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ONTOLOGY REPORT - ANNOTATIONS


Term:heterocycle catabolic process
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Accession:GO:0046700 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
Synonyms:exact_synonym: heterocycle breakdown;   heterocycle catabolism;   heterocycle degradation


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10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,585...53,794,706
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:103,675,164...103,871,245
Ensembl chr14:103,675,175...103,871,227
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,790...94,350,312
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:142,384,526...142,387,407
Ensembl chr 2:142,384,532...142,387,199
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:28275056)
(PMID:16126846)
CACAO
UniProt
PMID:16126846 PMID:28275056 NCBI chr 2:72,656,951...72,668,854
Ensembl chr 2:72,656,951...72,668,964
JBrowse link
G KLHL17 kelch like family member 17 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:63,320,898...63,328,093
Ensembl chr 6:63,322,184...63,336,139
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:107,738,089...107,763,873
Ensembl chr 4:107,738,112...107,763,596
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,328,054...63,336,140
Ensembl chr 6:63,322,314...63,336,140
JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,513...4,883,768
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:116,204,807...116,292,455
Ensembl chr 9:116,209,094...116,292,366
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,762,043...18,835,788
Ensembl chr13:18,761,445...18,830,563
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,015...59,013,495
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,195
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr 1:16,463,532...16,498,974
Ensembl chr 1:16,465,252...16,498,971
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,011...92,495,574
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,406...97,204,700
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGEL2 angel homolog 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:130,453,912...130,476,383
Ensembl chr 9:130,453,920...130,474,921
JBrowse link
G BOLL boule homolog, RNA binding protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:101,535,392...101,602,232
Ensembl chr15:101,535,703...101,602,233
JBrowse link
G DAZL deleted in azoospermia like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:3,762,896...3,783,848 JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,124...71,248,916
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:161,784,146...161,928,953
Ensembl chr 6:161,786,352...161,928,910
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chr 2:139,779,865...139,783,016
Ensembl chr 2:139,779,867...139,783,159
JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) UniProt PMID:16010978 NCBI chr 7:77,921,098...77,978,550
Ensembl chr 7:77,921,141...77,969,914
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,061
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:22,976,951...22,979,568
Ensembl chr13:22,964,071...22,983,109
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr 2:77,551,562...77,563,153
Ensembl chr 2:77,551,563...77,563,107
JBrowse link
G RBM10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367529|PMID:19508861) Ensembl
MGI
PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:41,773,232...41,803,656
Ensembl chr  X:41,773,232...41,803,662
JBrowse link
G RBM38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chr17:57,783,156...57,802,495
Ensembl chr17:57,783,154...57,797,997
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,374,559...53,394,172
Ensembl chr 9:53,375,642...53,394,165
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
5-methylcytosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET1 tet methylcytosine dioxygenase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr14:71,675,671...71,812,732
Ensembl chr14:71,675,671...71,815,621
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr 8:116,413,253...116,546,976
Ensembl chr 8:116,415,267...116,545,299
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 involved_in IEA UniProt GO_REF:0000104 NCBI chr 3:68,918,896...69,020,406
Ensembl chr 3:68,918,933...69,020,986
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2137102|PMID:11415433) Ensembl
MGI
PMID:11415433 GO_REF:0000107 MGI:2137102 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:8894685)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
(MGI:1861066|PMID:10899903), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377)
(MGI:2151677|PMID:11591798), (MGI:3531253|PMID:8663040)
(MGI:74163|PMID:7670465)
(PMID:21873635)
Ensembl
MGI
GO_Central
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 PMID:7731963 PMID:8663040 PMID:8894685 PMID:9272950 PMID:9478961 PMID:10720488 PMID:10899903 PMID:11591798 PMID:14607964 PMID:15630442 PMID:16841096 PMID:18340377 PMID:21873635 GO_REF:0000107 MGI:1095761 MGI:1861066 MGI:2151677 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:49990 MGI:59127 MGI:72798 MGI:74163 MGI:76875 MGI:83255 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G ADA2 adenosine deaminase 2 involved_in IBA
ISS
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr 5:69,526,413...69,554,640
Ensembl chr 5:69,526,434...69,554,661
JBrowse link
G ADAL adenosine deaminase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:128,089,422...128,125,691
Ensembl chr 1:128,089,500...128,125,967
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr 2:49,026,695...49,084,982
Ensembl chr 2:49,028,923...49,083,590
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO (MGI:3760051|PMID:17502665) MGI PMID:17502665 MGI:3760051 NCBI chr14:107,263,546...107,390,923
Ensembl chr14:107,263,449...107,506,052
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
G NUDT9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chr 8:131,436,245...131,472,984 JBrowse link
aflatoxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSTA1 glutathione S-transferase alpha 1 acts_upstream_of_or_within ISO (MGI:4429761|PMID:19850059) MGI PMID:19850059 MGI:4429761 NCBI chr 7:46,538,743...46,550,781
Ensembl chr 7:46,538,032...46,567,728
JBrowse link
G NFE2L2 nuclear factor, erythroid 2 like 2 ISO RGD PMID:27071940 RGD:12910550 NCBI chr15:82,967,485...83,146,185
Ensembl chr15:82,973,648...83,146,183
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr 2:49,026,695...49,084,982
Ensembl chr 2:49,028,923...49,083,590
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr 6:95,473,259...95,497,645
Ensembl chr 6:95,473,261...95,497,000
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3770326|PMID:16547283)
GO_Central
MGI
RGD
PMID:16547283 PMID:21414400 PMID:21873635 MGI:3770326 RGD:5134346 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:70,725,403...70,736,264
Ensembl chr 6:70,724,587...70,736,236
JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:15572351)
(PMID:21873635)
InterPro
MGI
RGD
GO_Central
PMID:11425895 PMID:15572351 PMID:21873635 GO_REF:0000002 RGD:628524 NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,863...65,323,816
JBrowse link
G DICER1 dicer 1, ribonuclease III involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2385551|PMID:12050166)
GO_Central
MGI
PMID:12050166 PMID:21873635 MGI:2385551 NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,954,804...39,975,946
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
JBrowse link
G ENDOG endonuclease G involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3029597|PMID:14663139)
GO_Central
MGI
PMID:14663139 PMID:21873635 MGI:3029597 NCBI chr 1:269,153,955...269,157,789
Ensembl chr 1:269,154,090...269,157,788
JBrowse link
G EXOG exo/endonuclease G involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:23,278,458...23,330,540
Ensembl chr13:23,278,932...23,322,541
JBrowse link
G FOXL2 forkhead box L2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:79,708,693...79,709,825
Ensembl chr13:79,709,013...79,709,825
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE4A phosphodiesterase 4A involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:69,225,403...69,268,327
Ensembl chr 2:69,225,395...69,267,971
JBrowse link
G PDE4B phosphodiesterase 4B involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:146,167,262...146,720,105
Ensembl chr 6:146,166,681...146,720,127
JBrowse link
G PDE4C phosphodiesterase 4C involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:59,567,644...59,598,398 JBrowse link
G PDE4D phosphodiesterase 4D involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr16:37,897,300...39,406,534
Ensembl chr16:37,897,300...39,154,586
JBrowse link
G PDE8A phosphodiesterase 8A involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:52,410,766...52,558,482
Ensembl chr 7:52,410,779...52,556,884
JBrowse link
G PDE8B phosphodiesterase 8B involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:86,007,190...86,323,796 JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr15:87,619,049...87,965,068
Ensembl chr15:87,440,916...87,964,202
JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISS
IBA
IEA
(PMID:21873635) UniProt
GO_Central
Ensembl
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:7,136,637...7,227,966
Ensembl chr 9:7,136,644...7,227,964
JBrowse link
G PDE5A phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:2450821 NCBI chr 8:104,270,858...104,420,955
Ensembl chr 8:104,270,881...104,420,947
JBrowse link
G PDE9A phosphodiesterase 9A involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:205,938,342...206,034,981
Ensembl chr13:205,938,334...206,034,981
JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
G UPP2 uridine phosphorylase 2 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr15:65,088,652...65,131,739
Ensembl chr15:65,088,284...65,131,789
JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUBN cubilin ISO RGD PMID:14576052 RGD:8554807 NCBI chr10:43,102,931...43,414,692
Ensembl chr10:43,102,946...43,414,613
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:2137102|PMID:11415433)
GO_Central
MGI
Ensembl
PMID:11415433 PMID:21873635 GO_REF:0000107 MGI:2137102 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
coumarin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON3 paraoxonase 3 ISO RGD PMID:12946270 RGD:1303961 NCBI chr 9:74,983,040...75,017,947
Ensembl chr 9:74,991,277...75,017,942
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,093,667...124,185,352
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,475,270...17,497,130
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,196,969...25,243,272
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,113...54,598,407
JBrowse link
G YBX1 Y-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,789...168,736,604
JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:110,827,833...110,877,972
Ensembl chr14:110,827,914...110,882,575
JBrowse link
CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,046,040...45,075,973
Ensembl chr11:45,044,508...45,075,910
JBrowse link
G EXOSC10 exosome component 10 involved_in ISO (PMID:19056938) UniProt PMID:19056938 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in IEA UniProt GO_REF:0000104 NCBI chr12:20,758,081...20,765,655
Ensembl chr12:20,758,081...20,776,868
JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA Ensembl
GOC
GO_REF:0000107 GO_REF:0000108 NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,483
JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173
JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:36,364,258...36,381,012
Ensembl chr 7:36,364,300...36,384,299
JBrowse link
G CDA cytidine deaminase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:675715 PMID:21873635 RGD:2316616 NCBI chr 6:78,824,248...78,849,154
Ensembl chr 6:78,824,284...78,879,462
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:18,467,508...18,518,137
Ensembl chr11:18,458,299...18,518,146
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr 6:95,473,259...95,497,645
Ensembl chr 6:95,473,261...95,497,000
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,446,997
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964)
(MGI:74163|PMID:7670465)
(MGI:76875|PMID:7592575)
(MGI:72798|PMID:7731963)
Ensembl
MGI
PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 GO_REF:0000107 MGI:2155238 MGI:3619310 MGI:72798 MGI:74163 MGI:76875 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,112,978...40,171,895
JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:73237|PMID:7744869) MGI PMID:7744869 MGI:73237 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
G UPP2 uridine phosphorylase 2 involved_in ISO (PMID:12849978) MGI PMID:12849978 NCBI chr15:65,088,652...65,131,739
Ensembl chr15:65,088,284...65,131,789
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G DCP1A decapping mRNA 1A involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,392,510...35,479,703
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,648
JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 9:53,400,750...53,437,161
Ensembl chr 9:53,400,753...53,437,548
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:48,348,653...48,360,004
Ensembl chr15:48,347,864...48,385,464
JBrowse link
G NOCT nocturnin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr11:5,487,019...5,614,458
Ensembl chr11:5,486,889...5,614,454
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 2:11,826,816...11,857,699
Ensembl chr 2:11,827,799...11,857,699
JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:126,890,464...126,998,014
Ensembl chr 1:126,890,892...126,998,059
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP1A decapping mRNA 1A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,392,510...35,479,703
JBrowse link
G DCP1B decapping mRNA 1B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
JBrowse link
G EDC3 enhancer of mRNA decapping 3 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:58,828,693...58,895,475
Ensembl chr 7:58,828,726...58,897,923
JBrowse link
G EDC4 enhancer of mRNA decapping 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:28,489,427...28,501,511
Ensembl chr 6:28,489,422...28,501,512
JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:74163|PMID:7670465)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:76875|PMID:7592575)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488)
Ensembl
MGI
PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 PMID:10720488 PMID:14607964 GO_REF:0000107 MGI:1095761 MGI:2155238 MGI:3619310 MGI:3640719 MGI:72798 MGI:74163 MGI:76875 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,446,997
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:225,425,389...225,589,835
Ensembl chr 1:225,402,117...225,589,830
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,446,997
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,590,982...56,706,479
Ensembl chr 5:56,590,978...56,706,458
JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:38,263,819...38,267,361
Ensembl chr 7:38,263,820...38,266,695
JBrowse link
deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase involved_in IEA UniProt GO_REF:0000104 NCBI chr17:32,458,351...32,474,827
Ensembl chr17:32,455,459...32,474,786
JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 5:56,590,982...56,706,479
Ensembl chr 5:56,590,978...56,706,458
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic acts_upstream_of_or_within ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:23601106), (PMID:26294762) UniProt PMID:23601106 PMID:26294762 NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,112,978...40,171,895
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:225,425,389...225,589,835
Ensembl chr 1:225,402,117...225,589,830
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr 6:95,473,259...95,497,645
Ensembl chr 6:95,473,261...95,497,000
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407) MGI PMID:5560407 MGI:6478530 NCBI chr14:114,062,451...114,167,460
Ensembl chr14:114,062,457...114,168,204
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr11:19,572,963...19,584,565
Ensembl chr11:19,572,644...19,584,538
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,112,978...40,171,895
JBrowse link
diadenosine hexaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
diadenosine pentaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
diadenosine triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FHIT fragile histidine triad diadenosine triphosphatase involved_in IEA
ISO
IBA
(PMID:21873635) Ensembl
RGD
GO_Central
PMID:16359767 PMID:21873635 GO_REF:0000107 RGD:2289929 NCBI chr13:41,443,963...42,884,799
Ensembl chr13:41,443,965...42,228,680
JBrowse link
dibenzo-p-dioxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO 2,3,7,8-tetrachlorodibenzo-p-dioxin RGD PMID:12914780 PMID:15812643 RGD:2306662 RGD:2306673 NCBI chr 7:58,802,887...58,809,155
Ensembl chr 7:58,780,105...58,809,755
JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 acts_upstream_of_or_within ISO (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,122,541...1,128,041
JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFB DNA fragmentation factor subunit beta involved_in ISO (PMID:19944011) CAFA PMID:19944011 NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,863...65,323,816
JBrowse link
G DNASE1 deoxyribonuclease 1 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 3:38,590,045...38,646,852
Ensembl chr 3:38,586,600...38,646,834
JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr  X:124,931,410...124,937,569
Ensembl chr  X:124,931,408...124,939,965
JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within ISO (MGI:5308183|PMID:21307874) MGI PMID:21307874 MGI:5308183 NCBI chr 3:39,757,725...39,761,497 JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,954,804...39,975,946
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal acts_upstream_of_or_within ISO (MGI:3521632|PMID:15568025) MGI PMID:15568025 MGI:3521632 NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:4848004|PMID:20871604)
(MGI:5637600|PMID:25848017)
(MGI:3834787|PMID:18724932), (MGI:4414715|PMID:19923437), (MGI:5562498|PMID:23993650)
MGI PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 MGI:3834787 MGI:4414715 MGI:4848004 MGI:5562498 MGI:5637600 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,178,601...31,180,592
JBrowse link
DNA catabolic process, endonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNASE1 deoxyribonuclease 1 involved_in ISS
IBA
(PMID:29191910)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:29191910 NCBI chr 3:38,590,045...38,646,852
Ensembl chr 3:38,586,600...38,646,834
JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:124,931,410...124,937,569
Ensembl chr  X:124,931,408...124,939,965
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,954,804...39,975,946
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal acts_upstream_of_or_within ISO (MGI:3818215|PMID:18991290) MGI PMID:18991290 MGI:3818215 NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
JBrowse link
G FBH1 F-box DNA helicase 1 acts_upstream_of_or_within ISO (PMID:23361013) MGI PMID:23361013 NCBI chr10:65,060,714...65,108,975
Ensembl chr10:64,955,189...65,108,380
JBrowse link
G LOC100514009 histone-lysine N-methyltransferase SETMAR involved_in ISO (PMID:20521842), (PMID:21491884)
(PMID:24573677)
UniProt PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr13:60,914,412...60,933,064 JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within ISO (PMID:23361013) MGI PMID:23361013 NCBI chr 2:6,462,825...6,470,780
Ensembl chr 2:6,463,413...6,469,112
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:273,011,736...273,021,956
Ensembl chr 1:273,011,733...273,021,940
JBrowse link
DNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISG20 interferon stimulated exonuclease gene 20 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:191,155,853...191,195,601
Ensembl chr 1:191,183,374...191,195,475
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:273,011,736...273,021,956
Ensembl chr 1:273,011,733...273,021,940
JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,178,601...31,180,592
JBrowse link
G XRN2 5'-3' exoribonuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,107,641...29,193,500
Ensembl chr17:29,107,668...29,193,494
JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,550,405...71,607,067
Ensembl chr14:71,549,815...71,651,089
JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 2:9,752,004...9,756,863
Ensembl chr 2:9,752,751...9,753,893
JBrowse link
G RNASEH1 ribonuclease H1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:131,268,908...131,277,072 JBrowse link
G RNASEH2A ribonuclease H2 subunit A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:66,192,785...66,208,417
Ensembl chr 2:66,193,192...66,208,478
JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:2183137|PMID:12077348) MGI PMID:12077348 MGI:2183137 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2388903|PMID:12234672) Ensembl
MGI
PMID:12234672 GO_REF:0000107 MGI:2388903 NCBI chr12:60,979,496...60,994,577
Ensembl chr12:60,979,499...60,994,582
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:6478539|PMID:14154460) MGI PMID:14154460 MGI:6478539 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:1315924 PMID:3032103 PMID:21873635 GO_REF:0000104 RGD:2300191 RGD:2301218 NCBI chr 1:123,451,207...123,462,267
Ensembl chr 1:123,451,212...123,462,232
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,131,236...78,202,518
Ensembl chr 2:78,124,269...78,202,535
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr16:68,329,785...68,352,020
Ensembl chr16:68,313,884...68,350,261
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
G EXOSC5 exosome component 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,373,378...49,381,875
Ensembl chr 6:49,373,378...49,382,180
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,787...28,208,935
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:12,817,081...12,825,847
Ensembl chr11:12,817,110...12,825,847
JBrowse link
G EXOSC9 exosome component 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:102,265,656...102,278,179
Ensembl chr 8:102,264,470...102,303,842
JBrowse link
fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FITM2 fat storage inducing transmembrane protein 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:46,742,662...46,745,898
Ensembl chr17:46,739,188...46,745,984
JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,796,446...235,876,321
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102167410 5-formyltetrahydrofolate cyclo-ligase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chr 7:48,717,518...48,873,492 JBrowse link
G PM20D2 peptidase M20 domain containing 2 NOT|involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:57,188,019...57,219,243
Ensembl chr 1:57,188,535...57,219,233
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,565,610...7,604,464
Ensembl chr14:7,565,604...7,594,057
JBrowse link
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:225,425,389...225,589,835
Ensembl chr 1:225,402,117...225,589,830
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr  X:110,321,144...110,357,902
Ensembl chr  X:110,321,208...110,357,899
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 NOT|involved_in ISO (PMID:21054786) UniProt PMID:21054786 NCBI chr10:50,365,654...50,458,487
Ensembl chr10:50,365,786...50,463,271
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
guanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:225,425,389...225,589,835
Ensembl chr 1:225,402,117...225,589,830
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
heme catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLVRA biliverdin reductase A involved_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr18:51,131,576...51,185,493
Ensembl chr18:51,121,946...51,185,437
JBrowse link
G BLVRB biliverdin reductase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,715,540...48,728,433
Ensembl chr 6:48,715,216...48,728,414
JBrowse link
G HMOX1 heme oxygenase 1 involved_in ISS
ISO
IBA
(PMID:21873635) AgBase
RGD
GO_Central
PMID:15226268 PMID:21873635 GO_REF:0000024 RGD:1547877
G HMOX2 heme oxygenase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:37,829,044...37,868,163
Ensembl chr 3:37,831,434...37,868,128
JBrowse link
heme oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 involved_in ISS
IBA
(PMID:21873635) AgBase
GO_Central
PMID:21873635 GO_REF:0000024
G HMOX2 heme oxygenase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr 3:37,829,044...37,868,163
Ensembl chr 3:37,831,434...37,868,128
JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNMT histamine N-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,733,412...13,768,106
Ensembl chr15:13,732,680...13,768,199
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,554
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,648
JBrowse link
G ERI1 exoribonuclease 1 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr15:56,091,790...56,123,520
Ensembl chr15:56,093,581...56,123,510
JBrowse link
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G EXOSC4 exosome component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:618,993...621,336
Ensembl chr 4:618,988...621,343
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr15:48,348,653...48,360,004
Ensembl chr15:48,347,864...48,385,464
JBrowse link
G MTPAP mitochondrial poly(A) polymerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:40,764,098...40,869,608
Ensembl chr10:40,764,362...40,872,854
JBrowse link
G TENT2 terminal nucleotidyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,254,320...88,502,342
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,597,636...34,759,216
JBrowse link
G TUT1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 2:9,148,563...9,161,918 JBrowse link
G TUT4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,655,627...159,793,758
JBrowse link
G TUT7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr10:28,995,564...29,061,179
Ensembl chr10:28,995,565...29,061,176
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,015...59,013,495
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,063,810...83,174,497
Ensembl chr13:83,065,934...83,174,537
JBrowse link
hypoxanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XDH xanthine dehydrogenase involved_in ISO
IEA
RGD
Ensembl
PMID:232638 GO_REF:0000107 RGD:13210503 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,122,541...1,128,041
JBrowse link
G NUDT9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chr 8:131,436,245...131,472,984 JBrowse link
IMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr 6:95,473,259...95,497,645
Ensembl chr 6:95,473,261...95,497,000
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:21873433) MGI PMID:21873433 NCBI chr14:114,062,451...114,167,460
Ensembl chr14:114,062,457...114,168,204
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,446,997
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16964310) Ensembl
MGI
PMID:16964310 GO_REF:0000107 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,446,997
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5009783|PMID:20081199) Ensembl
MGI
PMID:20081199 GO_REF:0000107 MGI:5009783 NCBI chr17:32,458,351...32,474,827
Ensembl chr17:32,455,459...32,474,786
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:67,152,428...67,254,097
Ensembl chr 6:67,152,428...67,254,103
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLYCD malonyl-CoA decarboxylase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:4,683,386...4,698,698
Ensembl chr 6:4,681,664...4,698,661
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:67,152,428...67,254,097
Ensembl chr 6:67,152,428...67,254,103
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,558...132,959,793
JBrowse link
G LIN28A lin-28 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:83,806,178...83,818,550
Ensembl chr 6:83,806,122...83,818,631
JBrowse link
G LIN28B lin-28 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:71,173,291...71,296,131
Ensembl chr 1:71,166,786...71,296,861
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,505
JBrowse link
G SND1 staphylococcal nuclease and tudor domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:20,261,473...20,653,621
Ensembl chr18:20,261,476...20,653,590
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:25049417) UniProt PMID:25049417 NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,597,636...34,759,216
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,655,627...159,793,758
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,395,517...39,402,653
Ensembl chr13:39,395,541...39,402,650
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,277,049
JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,277,049
JBrowse link
mitochondrial ncRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,277,049
JBrowse link
mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:18501193) UniProt PMID:18501193 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
mitochondrial RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,277,049
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO3 argonaute RISC catalytic component 3 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chr 6:92,081,763...92,225,811
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G AGO4 argonaute RISC component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
JBrowse link
G CNOT10 CCR4-NOT transcription complex subunit 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:18,649,725...18,736,075
Ensembl chr13:18,649,746...18,736,075
JBrowse link
G CNOT9 CCR4-NOT transcription complex subunit 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:120,590,354...120,622,203
Ensembl chr15:120,590,641...120,669,825
JBrowse link
G DCP2 decapping mRNA 2 involved_in ISO (PMID:21070968), (PMID:28002401)
(MGI:4849882|PMID:21070968)
UniProt PMID:21070968 PMID:28002401 MGI:4849882 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,648
JBrowse link
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,558...132,959,793
JBrowse link
G DXO decapping exoribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,057,670...24,060,108
Ensembl chr 7:24,050,397...24,059,997
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5439239|PMID:22844247) Ensembl
MGI
PMID:22844247 GO_REF:0000107 MGI:5439239 NCBI chr 2:72,656,951...72,668,854
Ensembl chr 2:72,656,951...72,668,964
JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 7:23,900,385...23,908,523
Ensembl chr 7:23,900,395...23,908,490
JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr18:40,752,390...40,755,909
Ensembl chr18:40,752,452...40,756,438
JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 8:82,409,170...82,428,501
Ensembl chr 8:82,409,181...82,428,416
JBrowse link
G METTL14 methyltransferase like 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
JBrowse link
G METTL16 methyltransferase like 16 involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,337
JBrowse link
G METTL3 methyltransferase like 3 involved_in ISO (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,948
JBrowse link
G MIRLET7C microRNA let-7c acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr13:181,303,209...181,303,302
Ensembl chr13:181,303,209...181,303,302
JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,218,889...52,219,834
Ensembl chr 6:52,219,418...52,219,834
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISO (MGI:6368680|PMID:31101919) UniProt PMID:31101919 MGI:6368680 NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,044,948...109,059,624
JBrowse link
G NUDT16 nudix hydrolase 16 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,122,541...1,128,041
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:38,656,270...38,665,863
Ensembl chr 4:38,656,319...38,670,999
JBrowse link
G SLFN14 schlafen family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,947,791...39,962,823
Ensembl chr12:39,950,505...39,964,565
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:85,717,147...85,756,750
Ensembl chr 6:85,716,917...85,751,583
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5567042|PMID:24415781)
GO_Central
MGI
PMID:21873635 PMID:24415781 MGI:5567042 NCBI chr 1:16,463,532...16,498,974
Ensembl chr 1:16,465,252...16,498,971
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:10330172), (PMID:20221403)
(PMID:10751406), (PMID:11782475)
UniProt
MGI
PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5320815|PMID:22367205) UniProt PMID:22367205 MGI:5320815 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,406...97,204,700
JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:49288|PMID:1370712) Ensembl
MGI
PMID:1370712 GO_REF:0000107 MGI:49288 NCBI chr 4:16,374,900...16,553,859
Ensembl chr 4:16,374,900...16,553,012
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr 2:15,066,518...15,161,478
Ensembl chr 2:15,066,537...15,187,797
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 8:73,191,721...73,335,779
Ensembl chr 8:73,185,999...73,335,741
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,707
JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:133,180,638...133,313,307
Ensembl chr15:133,180,663...133,313,320
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:81,203,067...81,239,823
Ensembl chr 6:81,184,833...81,239,135
JBrowse link
G METTL14 methyltransferase like 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
JBrowse link
G METTL16 methyltransferase like 16 involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,337
JBrowse link
G METTL3 methyltransferase like 3 involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 PMID:28965759 MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,948
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:87,546,388...87,687,483
Ensembl chr 6:87,547,320...87,687,442
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:38,656,270...38,665,863
Ensembl chr 4:38,656,319...38,670,999
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,903...106,314,944
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,353,119...125,491,963
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:62,329,302...62,341,312
Ensembl chr17:62,329,302...62,341,509
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 6:85,717,147...85,756,750
Ensembl chr 6:85,716,917...85,751,583
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 4:70,887,101...70,928,839
Ensembl chr 4:70,887,103...70,928,808
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3057047|PMID:15480992) Ensembl
MGI
PMID:15480992 GO_REF:0000107 MGI:3057047 NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173
JBrowse link
G AXIN2 axin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,293...12,343,200
JBrowse link
G CIRBP cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538 NCBI chr 2:77,185,295...77,194,373
Ensembl chr 2:77,047,910...77,200,559
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:142,384,526...142,387,407
Ensembl chr 2:142,384,532...142,387,199
JBrowse link
G E2F1 E2F transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,178,587...37,190,118
Ensembl chr17:37,178,598...37,189,841
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:48,156,835...48,204,701
Ensembl chr14:48,156,727...48,204,926
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19029303)
(PMID:21613615)
(PMID:31358969)
(MGI:5559905|PMID:24394384)
(MGI:5922838|PMID:27609837)
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615)
UniProt
MGI
CACAO
PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 PMID:31358969 MGI:3037407 MGI:5287957 MGI:5559905 MGI:5922838 NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,124...71,248,916
JBrowse link
G FUS FUS RNA binding protein acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chr 3:17,314,936...17,326,663
Ensembl chr 3:17,314,332...17,326,637
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,601...22,965,886
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:15192077 RGD:1357938 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) UniProt PMID:17174306 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,475,270...17,497,130
JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:67,123,055...67,147,991
Ensembl chr 9:67,123,265...67,147,992
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) UniProt PMID:25940091 PMID:28673543 NCBI chr16:68,390,879...68,451,605
Ensembl chr16:68,390,875...68,484,918
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO (MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:2158083 NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,061
JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:18,652,582...18,663,227
Ensembl chr12:18,652,493...18,671,909
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G QKI QKI, KH domain containing RNA binding ISO RGD PMID:16855020 RGD:10045995 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,513...4,883,768
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RBM46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (MGI:5644240|PMID:25397698) MGI PMID:25397698 MGI:5644240 NCBI chr 8:74,337,324...74,383,044
Ensembl chr 8:74,311,884...74,382,516
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:85148|PMID:9009318) Ensembl
MGI
PMID:9009318 GO_REF:0000107 MGI:85148 NCBI chr15:120,434,100...120,446,396
Ensembl chr15:120,433,952...120,446,396
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr12:34,278,363...34,282,164
Ensembl chr12:34,272,068...34,282,137
JBrowse link
G TAF15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chr12:39,687,171...39,716,761
Ensembl chr12:39,686,884...39,724,769
JBrowse link
G TENT5A terminal nucleotidyltransferase 5A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:84,545,033...84,552,138
Ensembl chr 1:84,545,201...84,552,135
JBrowse link
G TENT5B terminal nucleotidyltransferase 5B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:84,303,495...84,310,957
Ensembl chr 6:84,304,395...84,310,733
JBrowse link
G TENT5C terminal nucleotidyltransferase 5C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:103,131,819...103,154,074
Ensembl chr 4:103,131,821...103,161,899
JBrowse link
G TENT5D terminal nucleotidyltransferase 5D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:64,120,229...64,122,912
Ensembl chr  X:64,120,248...64,121,420
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,350,073...92,412,330
JBrowse link
G TRAF2 TNF receptor associated factor 2 involved_in IEA Ensembl GO_REF:0000107
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:77,483,997...77,541,557
Ensembl chr 1:77,480,926...77,541,210
JBrowse link
G TRAF5 TNF receptor associated factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:131,772,810...131,822,555
Ensembl chr 9:131,775,447...131,822,530
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,038
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:13,611,786...13,620,250
Ensembl chr 1:13,611,311...13,620,269
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:31358969) UniProt PMID:31358969 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,789...168,736,604
JBrowse link
G YBX2 Y-box binding protein 2 acts_upstream_of_or_within ISO (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chr12:52,635,383...52,642,443
Ensembl chr12:52,635,383...52,641,651
JBrowse link
NAD catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:12790796)
GO_Central
MGI
PMID:12790796 PMID:21873635 NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,044,948...109,059,624
JBrowse link
G NUDT17 nudix hydrolase 17 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:99,472,347...99,477,953
Ensembl chr 4:99,472,350...99,477,932
JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:44,654,364...44,676,942
Ensembl chr12:44,655,811...44,676,945
JBrowse link
NADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:12790796)
GO_Central
MGI
PMID:12790796 PMID:21873635 NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,044,948...109,059,624
JBrowse link
G NUDT13 nudix hydrolase 13 involved_in ISO (MGI:6368098|PMID:28755312) UniProt PMID:28755312 MGI:6368098 NCBI chr14:75,918,056...75,958,187
Ensembl chr14:75,918,171...75,958,183
JBrowse link
G NUDT17 nudix hydrolase 17 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:99,472,347...99,477,953
Ensembl chr 4:99,472,350...99,477,932
JBrowse link
ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,597,636...34,759,216
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase like 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,337
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15572351)
(MGI:2182584|PMID:10601318), (MGI:3029597|PMID:14663139)
Ensembl
MGI
PMID:10601318 PMID:14663139 PMID:15572351 GO_REF:0000107 MGI:2182584 MGI:3029597 NCBI chr 6:70,725,403...70,736,264
Ensembl chr 6:70,724,587...70,736,236
JBrowse link
G LOC100513346 mitochondrial import inner membrane translocase subunit TIM16 ISO RGD PMID:24069394 RGD:13462066 NCBI chr 3:37,928,098...38,005,619
Ensembl chr 3:37,989,180...38,005,617
JBrowse link
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:27184051 RGD:13781945 NCBI chr 6:70,271,296...70,307,403
Ensembl chr 6:70,272,030...70,310,603
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:48,156,835...48,204,701
Ensembl chr14:48,156,727...48,204,926
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RGN regucalcin ISO RGD PMID:2001740 RGD:9590215 NCBI chr  X:41,725,660...41,749,736
Ensembl chr  X:41,726,526...41,749,726
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT2 terminal nucleotidyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,254,320...88,502,342
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRPPRC leucine rich pentatricopeptide repeat containing involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5438202|PMID:22045337)
(MGI:5301479|PMID:21880015)
Ensembl
MGI
PMID:21880015 PMID:22045337 GO_REF:0000107 MGI:5301479 MGI:5438202 NCBI chr 3:96,474,510...96,590,706
Ensembl chr 3:96,474,549...96,595,143
JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:5438202|PMID:22045337)
GO_Central
MGI
Ensembl
PMID:21873635 PMID:22045337 GO_REF:0000107 MGI:5438202 NCBI chr 7:100,710,472...100,718,290
Ensembl chr 7:100,710,381...100,720,374
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 FMRP translational regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G PKP1 plakophilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,689,394...23,735,457
Ensembl chr10:23,689,380...23,735,453
JBrowse link
G PKP3 plakophilin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:214,238...222,762
Ensembl chr 2:214,108...223,837
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX34 DExH-box helicase 34 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,131,193...53,161,369
Ensembl chr 6:53,131,279...53,161,367
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:121,882,734...122,242,325
Ensembl chr 3:121,882,743...122,242,327
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,137,639...36,227,690
JBrowse link
G SECISBP2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5582859|PMID:24274065) Ensembl
MGI
PMID:24274065 GO_REF:0000107 MGI:5582859 NCBI chr14:911,985...955,978
Ensembl chr14:912,015...955,978
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4A terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr16:75,217,212...75,259,805
Ensembl chr16:75,217,213...75,260,149
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,597,636...34,759,216
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in ISO (PMID:18377426) UniProt PMID:18377426 NCBI chr12:27,116,579...27,119,906
Ensembl chr12:27,115,824...27,119,928
JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:112,039,949...112,090,632
Ensembl chr 7:112,038,234...112,090,511
JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTAP methylthioadenosine phosphorylase NOT|involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chr 1:200,882,954...200,934,389
Ensembl chr 1:200,882,955...200,934,639
JBrowse link
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,446,997
JBrowse link
nonfunctional rRNA decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PELO pelota mRNA surveillance and ribosome rescue factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:32,130,254...32,146,114
Ensembl chr16:32,142,034...32,148,335
JBrowse link
nuclear histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SSB small RNA binding exonuclease protection factor La involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:76,088,587...76,099,517
Ensembl chr15:76,088,641...76,100,800
JBrowse link
nuclear mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DXO decapping exoribonuclease involved_in ISO (MGI:5488528|PMID:23523372) UniProt PMID:23523372 MGI:5488528 NCBI chr 7:24,057,670...24,060,108
Ensembl chr 7:24,050,397...24,059,997
JBrowse link
G EXOSC10 exosome component 10 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G EXOSC4 exosome component 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:618,993...621,336
Ensembl chr 4:618,988...621,343
JBrowse link
G EXOSC5 exosome component 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:49,373,378...49,381,875
Ensembl chr 6:49,373,378...49,382,180
JBrowse link
G EXOSC6 exosome component 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:13,295,591...13,296,942
Ensembl chr 6:13,296,055...13,296,873
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,787...28,208,935
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:12,817,081...12,825,847
Ensembl chr11:12,817,110...12,825,847
JBrowse link
G EXOSC9 exosome component 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:102,265,656...102,278,179
Ensembl chr 8:102,264,470...102,303,842
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,063,810...83,174,497
Ensembl chr13:83,065,934...83,174,537
JBrowse link
nuclear polyadenylation-dependent antisense transcript catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
nuclear polyadenylation-dependent CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,787...28,208,935
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:12,817,081...12,825,847
Ensembl chr11:12,817,110...12,825,847
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
nuclear polyadenylation-dependent rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,787...28,208,935
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:12,817,081...12,825,847
Ensembl chr11:12,817,110...12,825,847
JBrowse link
G EXOSC9 exosome component 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:102,265,656...102,278,179
Ensembl chr 8:102,264,470...102,303,842
JBrowse link
nuclear polyadenylation-dependent snoRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
nuclear polyadenylation-dependent snRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
nuclear polyadenylation-dependent tRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,787...28,208,935
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:12,817,081...12,825,847
Ensembl chr11:12,817,110...12,825,847
JBrowse link
nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
nuclear retention of unspliced pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G PRPF18 pre-mRNA processing factor 18 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:48,062,229...48,122,222 JBrowse link
nuclear-transcribed mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,038,104...92,076,477
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G AGO3 argonaute RISC catalytic component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,081,763...92,225,811
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:14,571,712...14,580,740
Ensembl chr12:14,571,310...14,601,576
JBrowse link
G DHX34 DExH-box helicase 34 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,131,193...53,161,369
Ensembl chr 6:53,131,279...53,161,367
JBrowse link
G EXOSC10 exosome component 10 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G EXOSC4 exosome component 4 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 4:618,993...621,336
Ensembl chr 4:618,988...621,343
JBrowse link
G EXOSC9 exosome component 9 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 8:102,265,656...102,278,179
Ensembl chr 8:102,264,470...102,303,842
JBrowse link
G LOC110257828 negative regulator of P-body association involved_in ISO (PMID:27918561) UniProt PMID:27918561 NCBI chr  X:49,156,877...49,230,907 JBrowse link
G LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA InterPro GO_REF:0000002 NCBI chr13:70,339,685...70,349,802
Ensembl chr13:70,336,900...70,348,652
JBrowse link
G LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA UniProt GO_REF:0000104 NCBI chr 2:59,499,560...59,513,258
Ensembl chr 2:59,498,804...59,517,145
JBrowse link
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:76,247,010...76,251,824
Ensembl chr 2:76,241,696...76,252,599
JBrowse link
G MRTO4 MRT4 homolog, ribosome maturation factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:77,747,799...77,753,924
Ensembl chr 6:77,747,567...77,757,721
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:121,882,734...122,242,325
Ensembl chr 3:121,882,743...122,242,327
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:15039777 RGD:10045958 NCBI chr 2:77,551,562...77,563,153
Ensembl chr 2:77,551,563...77,563,107
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:25026078)
(MGI:4819285|PMID:20639877)
UniProt
BHF-UCL
PMID:20639877 PMID:25026078 MGI:4819285 NCBI chr 9:116,204,807...116,292,455
Ensembl chr 9:116,209,094...116,292,366
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,350,073...92,412,330
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,015...59,013,495
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr13:83,063,810...83,174,497
Ensembl chr13:83,065,934...83,174,537
JBrowse link
G XRN2 5'-3' exoribonuclease 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:29,107,641...29,193,500
Ensembl chr17:29,107,668...29,193,494
JBrowse link
nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SKIV2L Ski2 like RNA helicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:24,047,000...24,057,621
Ensembl chr 7:24,047,016...24,057,621
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6L CCR4-NOT transcription complex subunit 6 like involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828348|PMID:17452450) Ensembl
MGI
PMID:17452450 GO_REF:0000107 MGI:3828348 NCBI chr 8:73,191,721...73,335,779
Ensembl chr 8:73,185,999...73,335,741
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:39,395,517...39,402,653
Ensembl chr13:39,395,541...39,402,650
JBrowse link
G POLR2D RNA polymerase II subunit D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:59,479,631...59,495,975
Ensembl chr15:59,479,538...59,498,178
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:116,204,807...116,292,455
Ensembl chr 9:116,209,094...116,292,366
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:263,769,403...263,822,101
Ensembl chr 1:263,772,168...263,822,104
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:23644599)
(MGI:3589099|PMID:15814898)
UniProt
MGI
PMID:15814898 PMID:23644599 MGI:3589099 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3589099|PMID:15814898) Ensembl
MGI
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,011...92,495,574
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3589099|PMID:15814898) Ensembl
MGI
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,406...97,204,700
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in ISO PMID:11279239 UniProt PMID:11279239 RGD:11344953 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,011...92,495,574
JBrowse link
nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,015...59,013,495
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,195
JBrowse link
nuclear-transcribed mRNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in ISO (PMID:23756462) UniProt PMID:23756462 NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,558...132,959,793
JBrowse link
G POLR2G RNA polymerase II subunit G involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:9,004,388...9,008,631
Ensembl chr 2:9,003,781...9,017,779
JBrowse link
nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,558...132,959,793
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
G EXOSC4 exosome component 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:618,993...621,336
Ensembl chr 4:618,988...621,343
JBrowse link
G EXOSC5 exosome component 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:49,373,378...49,381,875
Ensembl chr 6:49,373,378...49,382,180
JBrowse link
G EXOSC6 exosome component 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:13,295,591...13,296,942
Ensembl chr 6:13,296,055...13,296,873
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,787...28,208,935
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:12,817,081...12,825,847
Ensembl chr11:12,817,110...12,825,847
JBrowse link
G TTC37 tetratricopeptide repeat domain 37 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:102,079,675...102,164,020
Ensembl chr 2:102,079,685...102,163,938
JBrowse link
nuclear-transcribed mRNA catabolic process, no-go decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,131,236...78,202,518
Ensembl chr 2:78,124,269...78,202,535
JBrowse link
G CSDE1 cold shock domain containing E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,804,512...105,845,735
Ensembl chr 4:105,804,586...105,845,725
JBrowse link
G GTPBP2 GTP binding protein 2 acts_upstream_of_or_within ISO (MGI:5574482|PMID:25061210) MGI PMID:25061210 MGI:5574482 NCBI chr 7:38,598,763...38,613,217
Ensembl chr 7:38,603,474...38,613,448
JBrowse link
G PELO pelota mRNA surveillance and ribosome rescue factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:32,130,254...32,146,114
Ensembl chr16:32,142,034...32,148,335
JBrowse link
nuclear-transcribed mRNA catabolic process, non-stop decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PELO pelota mRNA surveillance and ribosome rescue factor involved_in IEA InterPro GO_REF:0000002 NCBI chr16:32,130,254...32,146,114
Ensembl chr16:32,142,034...32,148,335
JBrowse link
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASC3 CASC3 exon junction complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr12:22,199,227...22,221,573
Ensembl chr12:22,199,233...22,222,270
JBrowse link
G CTIF cap binding complex dependent translation initiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:98,133,313...98,455,130
Ensembl chr 1:98,133,342...98,456,433
JBrowse link
G DCP1A decapping mRNA 1A involved_in IEA UniProt GO_REF:0000043 NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,392,510...35,479,703
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,648
JBrowse link
G DHX34 DExH-box helicase 34 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:53,131,193...53,161,369
Ensembl chr 6:53,131,279...53,161,367
JBrowse link
G EIF3E eukaryotic translation initiation factor 3 subunit E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:29,288,878...29,343,593
Ensembl chr 4:29,289,327...29,352,902
JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,285,679...2,311,750
Ensembl chr12:2,285,225...2,311,750
JBrowse link
G ETF1 eukaryotic translation termination factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:140,471,931...140,504,381
Ensembl chr 2:140,469,302...140,504,287
JBrowse link
G HELZ2 helicase with zinc finger 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:59,916,378...59,932,537
Ensembl chr 6:59,919,847...59,931,735
JBrowse link
G LOC110258923 protein SMG8-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635
G MAGOH mago homolog, exon junction complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:158,988,172...158,998,987
Ensembl chr 6:158,988,614...159,000,036
JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:61,425,699...61,434,026
Ensembl chr 5:61,425,829...61,433,949
JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
Ensembl
PMID:21873635 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:239,492,573...239,543,925
Ensembl chr 1:239,374,934...239,543,585
JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,177,209...133,192,935
Ensembl chr13:133,157,496...133,192,933
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,505
JBrowse link
G PNLDC1 PARN like ribonuclease domain containing exonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:7,560,084...7,580,062
Ensembl chr 1:7,560,241...7,579,254
JBrowse link
G PNRC2 proline rich nuclear receptor coactivator 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 6:81,722,926...81,726,492
Ensembl chr 6:81,722,026...81,726,492
JBrowse link
G PYM1 PYM homolog 1, exon junction complex associated factor involved_in ISO (PMID:19410547) UniProt PMID:19410547 NCBI chr 5:21,308,877...21,329,329
Ensembl chr 5:21,308,134...21,329,201
JBrowse link
G RBM8A RNA binding motif protein 8A involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr 4:99,408,422...99,411,964
Ensembl chr 4:99,408,464...99,413,492
JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,739,058...39,749,600
Ensembl chr 3:39,739,308...39,758,376
JBrowse link
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 3:26,653,819...26,758,268
Ensembl chr 3:26,653,792...26,754,882
JBrowse link
G SMG5 SMG5 nonsense mediated mRNA decay factor involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000043 NCBI chr 4:93,770,329...93,801,808
Ensembl chr 4:93,770,378...93,815,486
JBrowse link
G SMG6 SMG6 nonsense mediated mRNA decay factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:48,172,705...48,386,996
Ensembl chr12:48,172,706...48,386,886
JBrowse link
G SMG7 SMG7 nonsense mediated mRNA decay factor involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000043 NCBI chr 9:124,696,432...124,775,739
Ensembl chr 9:124,697,093...124,775,966
JBrowse link
G SMG8 SMG8 nonsense mediated mRNA decay factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:35,468,948...35,474,654 JBrowse link
G SMG9 SMG9 nonsense mediated mRNA decay factor involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
Ensembl
PMID:21873635 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:50,550,743...50,569,753
Ensembl chr 6:50,524,527...50,569,738
JBrowse link
G TMOD1 tropomodulin 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:239,375,150...239,468,387
Ensembl chr 1:239,374,934...239,543,585
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,015...59,013,495
JBrowse link
G UPF2 UPF2 regulator of nonsense mediated mRNA decay involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:59,893,106...59,993,403
Ensembl chr10:59,898,922...60,090,229
JBrowse link
G UPF3A UPF3A regulator of nonsense mediated mRNA decay involved_in
NOT|involved_in
IEA
ISO
(PMID:16601204) UniProt
UniProt
PMID:16601204 GO_REF:0000043 NCBI chr11:79,117,708...79,137,083
Ensembl chr11:79,118,600...79,136,225
JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:98,184,646...98,206,135
Ensembl chr  X:98,182,269...98,206,097
JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT3 CCR4-NOT transcription complex subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:55,975,628...55,993,140
Ensembl chr 6:55,973,591...55,991,287
JBrowse link
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:78,131,236...78,202,518
Ensembl chr 2:78,124,269...78,202,535
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:73,191,721...73,335,779
Ensembl chr 8:73,185,999...73,335,741
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G MLH1 mutL homolog 1 acts_upstream_of_or_within ISO (MGI:1934053|PMID:11337385) MGI PMID:11337385 MGI:1934053 NCBI chr13:21,791,276...21,877,789
Ensembl chr13:21,791,201...21,877,757
JBrowse link
G PAN2 poly(A) specific ribonuclease subunit PAN2 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 5:21,712,222...21,730,528
Ensembl chr 5:21,712,247...21,748,950
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr11:5,487,019...5,614,458
Ensembl chr11:5,486,889...5,614,454
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3785219|PMID:18337750)
GO_Central
MGI
PMID:18337750 PMID:21873635 MGI:3785219 NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,505
JBrowse link
G PNLDC1 PARN like ribonuclease domain containing exonuclease 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:7,560,084...7,580,062
Ensembl chr 1:7,560,241...7,579,254
JBrowse link
G SAMD4A sterile alpha motif domain containing 4A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:183,915,337...184,140,122
Ensembl chr 1:183,915,339...184,140,122
JBrowse link
G SAMD4B sterile alpha motif domain containing 4B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:48,002,726...48,046,563
Ensembl chr 6:48,002,712...48,046,561
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3589099|PMID:15814898) Ensembl
MGI
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
nucleobase-containing small molecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chr14:7,565,610...7,604,464
Ensembl chr14:7,565,604...7,594,057
JBrowse link
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:110,827,833...110,877,972
Ensembl chr14:110,827,914...110,882,575
JBrowse link
nucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:107,263,546...107,390,923
Ensembl chr14:107,263,449...107,506,052
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3043501|PMID:15130768)
GO_Central
MGI
PMID:15130768 PMID:21873635 MGI:3043501 NCBI chr13:24,623,579...24,659,642
Ensembl chr13:24,624,417...24,659,639
JBrowse link
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:97,270,698...97,316,578
Ensembl chr 7:97,262,305...97,316,571
JBrowse link
G ENTPD6 ectonucleoside triphosphate diphosphohydrolase 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:30,908,747...30,930,774
Ensembl chr17:30,908,252...30,934,189
JBrowse link
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:110,827,833...110,877,972
Ensembl chr14:110,827,914...110,882,575
JBrowse link
G ENTPD8 ectonucleoside triphosphate diphosphohydrolase 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635
nucleoside phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in ISO (PMID:26238318)
(PMID:26878724)
UniProt PMID:26238318 PMID:26878724 NCBI chr11:19,572,963...19,584,565
Ensembl chr11:19,572,644...19,584,538
JBrowse link
nucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in ISO (PMID:24467396)
(MGI:3844778|PMID:19220460)
UniProt PMID:19220460 PMID:24467396 MGI:3844778 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595
JBrowse link
G ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:31,859,180...31,932,617
Ensembl chr 1:31,859,951...31,959,879
JBrowse link
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3043501|PMID:15130768) Ensembl
MGI
PMID:15130768 GO_REF:0000107 MGI:3043501 NCBI chr13:24,623,579...24,659,642
Ensembl chr13:24,624,417...24,659,639
JBrowse link
G ITPA inosine triphosphatase involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr17:32,458,351...32,474,827
Ensembl chr17:32,455,459...32,474,786
JBrowse link
G SMPDL3A sphingomyelin phosphodiesterase acid like 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:39,848,641...39,869,184
Ensembl chr 1:39,848,641...39,868,731
JBrowse link
nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
G UPP2 uridine phosphorylase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:65,088,652...65,131,739
Ensembl chr15:65,088,284...65,131,789
JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,558...132,959,793
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,655,627...159,793,758
JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chr10:28,995,564...29,061,179
Ensembl chr10:28,995,565...29,061,176
JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELAVL4 ELAV like RNA binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:161,784,146...161,928,953
Ensembl chr 6:161,786,352...161,928,910
JBrowse link
G LARP4B La ribonucleoprotein 4B involved_in ISO (PMID:26001795) FlyBase PMID:26001795 NCBI chr10:68,621,596...68,707,894 JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) UniProt PMID:24356969 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G TENT4A terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr16:75,217,212...75,259,805
Ensembl chr16:75,217,213...75,260,149
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,597,636...34,759,216
JBrowse link
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator involved_in ISO (PMID:11350920) BHF-UCL PMID:11350920 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,187,260...54,228,144
JBrowse link
G ENDOG endonuclease G ISO RGD PMID:16407272 RGD:9685355 NCBI chr 1:269,153,955...269,157,789
Ensembl chr 1:269,154,090...269,157,788
JBrowse link
G HSF1 heat shock transcription factor 1 ISO RGD PMID:21192280 RGD:10403035 NCBI chr 4:463,531...486,483
Ensembl chr 4:461,559...486,473
JBrowse link
G