ensembl chr 1:161,070,998...161,089,558
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in IMP (PMID:21866101), (PMID:21866103) CACAO PMID:21866101 PMID:21866103 NCBI chr18:23,506,184...23,586,506
Ensembl chr18:23,506,184...23,586,506
JBrowse link
G NRP1 neuropilin 1 involved_in IDA (PMID:33000221), (PMID:33082294) UniProt PMID:33000221 PMID:33082294 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262
JBrowse link
G NUP153 nucleoporin 153 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:17,615,036...17,706,925
Ensembl chr 6:17,615,035...17,706,834
Ensembl chr 6:17,615,035...17,706,834
JBrowse link
G PHB prohibitin involved_in ISS UniProt GO_REF:0000024 NCBI chr17:49,404,052...49,414,882
Ensembl chr17:49,404,049...49,414,905
Ensembl chr17:49,404,049...49,414,905
JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:146,515,178...146,544,805
Ensembl chr 3:146,515,180...146,544,856
JBrowse link
G PVR PVR cell adhesion molecule involved_in IEA GOC GO_REF:0000108 NCBI chr19:44,643,910...44,666,162
Ensembl chr19:44,643,798...44,666,162
JBrowse link
G RPSA ribosomal protein SA involved_in IEA GOC GO_REF:0000108 NCBI chr 3:39,406,720...39,412,542
Ensembl chr 3:39,406,716...39,412,542
JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr12:124,776,856...124,863,864
Ensembl chr12:124,776,856...124,882,668
JBrowse link
G SCARB2 scavenger receptor class B member 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:76,158,737...76,213,824
Ensembl chr 4:76,158,737...76,234,536
JBrowse link
G SELPLG selectin P ligand involved_in IEA GOC GO_REF:0000108 NCBI chr12:108,621,895...108,633,894
Ensembl chr12:108,621,895...108,633,894
Ensembl chr12:108,621,895...108,633,894
JBrowse link
G SERPINB3 serpin family B member 3 involved_in IEA GOC GO_REF:0000108 NCBI chr18:63,655,197...63,661,893
Ensembl chr18:63,655,197...63,661,893
JBrowse link
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chr20:3,686,970...3,712,600
Ensembl chr20:3,686,970...3,707,128
Ensembl chr20:3,686,970...3,707,128
JBrowse link
G SIVA1 SIVA1 apoptosis inducing factor involved_in IEA GOC GO_REF:0000108 NCBI chr14:104,752,420...104,759,659
Ensembl chr14:104,753,147...104,768,494
JBrowse link
G SLAMF1 signaling lymphocytic activation molecule family member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:160,608,106...160,647,281
Ensembl chr 1:160,608,106...160,647,295
JBrowse link
G SLC10A1 solute carrier family 10 member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr14:69,775,416...69,797,241
Ensembl chr14:69,775,416...69,797,241
JBrowse link
G SLC1A5 solute carrier family 1 member 5 involved_in IEA GOC GO_REF:0000108 NCBI chr19:46,774,883...46,788,594
Ensembl chr19:46,774,883...46,788,594
JBrowse link
G SLC20A2 solute carrier family 20 member 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:42,416,475...42,542,143
Ensembl chr 8:42,416,475...42,541,926
JBrowse link
G SLC3A2 solute carrier family 3 member 2 involved_in IMP (PMID:30341327) UniProt PMID:30341327 NCBI chr11:62,856,109...62,888,860
Ensembl chr11:62,856,102...62,888,875
Ensembl chr11:62,856,102...62,888,875
JBrowse link
G SLC52A1 solute carrier family 52 member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr17:5,032,602...5,035,426
Ensembl chr17:5,032,600...5,052,009
JBrowse link
G SLC52A2 solute carrier family 52 member 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:144,358,547...144,361,272
Ensembl chr 8:144,333,957...144,361,286
Ensembl chr 8:144,333,957...144,361,286
JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in IDA (PMID:22573858) UniProt PMID:22573858 NCBI chr11:6,390,474...6,394,998
Ensembl chr11:6,390,440...6,394,998
JBrowse link
G TFRC transferrin receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 3:196,018,694...196,082,123
Ensembl chr 3:196,027,183...196,082,096
JBrowse link
G TNFRSF14 TNF receptor superfamily member 14 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:2,556,371...2,563,829
Ensembl chr 1:2,555,639...2,565,382
JBrowse link
G TNFRSF4 TNF receptor superfamily member 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:1,211,326...1,216,812
Ensembl chr 1:1,211,340...1,214,153
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr15:41,559,212...41,583,589
Ensembl chr15:41,557,675...41,583,589
JBrowse link
G UVRAG UV radiation resistance associated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr11:75,815,189...76,144,232
Ensembl chr11:75,815,210...76,144,232
JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within IMP (PMID:24550300) MGI PMID:24550300 NCBI chr 2:85,577,535...85,582,031
Ensembl chr 2:85,561,562...85,582,031
JBrowse link
G VPS16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr20:2,840,745...2,866,732
Ensembl chr20:2,840,703...2,866,732
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr15:40,894,410...40,903,975
Ensembl chr15:40,894,450...40,903,975
JBrowse link
G WWP1 WW domain containing E3 ubiquitin protein ligase 1 involved_in TAS (PMID:12450395) UniProt PMID:12450395 NCBI chr 8:86,342,547...86,468,503
Ensembl chr 8:86,342,547...86,478,420
JBrowse link
G WWP2 WW domain containing E3 ubiquitin protein ligase 2 involved_in TAS (PMID:12450395) UniProt PMID:12450395 NCBI chr16:69,762,301...69,941,741
Ensembl chr16:69,762,306...69,941,741
Ensembl chr16:69,762,306...69,941,741
JBrowse link
G XPR1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:180,632,022...180,890,279
Ensembl chr 1:180,632,022...180,890,279
JBrowse link
G ZNF639 zinc finger protein 639 involved_in IDA (PMID:20484494) UniProt PMID:20484494 NCBI chr 3:179,322,876...179,338,583
Ensembl chr 3:179,323,031...179,338,583
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:3,686,970...3,712,600
Ensembl chr20:3,686,970...3,707,128
Ensembl chr20:3,686,970...3,707,128
JBrowse link
fusion of virus membrane with host endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in IDA (PMID:16081529), (PMID:18562523) UniProt PMID:16081529 PMID:18562523 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,726,109...87,731,469
Ensembl chr 9:87,726,109...87,731,469
JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR5 C-C motif chemokine receptor 5 involved_in TAS Reactome Reactome:R-HSA-164524 NCBI chr 3:46,370,142...46,376,206
Ensembl chr 3:46,370,854...46,376,206
JBrowse link
G CD4 CD4 molecule involved_in TAS Reactome Reactome:R-HSA-164524 NCBI chr12:6,789,528...6,820,799
Ensembl chr12:6,786,858...6,820,799
JBrowse link
G CTSL cathepsin L involved_in IDA (PMID:32855215) UniProt PMID:32855215 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,726,109...87,731,469
Ensembl chr 9:87,726,109...87,731,469
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 involved_in TAS Reactome Reactome:R-HSA-164524 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,118,149
JBrowse link
G GAS6 growth arrest specific 6 involved_in IDA (PMID:21501828) UniProt PMID:21501828 NCBI chr13:113,820,549...113,864,076
Ensembl chr13:113,820,549...113,864,076
JBrowse link
G HYAL2 hyaluronidase 2 involved_in IDA (PMID:11296287) UniProt PMID:11296287 NCBI chr 3:50,317,802...50,322,768
Ensembl chr 3:50,317,790...50,322,782
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:12915581)
GO_Central
BHF-UCL
PMID:12915581 PMID:21873635 NCBI chr19:44,846,297...44,889,223
Ensembl chr19:44,846,175...44,889,223
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in TAS Reactome Reactome:R-HSA-164524 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum involved_in IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G CD74 CD74 molecule involved_in IDA (PMID:32855215) UniProt PMID:32855215 NCBI chr 5:150,400,041...150,412,936
Ensembl chr 5:150,400,041...150,412,929
Ensembl chr 5:150,400,041...150,412,929
JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in IDA (PMID:32855215) UniProt PMID:32855215 NCBI chr16:10,866,208...10,941,562
Ensembl chr16:10,866,222...10,943,021
JBrowse link
G FCN1 ficolin 1 involved_in IDA (PMID:22851708) UniProt PMID:22851708 NCBI chr 9:134,903,232...134,917,912
Ensembl chr 9:134,903,232...134,917,912
JBrowse link
G FCN3 ficolin 3 involved_in IMP (PMID:22851708) UniProt PMID:22851708 NCBI chr 1:27,369,110...27,374,852
Ensembl chr 1:27,369,110...27,374,824
Ensembl chr 1:27,369,110...27,374,824
JBrowse link
G GSN gelsolin involved_in IMP (PMID:23575248) UniProt PMID:23575248 NCBI chr 9:121,201,483...121,332,844
Ensembl chr 9:121,207,794...121,332,843
JBrowse link
G IFITM1 interferon induced transmembrane protein 1 involved_in
acts_upstream_of_or_within
IBA
IDA
ISO
(PMID:21873635)
(PMID:21253575), (PMID:23358889), (PMID:26354436)
(MGI:5780029|PMID:25738301)
GO_Central
UniProt
MGI
PMID:21253575 PMID:21873635 PMID:23358889 PMID:25738301 PMID:26354436 MGI:5780029 NCBI chr11:314,040...315,272
Ensembl chr11:313,506...315,272
Ensembl chr11:313,506...315,272
JBrowse link
G IFITM2 interferon induced transmembrane protein 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:21253575), (PMID:23358889), (PMID:26354436), (PMID:33563656)
GO_Central
UniProt
PMID:21253575 PMID:21873635 PMID:23358889 PMID:26354436 PMID:33563656 NCBI chr11:307,816...309,395
Ensembl chr11:307,631...315,272
Ensembl chr11:307,631...315,272
JBrowse link
G IFITM3 interferon induced transmembrane protein 3 involved_in IMP
IDA
IBA
(PMID:23358889)
(PMID:20943977), (PMID:21253575), (PMID:26354436)
(PMID:21873635)
CACAO
UniProt
GO_Central
PMID:20943977 PMID:21253575 PMID:21873635 PMID:23358889 PMID:26354436 NCBI chr11:319,676...320,860
Ensembl chr11:319,676...327,537
Ensembl chr11:319,676...327,537
JBrowse link
G IFNA2 interferon alpha 2 involved_in IDA (PMID:22783022) BHF-UCL PMID:22783022 NCBI chr 9:21,384,255...21,385,398
Ensembl chr 9:21,384,255...21,385,398
JBrowse link
G LY6E lymphocyte antigen 6 family member E involved_in IDA (PMID:32641482), (PMID:32704094) UniProt PMID:32641482 PMID:32704094 NCBI chr 8:143,018,529...143,022,409
Ensembl chr 8:143,017,982...143,023,832
JBrowse link
G MID2 midline 2 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr  X:107,825,735...107,931,637
Ensembl chr  X:107,825,755...107,927,193
Ensembl chr  X:107,825,755...107,927,193
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,578...94,493,908
Ensembl chr11:94,415,578...94,493,908
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr 8:89,933,331...89,984,698
Ensembl chr 8:89,933,336...90,003,228
Ensembl chr 8:89,933,336...90,003,228
JBrowse link
G PTX3 pentraxin 3 involved_in IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:157,436,850...157,443,633
Ensembl chr 3:157,436,850...157,443,633
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G SNX3 sorting nexin 3 involved_in IDA (PMID:18767904) UniProt PMID:18767904 NCBI chr 6:108,211,222...108,261,040
Ensembl chr 6:108,211,222...108,261,246
JBrowse link
G TRIM10 tripartite motif containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,151,939...30,163,216
Ensembl chr 6:30,151,943...30,161,211
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:228,393,672...228,406,835
Ensembl chr 1:228,393,673...228,406,835
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,887,909...56,914,049
Ensembl chr17:56,836,387...56,914,080
JBrowse link
G TRIM26 tripartite motif containing 26 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:30,184,453...30,213,435
Ensembl chr 6:30,184,455...30,213,427
JBrowse link
G TRIM31 tripartite motif containing 31 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:30,102,892...30,113,090
Ensembl chr 6:30,102,897...30,113,090
JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr11:5,590,906...5,685,108
Ensembl chr11:5,663,195...5,938,619
JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 7:101,085,424...101,097,967
Ensembl chr 7:101,085,481...101,097,967
JBrowse link
G TRIM59 tripartite motif containing 59 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:160,435,503...160,449,786
Ensembl chr 3:160,432,445...160,485,773
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:102,644,479...102,658,319
Ensembl chr10:102,644,479...102,658,318
Ensembl chr10:102,644,479...102,658,318
JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSG basigin (Ok blood group) involved_in IDA
IMP
(PMID:29739904)
(PMID:11353871), (PMID:15688292)
UniProt PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr19:571,283...583,493
Ensembl chr19:571,277...583,493
Ensembl chr19:571,277...583,493
JBrowse link
G CD4 CD4 molecule involved_in IDA (PMID:24942581) CAFA PMID:24942581 NCBI chr12:6,789,528...6,820,799
Ensembl chr12:6,786,858...6,820,799
JBrowse link
G CD74 CD74 molecule involved_in IDA (PMID:24942581) CAFA PMID:24942581 NCBI chr 5:150,400,041...150,412,936
Ensembl chr 5:150,400,041...150,412,929
Ensembl chr 5:150,400,041...150,412,929
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 involved_in IDA (PMID:24942581) CAFA PMID:24942581 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,578,769...32,589,848
JBrowse link
G LGALS1 galectin 1 involved_in IDA (PMID:21670307) UniProt PMID:21670307 NCBI chr22:37,675,636...37,679,802
Ensembl chr22:37,675,636...37,679,802
JBrowse link
G LGALS9 galectin 9 involved_in IDA (PMID:21670307) UniProt PMID:21670307 NCBI chr17:27,631,172...27,649,560
Ensembl chr17:27,629,798...27,649,560
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) AgBase PMID:11277703 NCBI chr11:119,638,098...119,729,200
Ensembl chr11:119,623,408...119,729,200
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta involved_in IMP (PMID:21670307) UniProt PMID:21670307 NCBI chr17:81,843,159...81,860,535
Ensembl chr17:81,843,161...81,860,624
Ensembl chr17:81,843,161...81,860,624
JBrowse link
G TMPRSS2 transmembrane serine protease 2 involved_in IDA (PMID:21068237), (PMID:24227843), (PMID:32404436) UniProt PMID:21068237 PMID:24227843 PMID:32404436 NCBI chr21:41,464,305...41,508,158
Ensembl chr21:41,464,305...41,531,116
Ensembl chr21:41,464,305...41,531,116
JBrowse link
G TMPRSS4 transmembrane serine protease 4 involved_in IDA (PMID:32404436) UniProt PMID:32404436 NCBI chr11:118,077,016...118,125,505
Ensembl chr11:118,077,012...118,121,890
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:228,393,672...228,406,835
Ensembl chr 1:228,393,673...228,406,835
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:4,384,897...4,393,702
Ensembl chr11:4,384,897...4,393,702
JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:25,962,723...25,991,231
Ensembl chr 6:25,962,802...25,991,231
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in IGI (PMID:21047970) CACAO PMID:21047970 NCBI chr 7:116,525,009...116,561,185
Ensembl chr 7:116,525,001...116,561,184
Ensembl chr 7:116,525,001...116,561,184
JBrowse link
G CAV2 caveolin 2 involved_in IGI (PMID:21047970) CACAO PMID:21047970 NCBI chr 7:116,499,738...116,508,541
Ensembl chr 7:116,287,380...116,508,541
JBrowse link
G CTSL cathepsin L involved_in IDA (PMID:16081529), (PMID:32221306), (PMID:32855215) UniProt PMID:16081529 PMID:32221306 PMID:32855215 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,726,109...87,731,469
Ensembl chr 9:87,726,109...87,731,469
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in IMP (PMID:21047970) CACAO PMID:21047970 NCBI chr 1:51,354,263...51,519,275
Ensembl chr 1:51,354,263...51,519,266
JBrowse link
G KIAA0319L KIAA0319 like acts_upstream_of_or_within ISO (MGI:5750797|PMID:26814968) MGI PMID:26814968 MGI:5750797 NCBI chr 1:35,433,490...35,557,603
Ensembl chr 1:35,433,492...35,557,950
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IDA (PMID:32221306) UniProt PMID:32221306 NCBI chr 2:208,266,178...208,358,747
Ensembl chr 2:208,266,255...208,358,746
JBrowse link
G TPCN2 two pore segment channel 2 involved_in IDA (PMID:32221306) UniProt PMID:32221306 NCBI chr11:69,048,932...69,090,597
Ensembl chr11:69,048,932...69,136,316
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC104389.5 novel transcript involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr11:5,254,392...5,678,434 JBrowse link
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in IDA (PMID:12138164) UniProt PMID:12138164 NCBI chr 6:114,055,586...114,343,023
Ensembl chr 6:114,055,586...114,343,045
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:11602758)
GO_Central
CACAO
PMID:11602758 PMID:21873635 NCBI chr19:44,846,297...44,889,223
Ensembl chr19:44,846,175...44,889,223
JBrowse link
G TRIM14 tripartite motif containing 14 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:98,072,014...98,119,420
Ensembl chr 9:98,069,275...98,119,222
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:4,384,897...4,393,702
Ensembl chr11:4,384,897...4,393,702
JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:5,689,790...5,710,863
Ensembl chr11:5,689,697...5,737,089
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr17:56,887,909...56,914,049
Ensembl chr17:56,836,387...56,914,080
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:28,903,002...28,923,985
Ensembl chr 6:28,903,002...28,923,988
JBrowse link
G TRIM34 tripartite motif containing 34 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:5,619,944...5,644,398
Ensembl chr11:5,619,764...5,644,398
JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:25,962,723...25,991,231
Ensembl chr 6:25,962,802...25,991,231
JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:5,590,906...5,685,108
Ensembl chr11:5,663,195...5,938,619
JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:5,596,111...5,612,952
Ensembl chr11:5,596,109...5,612,958
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:33,145,399...33,184,774
Ensembl chr 1:33,145,399...33,182,059
JBrowse link
G TRIM68 tripartite motif containing 68 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:4,598,672...4,608,231
Ensembl chr11:4,598,672...4,608,231
JBrowse link
G TRIML1 tripartite motif family like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:188,137,229...188,150,768
Ensembl chr 4:188,139,441...188,147,743
JBrowse link
G TRIML2 tripartite motif family like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:188,091,255...188,109,603
Ensembl chr 4:188,091,273...188,109,603
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18673
    viral process 667
      viral life cycle 403
        viral entry into host cell 155
          disruption of host cell envelope during viral entry + 0
          endocytosis involved in viral entry into host cell + 8
          lysis of host organelle involved in viral entry into host cell + 0
          membrane fusion involved in viral entry into host cell + 8
          negative regulation of viral entry into host cell + 26
          pore-mediated entry of viral genome into host cell 0
          positive regulation of viral entry into host cell + 13
          regulation of viral entry into host cell + 49
          viral entry into host cell via pilus retraction + 0
          viral entry via permeabilization of host membrane + 0
          viral genome ejection through host cell envelope + 0
Path 2
Term Annotations click to browse term
  biological_process 18673
    biological process involved in interspecies interaction between organisms 2108
      biological process involved in symbiotic interaction 371
        biological process involved in interaction with host 260
          movement in host environment 193
            entry into host 168
              viral entry into host cell 155
                disruption of host cell envelope during viral entry + 0
                endocytosis involved in viral entry into host cell + 8
                lysis of host organelle involved in viral entry into host cell + 0
                membrane fusion involved in viral entry into host cell + 8
                negative regulation of viral entry into host cell + 26
                pore-mediated entry of viral genome into host cell 0
                positive regulation of viral entry into host cell + 13
                regulation of viral entry into host cell + 49
                viral entry into host cell via pilus retraction + 0
                viral entry via permeabilization of host membrane + 0
                viral genome ejection through host cell envelope + 0
paths to the root