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ONTOLOGY REPORT - ANNOTATIONS


Term:heterocycle catabolic process
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Accession:GO:0046700 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
Synonyms:exact_synonym: heterocycle breakdown;   heterocycle catabolism;   heterocycle degradation


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10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 6:90,550,768...90,599,171
Ensembl chr 6:90,486,427...90,600,203
JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:83,487,447...83,534,146
Ensembl chr10:83,487,450...83,534,140
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:37,019,341...37,207,620
Ensembl chr19:37,021,291...37,208,601
JBrowse link
G Dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:62,468,015...62,507,034
Ensembl chr 3:62,468,013...62,507,004
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:36,763,671...36,766,214
Ensembl chr18:36,763,671...36,766,214
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D acts_upstream_of_or_within ISO MGI
RGD
PMID:20805360 GO_REF:0000096 MGI:4417868 RGD:10042974 NCBI chr 5:99,955,935...99,979,130
Ensembl chr 5:99,955,935...99,978,938
JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:57,021,049...57,031,507
Ensembl chr17:57,021,051...57,031,522
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:104,794,828...104,818,619
Ensembl chr 3:104,794,836...104,818,563
JBrowse link
G Plekhn1 pleckstrin homology domain containing, family N member 1 involved_in ISO
IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:6105829|PMID:27616329)
MGI
GO_Central
UniProt
PMID:21873635 PMID:27616329 GO_REF:0000096 MGI:4834177 MGI:6105829 MGI:6201960 NCBI chr 4:156,221,456...156,228,542
Ensembl chr 4:156,221,456...156,234,857
JBrowse link
G Qk quaking, KH domain containing RNA binding acts_upstream_of_or_within IDA (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr17:10,206,471...10,319,361
Ensembl chr17:10,202,601...10,319,854
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:46,418,102...46,431,099
Ensembl chr13:46,418,434...46,431,095
JBrowse link
G Rc3h1 RING CCCH (C3H) domains 1 involved_in IDA (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chr 1:160,906,411...160,974,976
Ensembl chr 1:160,906,418...160,974,978
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:148,612,382...148,627,084
Ensembl chr 4:148,612,382...148,627,019
JBrowse link
G Trim71 tripartite motif-containing 71 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:114,511,268...114,564,369
Ensembl chr 9:114,507,133...114,564,369
JBrowse link
G Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:70,331,493...70,353,423
Ensembl chr 8:70,331,525...70,353,278
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO
IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560), (MGI:5751631|PMID:26255671)
MGI
GO_Central
UniProt
PMID:19322177 PMID:21873635 PMID:23185455 PMID:26000482 PMID:26134560 PMID:26255671 GO_REF:0000096 MGI:3842851 MGI:4834177 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631 MGI:6201960 NCBI chr 4:125,118,414...125,127,881
Ensembl chr 4:125,118,423...125,127,840
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in IDA (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr10:7,832,323...7,870,397
Ensembl chr10:7,832,470...7,870,396
JBrowse link
G Zfp36 zinc finger protein 36 involved_in IMP
ISO
IDA
(MGI:5795824|PMID:17288565)
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233)
UniProt
MGI
PMID:17288565 PMID:22701344 PMID:27193233 GO_REF:0000096 MGI:4834177 MGI:5784976 MGI:5788345 MGI:5795824 NCBI chr 7:28,376,784...28,379,228
Ensembl chr 7:28,376,784...28,380,253
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in IDA
IMP
ISO
(MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784976|PMID:22701344)
(MGI:5779430|PMID:27102483), (MGI:5784968|PMID:24700863)
UniProt
MGI
PMID:20622884 PMID:22701344 PMID:24700863 PMID:24733888 PMID:27102483 GO_REF:0000096 MGI:4818820 MGI:4834177 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chr12:80,107,760...80,113,013
Ensembl chr12:80,107,754...80,113,013
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in IDA
ISO
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344) UniProt
MGI
PMID:20622884 PMID:22701344 GO_REF:0000096 MGI:4818820 MGI:4834177 MGI:5784976 NCBI chr17:84,183,924...84,187,947
Ensembl chr17:84,183,931...84,187,947
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 1:190,925,108...190,946,963
Ensembl chr 1:190,925,112...190,946,962
JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:55,243,566...55,363,789
Ensembl chr 1:55,248,658...55,363,469
JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:50,279,393...50,293,620
Ensembl chr17:50,279,395...50,293,636
JBrowse link
G Elavl1 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) involved_in ISO
IDA
(MGI:6105829|PMID:27616329) MGI
UniProt
PMID:27616329 GO_REF:0000096 MGI:4834177 MGI:6105829 NCBI chr 8:4,284,781...4,325,140
Ensembl chr 8:4,285,382...4,325,413
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:110,203,737...110,351,939
Ensembl chr 4:110,203,722...110,351,909
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in IDA (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chr13:58,125,879...58,128,556
Ensembl chr13:58,125,879...58,128,556
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:52,073,377...52,104,039
Ensembl chr14:52,073,377...52,104,028
JBrowse link
G Mapkapk2 MAP kinase-activated protein kinase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:131,053,700...131,097,871
Ensembl chr 1:131,053,700...131,097,826
JBrowse link
G Mir466l microRNA 466l acts_upstream_of_or_within IDA (MGI:4457825|PMID:20410487) MGI PMID:20410487 MGI:4457825 NCBI chr 2:10,516,097...10,516,217
Ensembl chr 2:10,516,097...10,516,217
JBrowse link
G Myd88 myeloid differentiation primary response gene 88 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:119,335,934...119,340,018
Ensembl chr 9:119,335,934...119,341,411
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 acts_upstream_of_or_within ISO MGI
RGD
PMID:11696543 GO_REF:0000096 MGI:4417868 RGD:10045987 NCBI chr10:79,854,432...79,864,435
Ensembl chr10:79,854,427...79,864,771
JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within IDA (MGI:4367529|PMID:19508861) MGI PMID:19508861 MGI:4367529 NCBI chr  X:20,617,357...20,650,889
Ensembl chr  X:20,617,503...20,650,901
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:173,021,891...173,034,734
Ensembl chr 2:173,020,498...173,034,734
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:148,612,382...148,627,084
Ensembl chr 4:148,612,382...148,627,019
JBrowse link
G Tirap toll-interleukin 1 receptor (TIR) domain-containing adaptor protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:35,184,391...35,200,291
Ensembl chr 9:35,184,551...35,200,291
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:28,376,784...28,379,228
Ensembl chr 7:28,376,784...28,380,253
JBrowse link
5-methylcytosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tet1 tet methylcytosine dioxygenase 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:62,804,570...62,887,469
Ensembl chr10:62,804,570...62,908,996
JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:133,463,677...133,545,136
Ensembl chr 3:133,463,679...133,545,139
JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 6:83,362,373...83,457,208
Ensembl chr 6:83,362,373...83,459,084
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-Coenzyme A acetyltransferase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:53,580,522...53,610,350
Ensembl chr 9:53,580,522...53,610,382
JBrowse link
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 involved_in
acts_upstream_of_or_within
IDA (MGI:6450264|PMID:18799520)
(MGI:2137102|PMID:11415433)
UniProt
MGI
PMID:11415433 PMID:18799520 MGI:2137102 MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:6,168,696...6,173,009
Ensembl chr  X:6,168,696...6,173,015
Ensembl chr  X:6,168,696...6,173,015
JBrowse link
G Nudt11 nudix (nucleoside diphosphate linked moiety X)-type motif 11 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:6,047,471...6,054,751
Ensembl chr  X:6,047,453...6,055,110
JBrowse link
G Nudt3 nudix (nucleotide diphosphate linked moiety X)-type motif 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:27,579,382...27,623,452
Ensembl chr17:27,579,382...27,623,495
JBrowse link
G Nudt4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:95,547,007...95,564,146
Ensembl chr10:95,547,007...95,564,146
JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within
involved_in
IMP
IDA
ISO
IBA
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:4835158|PMID:8672487)
(MGI:1861066|PMID:10899903), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
(MGI:74163|PMID:7670465)
(MGI:2151677|PMID:11591798), (MGI:3531253|PMID:8663040)
(MGI:6201960|PMID:21873635)
MGI
UniProt
GO_Central
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 PMID:7731963 PMID:8663040 PMID:8672487 PMID:8894685 PMID:9272950 PMID:9478961 PMID:10720488 PMID:10899903 PMID:11591798 PMID:14607964 PMID:15630442 PMID:16841096 PMID:18340377 PMID:21873635 GO_REF:0000008 MGI:1095761 MGI:1861066 MGI:2151677 MGI:2154458 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:4835158 MGI:49990 MGI:59127 MGI:6201960 MGI:72798 MGI:74163 MGI:76875 MGI:83255 NCBI chr 2:163,726,571...163,750,239
Ensembl chr 2:163,726,584...163,750,239
JBrowse link
G Adal adenosine deaminase-like involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:121,140,044...121,159,440
Ensembl chr 2:121,140,428...121,156,680
JBrowse link
G Pnp purine-nucleoside phosphorylase involved_in IMP (MGI:6479496|PMID:11783524) MGI PMID:11783524 MGI:6479496 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Xdh xanthine dehydrogenase involved_in IMP
ISO
IDA
(MGI:6306257|PMID:30936145)
(MGI:6478529|PMID:1619276)
(MGI:2447927|PMID:12502743)
(MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
MGI PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 PMID:30936145 GO_REF:0000008 MGI:2154458 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478529 MGI:6478533 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in IMP (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr 7:110,767,790...110,812,409
Ensembl chr 7:110,768,206...110,812,405
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in IMP (MGI:3760051|PMID:17502665) MGI PMID:17502665 MGI:3760051 NCBI chr19:40,612,366...40,741,602
Ensembl chr19:40,612,366...40,741,602
JBrowse link
G Nt5e 5' nucleotidase, ecto involved_in IMP (MGI:5917829|PMID:28746349)
(MGI:6478084|PMID:20430891)
MGI PMID:20430891 PMID:28746349 MGI:5917829 MGI:6478084 NCBI chr 9:88,327,609...88,372,089
Ensembl chr 9:88,327,197...88,372,092
JBrowse link
G Nudt9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 acts_upstream_of_or_within IDA (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chr 5:104,045,538...104,065,378
Ensembl chr 5:104,046,306...104,065,379
JBrowse link
aflatoxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsta3 glutathione S-transferase, alpha 3 acts_upstream_of_or_within IMP (MGI:4429761|PMID:19850059) MGI PMID:19850059 MGI:4429761 NCBI chr 1:21,240,565...21,265,575
Ensembl chr 1:21,240,589...21,265,661
JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 acts_upstream_of_or_within ISO MGI
RGD
PMID:27071940 GO_REF:0000096 MGI:4417868 RGD:12910550 NCBI chr 2:75,675,513...75,704,663
Ensembl chr 2:75,675,513...75,704,641
JBrowse link
allantoin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Allc allantoicase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr12:28,553,755...28,582,528
Ensembl chr12:28,553,755...28,582,523
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in IDA (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr 2:163,726,571...163,750,239
Ensembl chr 2:163,726,584...163,750,239
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in IMP (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr 7:110,767,790...110,812,409
Ensembl chr 7:110,768,206...110,812,405
JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO (MGI:6478073|PMID:11133996) MGI PMID:11133996 MGI:6478073 NCBI chr 4:123,201,230...123,225,339
Ensembl chr 4:123,201,504...123,216,275
JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB involved_in IDA (MGI:2153435|PMID:11690631) MGI PMID:11690631 MGI:2153435 NCBI chr12:10,369,971...10,390,174
Ensembl chr12:10,369,973...10,390,175
JBrowse link
G Nt5e 5' nucleotidase, ecto involved_in
acts_upstream_of_or_within
IMP
ISO
IBA
(MGI:6478084|PMID:20430891)
(MGI:6201960|PMID:21873635)
(MGI:3770326|PMID:16547283)
(MGI:5917829|PMID:28746349)
MGI
RGD
GO_Central
PMID:16547283 PMID:20430891 PMID:21414400 PMID:21873635 PMID:28746349 GO_REF:0000096 MGI:3770326 MGI:4417868 MGI:5917829 MGI:6201960 MGI:6478084 RGD:5134346 NCBI chr 9:88,327,609...88,372,089
Ensembl chr 9:88,327,197...88,372,092
JBrowse link
G Pnp purine-nucleoside phosphorylase involved_in IDA
IMP
(MGI:6478860|PMID:8064675)
(MGI:6479496|PMID:11783524)
MGI PMID:8064675 PMID:11783524 MGI:6478860 MGI:6479496 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA
ISO
(MGI:6478860|PMID:8064675)
(MGI:6478529|PMID:1619276)
MGI PMID:1619276 PMID:8064675 MGI:6478529 MGI:6478860 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor, alpha subunit involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:149,104,142...149,120,653
Ensembl chr 4:149,104,146...149,120,647
JBrowse link
G Dffb DNA fragmentation factor, beta subunit involved_in
acts_upstream_of_or_within
IBA
ISO
(MGI:6201960|PMID:21873635)
(MGI:3574013|PMID:15572351)
GO_Central
RGD
MGI
PMID:11425895 PMID:15572351 PMID:21873635 GO_REF:0000096 MGI:3574013 MGI:4417868 MGI:4834177 MGI:6201960 RGD:628524 NCBI chr 4:153,964,447...153,975,121
Ensembl chr 4:153,964,449...153,975,126
JBrowse link
G Dicer1 dicer 1, ribonuclease type III involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr12:104,687,740...104,751,968
Ensembl chr12:104,687,742...104,751,952
JBrowse link
G Dnase1l3 deoxyribonuclease 1-like 3 involved_in
acts_upstream_of_or_within
ISO
IDA
IBA
(MGI:2385551|PMID:12050166)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:12050166 PMID:21873635 GO_REF:0000096 MGI:2385551 MGI:4834177 MGI:6201960 NCBI chr14:7,965,187...7,994,760
Ensembl chr14:7,964,533...7,994,573
JBrowse link
G Dnase2a deoxyribonuclease II alpha involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:84,908,755...84,911,703
Ensembl chr 8:84,908,560...84,922,915
JBrowse link
G Dnase2b deoxyribonuclease II beta involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:146,569,733...146,617,060
Ensembl chr 3:146,580,985...146,615,596
JBrowse link
G Endog endonuclease G involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:3029597|PMID:14663139)
GO_Central
MGI
PMID:14663139 PMID:21873635 MGI:3029597 MGI:6201960 NCBI chr 2:30,171,408...30,174,069
Ensembl chr 2:30,171,493...30,174,069
JBrowse link
G Exog endo/exonuclease (5'-3'), endonuclease G-like involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:119,444,925...119,465,518
Ensembl chr 9:119,444,943...119,465,517
JBrowse link
G Foxl2 forkhead box L2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:98,955,607...98,958,126
Ensembl chr 9:98,955,288...98,958,543
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 involved_in IDA (MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde4d phosphodiesterase 4D, cAMP specific involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:108,654,177...109,955,969
Ensembl chr13:108,449,948...109,953,461
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde1a phosphodiesterase 1A, calmodulin-dependent acts_upstream_of_or_within ISO MGI
RGD
PMID:16514069 GO_REF:0000096 MGI:4417868 RGD:2312521 NCBI chr 2:79,834,453...80,196,522
Ensembl chr 2:79,834,453...80,129,458
JBrowse link
G Pde2a phosphodiesterase 2A, cGMP-stimulated involved_in IBA
ISO
IMP
(MGI:6201960|PMID:21873635)
(MGI:4420377|PMID:19632989)
GO_Central
MGI
UniProt
PMID:19632989 PMID:21873635 GO_REF:0000096 MGI:4420377 MGI:4834177 MGI:6201960 NCBI chr 7:101,421,691...101,512,829
Ensembl chr 7:101,410,886...101,512,819
Ensembl chr 7:101,410,886...101,512,819
JBrowse link
G Pde5a phosphodiesterase 5A, cGMP-specific acts_upstream_of_or_within IDA (MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:2450821 NCBI chr 3:122,729,158...122,859,374
Ensembl chr 3:122,728,947...122,859,374
JBrowse link
G Pde9a phosphodiesterase 9A involved_in ISO
IMP
IBA
IDA
(MGI:5634842|PMID:25799991)
(MGI:6201960|PMID:21873635)
(MGI:1266874|PMID:9624145)
MGI
UniProt
GO_Central
PMID:9624145 PMID:21873635 PMID:25799991 GO_REF:0000096 MGI:1266874 MGI:4834177 MGI:5634842 MGI:6201960 NCBI chr17:31,386,105...31,476,309
Ensembl chr17:31,386,210...31,476,310
JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cda cytidine deaminase involved_in ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 4:138,338,528...138,368,311
Ensembl chr 4:138,338,424...138,367,992
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IDA (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr11:9,118,008...9,136,170
Ensembl chr11:9,118,103...9,136,170
JBrowse link
G Upp2 uridine phosphorylase 2 involved_in IDA (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr 2:58,566,317...58,795,846
Ensembl chr 2:58,567,298...58,792,971
JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin (intrinsic factor-cobalamin receptor) acts_upstream_of_or_within ISO MGI
RGD
PMID:14576052 GO_REF:0000096 MGI:4417868 RGD:8554807 NCBI chr 2:13,276,338...13,491,876
Ensembl chr 2:13,276,338...13,491,813
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 involved_in
acts_upstream_of_or_within
IDA
IBA
(MGI:6450264|PMID:18799520)
(MGI:6201960|PMID:21873635)
(MGI:2137102|PMID:11415433)
UniProt
GO_Central
MGI
PMID:11415433 PMID:18799520 PMID:21873635 MGI:2137102 MGI:6201960 MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
coumarin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2a5 cytochrome P450, family 2, subfamily a, polypeptide 5 involved_in ISO (PMID:19029318) BHF-UCL PMID:19029318 NCBI chr 7:26,835,339...26,843,264
Ensembl chr 7:26,835,305...26,843,548
JBrowse link
G Pon3 paraoxonase 3 acts_upstream_of_or_within ISO MGI
RGD
PMID:12946270 GO_REF:0000096 MGI:4417868 RGD:1303961 NCBI chr 6:5,216,256...5,256,285
Ensembl chr 6:5,220,852...5,256,286
JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C acts_upstream_of_or_within ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:88,095,001...88,220,002
Ensembl chr 1:88,095,062...88,220,002
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:153,455,756...153,487,688
Ensembl chr 1:153,455,758...153,487,660
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 1:178,321,108...178,338,891
Ensembl chr 1:178,321,108...178,337,797
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:95,957,163...96,005,944
Ensembl chr11:95,957,163...96,005,940
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 9:88,449,364...88,482,591
Ensembl chr 9:88,447,009...88,482,574
JBrowse link
G Ybx1 Y box protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:119,277,327...119,296,265
Ensembl chr 4:119,277,981...119,294,604
JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:43,689,689...43,733,853
Ensembl chr19:43,689,672...43,733,697
JBrowse link
CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:99,076,634...99,099,780
Ensembl chr14:99,075,206...99,099,770
JBrowse link
G Exosc10 exosome component 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
G Exosc2 exosome component 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:31,670,715...31,681,352
Ensembl chr 2:31,670,715...31,681,349
JBrowse link
G Exosc3 exosome component 3 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732
JBrowse link
cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:100,574,909...100,591,875
Ensembl chr11:100,574,904...100,591,729
JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase involved_in IMP (MGI:2656023|PMID:12692563) UniProt PMID:12692563 MGI:2656023 NCBI chr 6:122,553,809...122,564,180
Ensembl chr 6:122,553,801...122,564,180
JBrowse link
G Cda cytidine deaminase involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
RGD
GO_Central
PMID:675715 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 RGD:2316616 NCBI chr 4:138,338,528...138,368,311
Ensembl chr 4:138,338,424...138,367,992
JBrowse link
G Cdadc1 cytidine and dCMP deaminase domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:59,559,386...59,597,985
Ensembl chr14:59,559,388...59,597,959
JBrowse link
G Pycrl pyrroline-5-carboxylate reductase-like acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr15:75,916,463...75,921,560
Ensembl chr15:75,916,477...75,921,560
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:70,577,824...70,582,688
Ensembl chr14:70,577,637...70,582,688
JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in IMP (MGI:3640719|PMID:10720488) MGI PMID:10720488 MGI:3640719 NCBI chr 2:163,726,571...163,750,239
Ensembl chr 2:163,726,584...163,750,239
JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO (MGI:6478073|PMID:11133996) MGI PMID:11133996 MGI:6478073 NCBI chr 4:123,201,230...123,225,339
Ensembl chr 4:123,201,504...123,216,275
JBrowse link
G Pnp purine-nucleoside phosphorylase involved_in IMP
ISO
(MGI:6479496|PMID:11783524)
(MGI:6478531|PMID:6771276)
MGI PMID:6771276 PMID:11783524 MGI:6478531 MGI:6479496 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Pnp2 purine-nucleoside phosphorylase 2 involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr14:50,956,141...50,964,751
Ensembl chr14:50,955,992...50,964,749
JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within IDA
IMP
(MGI:76875|PMID:7592575)
(MGI:72798|PMID:7731963)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964)
(MGI:74163|PMID:7670465)
MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 MGI:2155238 MGI:3619310 MGI:72798 MGI:74163 MGI:76875 NCBI chr 2:163,726,571...163,750,239
Ensembl chr 2:163,726,584...163,750,239
JBrowse link
G Samhd1 SAM domain and HD domain, 1 involved_in ISO
IDA
(MGI:5828027|PMID:27920203) MGI PMID:27920203 GO_REF:0000096 MGI:4834177 MGI:5828027 NCBI chr 2:157,097,534...157,135,096
Ensembl chr 2:157,097,533...157,135,265
JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cda cytidine deaminase involved_in ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 4:138,338,528...138,368,311
Ensembl chr 4:138,338,424...138,367,992
JBrowse link
G Nt5c 5',3'-nucleotidase, cytosolic involved_in IDA (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chr11:115,490,420...115,492,070
Ensembl chr11:115,490,420...115,491,862
JBrowse link
G Nt5c3 5'-nucleotidase, cytosolic III involved_in ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 6:56,882,400...56,924,008
Ensembl chr 6:56,882,400...56,923,932
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IDA (MGI:73237|PMID:7744869) MGI PMID:7744869 MGI:73237 NCBI chr11:9,118,008...9,136,170
Ensembl chr11:9,118,103...9,136,170
JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (MGI:3687889|PMID:12849978) MGI PMID:12849978 MGI:3687889 NCBI chr 2:58,566,317...58,795,846
Ensembl chr 2:58,567,298...58,792,971
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 7:127,256,959...127,260,667
Ensembl chr 7:127,256,959...127,260,709
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex, subunit 7 acts_upstream_of_or_within IMP
IGI
(MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 8:40,492,538...40,515,847
Ensembl chr 8:40,492,540...40,515,847
JBrowse link
G Dcp1a decapping mRNA 1A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:30,479,486...30,527,056
Ensembl chr14:30,479,535...30,527,063
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:119,175,253...119,221,614
Ensembl chr 6:119,175,253...119,221,616
JBrowse link
G Dcp2 decapping mRNA 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:44,380,500...44,424,969
Ensembl chr18:44,380,502...44,424,969
JBrowse link
G Dcps decapping enzyme, scavenger involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:35,124,414...35,175,987
Ensembl chr 9:35,124,408...35,176,061
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:25,785,318...25,803,975
Ensembl chr 8:25,785,288...25,803,975
JBrowse link
G Noct nocturnin acts_upstream_of_or_within IGI (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 3:51,224,447...51,251,654
Ensembl chr 3:51,224,447...51,251,644
JBrowse link
G Pan3 PAN3 poly(A) specific ribonuclease subunit acts_upstream_of_or_within IMP (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 5:147,426,208...147,548,501
Ensembl chr 5:147,430,161...147,548,502
JBrowse link
G Patl1 protein associated with topoisomerase II homolog 1 (yeast) involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr19:11,912,399...11,945,096
Ensembl chr19:11,912,399...11,945,091
JBrowse link
G Patl2 protein associated with topoisomerase II homolog 2 (yeast) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:122,120,108...122,186,189
Ensembl chr 2:122,120,108...122,186,189
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp1a decapping mRNA 1A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:30,479,486...30,527,056
Ensembl chr14:30,479,535...30,527,063
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:119,175,253...119,221,614
Ensembl chr 6:119,175,253...119,221,616
JBrowse link
G Edc3 enhancer of mRNA decapping 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:57,708,540...57,750,163
Ensembl chr 9:57,708,540...57,752,499
JBrowse link
G Edc4 enhancer of mRNA decapping 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:105,880,873...105,893,225
Ensembl chr 8:105,880,881...105,894,908
JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within IMP
IDA
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488)
(MGI:74163|PMID:7670465)
(MGI:76875|PMID:7592575)
MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 PMID:10720488 PMID:14607964 MGI:1095761 MGI:2155238 MGI:3619310 MGI:3640719 MGI:72798 MGI:74163 MGI:76875 NCBI chr 2:163,726,571...163,750,239
Ensembl chr 2:163,726,584...163,750,239
JBrowse link
G Pnp purine-nucleoside phosphorylase involved_in ISO
IMP
(MGI:6478531|PMID:6771276)
(MGI:6479496|PMID:11783524)
MGI PMID:6771276 PMID:11783524 MGI:6478531 MGI:6479496 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Pnp2 purine-nucleoside phosphorylase 2 involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr14:50,956,141...50,964,751
Ensembl chr14:50,955,992...50,964,749
JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IDA (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr19:21,391,307...21,472,661
Ensembl chr19:21,391,307...21,473,445
JBrowse link
G Pnp purine-nucleoside phosphorylase acts_upstream_of_or_within IMP (MGI:1859999|PMID:10859343) MGI PMID:10859343 MGI:1859999 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA (MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898) MGI PMID:8226898 PMID:29895374 PMID:30936145 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnp purine-nucleoside phosphorylase acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:1859999|PMID:10859343)
(MGI:6478531|PMID:6771276)
(MGI:6479496|PMID:11783524)
MGI PMID:6771276 PMID:10859343 PMID:11783524 MGI:1859999 MGI:6478531 MGI:6479496 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Pnp2 purine-nucleoside phosphorylase 2 involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr14:50,956,141...50,964,751
Ensembl chr14:50,955,992...50,964,749
JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IMP
IDA
(MGI:6478529|PMID:1619276)
(MGI:6306257|PMID:30936145)
(MGI:2447927|PMID:12502743)
(MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
MGI PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 PMID:30936145 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478529 MGI:6478533 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase (putative) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:137,754,577...137,837,872
Ensembl chr 6:137,754,546...137,857,340
JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:4834177 MGI:6201960 NCBI chr17:46,496,789...46,499,618
Ensembl chr17:46,496,711...46,499,624
JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase (putative) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:137,754,577...137,837,872
Ensembl chr 6:137,754,546...137,857,340
JBrowse link
G Nt5c 5',3'-nucleotidase, cytosolic acts_upstream_of_or_within IDA (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr11:115,490,420...115,492,070
Ensembl chr11:115,490,420...115,491,862
JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:59,847,947...59,876,533
Ensembl chr11:59,839,447...59,880,968
JBrowse link
G Samhd1 SAM domain and HD domain, 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:157,097,534...157,135,096
Ensembl chr 2:157,097,533...157,135,265
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:70,577,824...70,582,688
Ensembl chr14:70,577,637...70,582,688
JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO (MGI:6695668|PMID:17234634) MGI PMID:17234634 MGI:6695668 NCBI chr17:46,496,789...46,499,618
Ensembl chr17:46,496,711...46,499,624
JBrowse link
G Gda guanine deaminase involved_in IDA (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr19:21,391,307...21,472,661
Ensembl chr19:21,391,307...21,473,445
JBrowse link
G Nt5c 5',3'-nucleotidase, cytosolic involved_in IDA (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr11:115,490,420...115,492,070
Ensembl chr11:115,490,420...115,491,862
JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO (MGI:6478073|PMID:11133996) MGI PMID:11133996 MGI:6478073 NCBI chr 4:123,201,230...123,225,339
Ensembl chr 4:123,201,504...123,216,275
JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in IDA (MGI:6478530|PMID:5560407) MGI PMID:5560407 MGI:6478530 NCBI chr19:46,885,390...47,015,174
Ensembl chr19:46,883,317...47,015,153
JBrowse link
G Pnp purine-nucleoside phosphorylase involved_in ISO
IMP
(MGI:6479496|PMID:11783524) MGI PMID:11783524 GO_REF:0000008 MGI:2154458 MGI:6479496 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA (MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898) MGI PMID:8226898 PMID:29895374 PMID:30936145 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr14:73,518,880...73,548,242
Ensembl chr14:73,518,877...73,548,242
JBrowse link
G Samhd1 SAM domain and HD domain, 1 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 2:157,097,534...157,135,096
Ensembl chr 2:157,097,533...157,135,265
JBrowse link
diadenosine hexaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:6,168,696...6,173,009
Ensembl chr  X:6,168,696...6,173,015
Ensembl chr  X:6,168,696...6,173,015
JBrowse link
G Nudt11 nudix (nucleoside diphosphate linked moiety X)-type motif 11 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:6,047,471...6,054,751
Ensembl chr  X:6,047,453...6,055,110
JBrowse link
G Nudt3 nudix (nucleotide diphosphate linked moiety X)-type motif 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:27,579,382...27,623,452
Ensembl chr17:27,579,382...27,623,495
JBrowse link
G Nudt4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:95,547,007...95,564,146
Ensembl chr10:95,547,007...95,564,146
JBrowse link
diadenosine pentaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:6,168,696...6,173,009
Ensembl chr  X:6,168,696...6,173,015
Ensembl chr  X:6,168,696...6,173,015
JBrowse link
G Nudt11 nudix (nucleoside diphosphate linked moiety X)-type motif 11 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:6,047,471...6,054,751
Ensembl chr  X:6,047,453...6,055,110
JBrowse link
G Nudt3 nudix (nucleotide diphosphate linked moiety X)-type motif 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:27,579,382...27,623,452
Ensembl chr17:27,579,382...27,623,495
JBrowse link
G Nudt4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:95,547,007...95,564,146
Ensembl chr10:95,547,007...95,564,146
JBrowse link
diadenosine triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fhit fragile histidine triad gene acts_upstream_of_or_within
involved_in
ISO
IBA
ISS
(MGI:6201960|PMID:21873635)
(MGI:1349483|PMID:9671749)
MGI
RGD
GO_Central
UniProt
PMID:9671749 PMID:16359767 PMID:21873635 GO_REF:0000096 MGI:1349483 MGI:4417868 MGI:4834177 MGI:6201960 RGD:2289929 NCBI chr14:9,550,092...11,162,061
Ensembl chr14:9,550,092...11,162,035
JBrowse link
dibenzo-p-dioxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 acts_upstream_of_or_within ISO 2,3,7,8-tetrachlorodibenzo-p-dioxin MGI
RGD
PMID:12914780 PMID:15812643 GO_REF:0000096 MGI:4417868 RGD:2306662 RGD:2306673 NCBI chr 9:57,687,928...57,703,824
Ensembl chr 9:57,687,928...57,703,824
JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix (nucleoside diphosphate linked moiety X)-type motif 16 acts_upstream_of_or_within IGI (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chr 9:105,129,332...105,133,133
Ensembl chr 9:105,128,903...105,131,824
JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffb DNA fragmentation factor, beta subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:153,964,447...153,975,121
Ensembl chr 4:153,964,449...153,975,126
JBrowse link
G Dnase1 deoxyribonuclease I involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:4,036,958...4,040,024
Ensembl chr16:4,036,942...4,040,024
JBrowse link
G Dnase1l1 deoxyribonuclease 1-like 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:74,273,217...74,282,333
Ensembl chr  X:74,273,217...74,282,337
JBrowse link
G Dnase1l2 deoxyribonuclease 1-like 2 involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:5308183|PMID:21307874)
GO_Central
MGI
PMID:21307874 PMID:21873635 MGI:5308183 MGI:6201960 NCBI chr17:24,440,087...24,443,763
Ensembl chr17:24,440,081...24,443,105
JBrowse link
G Dnase1l3 deoxyribonuclease 1-like 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:7,965,187...7,994,760
Ensembl chr14:7,964,533...7,994,573
JBrowse link
G Dnase2a deoxyribonuclease II alpha acts_upstream_of_or_within IMP (MGI:3521632|PMID:15568025) MGI PMID:15568025 MGI:3521632 NCBI chr 8:84,908,755...84,911,703
Ensembl chr 8:84,908,560...84,922,915
JBrowse link
G Endog endonuclease G involved_in TAS (MGI:5306292|PMID:18309324) UniProt PMID:18309324 MGI:5306292 NCBI chr 2:30,171,408...30,174,069
Ensembl chr 2:30,171,493...30,174,069
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IMP
IDA
(MGI:3834787|PMID:18724932), (MGI:4414715|PMID:19923437), (MGI:5562498|PMID:23993650)
(MGI:4848004|PMID:20871604)
(MGI:5637600|PMID:25848017)
MGI PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 MGI:3834787 MGI:4414715 MGI:4848004 MGI:5562498 MGI:5637600 NCBI chr 9:109,057,932...109,059,723
Ensembl chr 9:109,057,933...109,059,734
JBrowse link
DNA catabolic process, endonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnase1 deoxyribonuclease I involved_in IDA
IBA
(MGI:6094744|PMID:29191910)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:29191910 MGI:6094744 MGI:6201960 NCBI chr16:4,036,958...4,040,024
Ensembl chr16:4,036,942...4,040,024
JBrowse link
G Dnase1l1 deoxyribonuclease 1-like 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:74,273,217...74,282,333
Ensembl chr  X:74,273,217...74,282,337
JBrowse link
G Dnase1l2 deoxyribonuclease 1-like 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:24,440,087...24,443,763
Ensembl chr17:24,440,081...24,443,105
JBrowse link
G Dnase1l3 deoxyribonuclease 1-like 3 involved_in IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:6094744|PMID:29191910)
GO_Central
UniProt
PMID:21873635 PMID:29191910 MGI:6094744 MGI:6201960 NCBI chr14:7,965,187...7,994,760
Ensembl chr14:7,964,533...7,994,573
JBrowse link
G Dnase2a deoxyribonuclease II alpha acts_upstream_of_or_within IMP (MGI:3818215|PMID:18991290) MGI PMID:18991290 MGI:3818215 NCBI chr 8:84,908,755...84,911,703
Ensembl chr 8:84,908,560...84,922,915
JBrowse link
G Fbh1 F-box DNA helicase 1 acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 2:11,742,573...11,777,585
Ensembl chr 2:11,742,573...11,777,582
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr19:5,482,561...5,488,389
Ensembl chr19:5,482,345...5,488,402
JBrowse link
G Rexo4 REX4, 3'-5' exonuclease involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 2:26,953,559...26,964,386
Ensembl chr 2:26,953,563...26,964,386
JBrowse link
G Setmar SET domain without mariner transposase fusion involved_in ISO (PMID:20521842), (PMID:21491884)
(PMID:24573677)
UniProt PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr 6:108,065,045...108,077,127
Ensembl chr 6:108,065,045...108,077,122
JBrowse link
DNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isg20 interferon-stimulated protein involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 7:78,913,396...78,920,396
Ensembl chr 7:78,913,424...78,920,396
JBrowse link
G Rexo4 REX4, 3'-5' exonuclease involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 2:26,953,559...26,964,386
Ensembl chr 2:26,953,563...26,964,386
JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:109,057,932...109,059,723
Ensembl chr 9:109,057,933...109,059,734
JBrowse link
G Trex2 three prime repair exonuclease 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:73,433,705...73,435,343
Ensembl chr  X:73,433,705...73,435,344
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:147,012,755...147,078,000
Ensembl chr 2:147,012,996...147,078,000
JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dna2 DNA replication helicase/nuclease 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:62,946,983...62,974,188
Ensembl chr10:62,947,026...62,974,185
JBrowse link
G Fen1 flap structure specific endonuclease 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:10,199,132...10,204,393
Ensembl chr19:10,199,132...10,204,169
JBrowse link
G Rnaseh1 ribonuclease H1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr12:28,649,601...28,659,592
Ensembl chr12:28,649,602...28,659,589
JBrowse link
G Rnaseh2a ribonuclease H2, large subunit involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:84,956,610...84,969,598
Ensembl chr 8:84,956,610...84,969,767
JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5',3'-nucleotidase, cytosolic involved_in IDA (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chr11:115,490,420...115,492,070
Ensembl chr11:115,490,420...115,491,862
JBrowse link
G Tymp thymidine phosphorylase involved_in IMP (MGI:2183137|PMID:12077348) MGI PMID:12077348 MGI:2183137 NCBI chr15:89,371,631...89,377,036
Ensembl chr15:89,371,931...89,377,039
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IMP (MGI:2183137|PMID:12077348) MGI PMID:12077348 MGI:2183137 NCBI chr11:9,118,008...9,136,170
Ensembl chr11:9,118,103...9,136,170
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chr 7:127,256,959...127,260,667
Ensembl chr 7:127,256,959...127,260,709
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5',3'-nucleotidase, cytosolic involved_in IDA (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr11:115,490,420...115,492,070
Ensembl chr11:115,490,420...115,491,862
JBrowse link
G Nt5c3 5'-nucleotidase, cytosolic III involved_in ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 6:56,882,400...56,924,008
Ensembl chr 6:56,882,400...56,923,932
JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial acts_upstream_of_or_within IDA (MGI:2388903|PMID:12234672) MGI PMID:12234672 MGI:2388903 NCBI chr11:59,847,947...59,876,533
Ensembl chr11:59,839,447...59,880,968
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in
acts_upstream_of_or_within
IDA
IC
(MGI:6478539|PMID:14154460) MGI
GOC
PMID:14154460 MGI:6478539 NCBI chr11:9,118,008...9,136,170
Ensembl chr11:9,118,103...9,136,170
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dut deoxyuridine triphosphatase acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:6201960|PMID:21873635) MGI
RGD
GO_Central
PMID:1315924 PMID:3032103 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:2300191 RGD:2301218 NCBI chr 2:125,247,248...125,259,049
Ensembl chr 2:125,247,190...125,258,608
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:49,671,497...49,713,401
Ensembl chr11:49,671,503...49,712,723
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 8:40,492,538...40,515,847
Ensembl chr 8:40,492,540...40,515,847
JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:58,092,794...58,118,597
Ensembl chr11:58,104,153...58,118,594
JBrowse link
G Exosc2 exosome component 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:31,670,715...31,681,352
Ensembl chr 2:31,670,715...31,681,349
JBrowse link
G Exosc3 exosome component 3 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732
JBrowse link
G Exosc5 exosome component 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:25,659,153...25,668,032
Ensembl chr 7:25,659,164...25,671,368
JBrowse link
G Exosc7 exosome component 7 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:123,113,231...123,136,129
Ensembl chr 9:123,113,215...123,136,129
JBrowse link
G Exosc8 exosome component 8 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:54,728,679...54,735,364
Ensembl chr 3:54,728,678...54,735,393
JBrowse link
G Exosc9 exosome component 9 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 3:36,552,606...36,565,727
Ensembl chr 3:36,552,606...36,565,727
JBrowse link
fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fitm2 fat storage-inducing transmembrane protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:163,468,703...163,472,629
Ensembl chr 2:163,466,379...163,472,629
JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcp valosin containing protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:42,979,964...43,000,507
Ensembl chr 4:42,979,963...43,000,507
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs 5, 10-methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chr 9:89,211,190...89,240,225
Ensembl chr 9:89,210,676...89,377,713
JBrowse link
G Pm20d2 peptidase M20 domain containing 2 NOT|involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:33,170,401...33,189,737
Ensembl chr 4:33,174,230...33,189,737
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chr14:69,337,151...69,366,742
Ensembl chr14:69,337,174...69,367,270
JBrowse link
G Nudt18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:70,577,824...70,582,688
Ensembl chr14:70,577,637...70,582,688
JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IDA (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr19:21,391,307...21,472,661
Ensembl chr19:21,391,307...21,473,445
JBrowse link
G Gm13377 predicted gene 13377 NOT|involved_in ISO (PMID:21054786) UniProt PMID:21054786 NCBI chr 2:21,044,809...21,139,682
Ensembl chr 2:21,044,808...21,141,954
JBrowse link
G Gmpr2 guanosine monophosphate reductase 2 acts_upstream_of_or_within ISO (MGI:2661317|PMID:12669231) MGI PMID:12669231 MGI:2661317 NCBI chr14:55,672,235...55,687,861
Ensembl chr14:55,671,941...55,679,200
JBrowse link
G Hprt hypoxanthine guanine phosphoribosyl transferase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:52,988,078...53,021,660
Ensembl chr  X:52,988,137...53,021,659
JBrowse link
G Pnp purine-nucleoside phosphorylase involved_in IMP
ISO
(MGI:6479496|PMID:11783524) MGI PMID:11783524 GO_REF:0000008 MGI:2154458 MGI:6479496 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA (MGI:6306257|PMID:30936145), (MGI:6478533|PMID:8226898) MGI PMID:8226898 PMID:30936145 MGI:6306257 MGI:6478533 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
guanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr19:21,391,307...21,472,661
Ensembl chr19:21,391,307...21,473,445
JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA
ISO
(MGI:49329|PMID:1590774)
(MGI:6479801|PMID:3443108)
MGI PMID:1590774 PMID:3443108 MGI:49329 MGI:6479801 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
guanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnp purine-nucleoside phosphorylase acts_upstream_of_or_within IMP (MGI:1859999|PMID:10859343) MGI PMID:10859343 MGI:1859999 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
heme catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blvra biliverdin reductase A involved_in
acts_upstream_of_or_within
ISO (MGI:2182161|PMID:12079357) MGI PMID:12079357 GO_REF:0000096 MGI:2182161 MGI:4834177 NCBI chr 2:127,070,629...127,097,084
Ensembl chr 2:127,070,665...127,097,084
JBrowse link
G Blvrb biliverdin reductase B (flavin reductase (NADPH)) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:27,447,978...27,465,981
Ensembl chr 7:27,447,978...27,466,144
JBrowse link
G Hmox1 heme oxygenase 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(MGI:6201960|PMID:21873635) MGI
RGD
GO_Central
PMID:15226268 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:4834177 MGI:6201960 RGD:1547877 NCBI chr 8:75,093,618...75,100,593
Ensembl chr 8:75,093,621...75,100,589
JBrowse link
G Hmox2 heme oxygenase 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:4,726,361...4,766,742
Ensembl chr16:4,726,361...4,766,742
JBrowse link
heme oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 8:75,093,618...75,100,593
Ensembl chr 8:75,093,621...75,100,589
JBrowse link
G Hmox2 heme oxygenase 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:4,726,361...4,766,742
Ensembl chr16:4,726,361...4,766,742
JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnmt histamine N-methyltransferase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:24,002,911...24,049,758
Ensembl chr 2:24,002,910...24,049,394
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ataxia telangiectasia mutated involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:53,437,122...53,536,828
Ensembl chr 9:53,439,149...53,536,740
JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:44,380,500...44,424,969
Ensembl chr18:44,380,502...44,424,969
JBrowse link
G Eri1 exoribonuclease 1 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 8:35,465,265...35,495,533
Ensembl chr 8:35,465,253...35,496,196
JBrowse link
G Exosc10 exosome component 10 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
G Exosc4 exosome component 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:76,327,397...76,330,670
Ensembl chr15:76,327,397...76,330,677
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:25,785,318...25,803,975
Ensembl chr 8:25,785,288...25,803,975
JBrowse link
G Mtpap mitochondrial poly(A) polymerase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:4,375,589...4,399,888
Ensembl chr18:4,375,592...4,397,330
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:93,145,855...93,192,435
Ensembl chr13:93,146,282...93,192,385
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:88,199,213...88,263,314
Ensembl chr 8:88,199,213...88,259,722
JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr19:8,953,832...8,966,210
Ensembl chr19:8,953,847...8,966,210
JBrowse link
G Tut4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 4:108,459,410...108,559,415
Ensembl chr 4:108,459,426...108,559,421
JBrowse link
G Tut7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr13:59,771,876...59,823,169
Ensembl chr13:59,771,561...59,823,147
JBrowse link
G Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:70,331,493...70,353,423
Ensembl chr 8:70,331,525...70,353,278
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:95,954,750...96,057,806
Ensembl chr 9:95,954,760...96,057,803
JBrowse link
hypoxanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xdh xanthine dehydrogenase acts_upstream_of_or_within
involved_in
ISO
IMP
IDA
(MGI:6306257|PMID:30936145)
(MGI:6479801|PMID:3443108)
(MGI:49329|PMID:1590774)
(MGI:6478529|PMID:1619276)
MGI
RGD
PMID:232638 PMID:1590774 PMID:1619276 PMID:3443108 PMID:30936145 GO_REF:0000008 GO_REF:0000096 MGI:2154458 MGI:4417868 MGI:49329 MGI:6306257 MGI:6478529 MGI:6479801 RGD:13210503 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix (nucleoside diphosphate linked moiety X)-type motif 16 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:105,129,332...105,133,133
Ensembl chr 9:105,128,903...105,131,824
JBrowse link
G Nudt9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 acts_upstream_of_or_within IDA (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chr 5:104,045,538...104,065,378
Ensembl chr 5:104,046,306...104,065,379
JBrowse link
IMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5',3'-nucleotidase, cytosolic involved_in IDA (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chr11:115,490,420...115,492,070
Ensembl chr11:115,490,420...115,491,862
JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO (MGI:6478073|PMID:11133996) MGI PMID:11133996 MGI:6478073 NCBI chr 4:123,201,230...123,225,339
Ensembl chr 4:123,201,504...123,216,275
JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:5295913|PMID:21873433) MGI PMID:21873433 MGI:5295913 NCBI chr19:46,885,390...47,015,174
Ensembl chr19:46,883,317...47,015,153
JBrowse link
G Pnp purine-nucleoside phosphorylase involved_in IMP
ISO
(MGI:6479496|PMID:11783524)
(MGI:6478531|PMID:6771276)
MGI PMID:6771276 PMID:11783524 MGI:6478531 MGI:6479496 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Pnp2 purine-nucleoside phosphorylase 2 involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr14:50,956,141...50,964,751
Ensembl chr14:50,955,992...50,964,749
JBrowse link
G Xdh xanthine dehydrogenase involved_in IDA
ISO
(MGI:6478860|PMID:8064675)
(MGI:6478529|PMID:1619276)
MGI PMID:1619276 PMID:8064675 MGI:6478529 MGI:6478860 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnp purine-nucleoside phosphorylase acts_upstream_of_or_within ISO
IMP
(MGI:1859999|PMID:10859343), (MGI:3689284|PMID:16964310) MGI PMID:10859343 PMID:16964310 GO_REF:0000008 MGI:1859999 MGI:2154458 MGI:3689284 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
G Pnp2 purine-nucleoside phosphorylase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:23438750)
(PMID:16964310)
UniProt
MGI
PMID:16964310 PMID:23438750 NCBI chr14:50,956,141...50,964,751
Ensembl chr14:50,955,992...50,964,749
JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IMP
IDA
(MGI:6478529|PMID:1619276)
(MGI:2447927|PMID:12502743)
(MGI:6306257|PMID:30936145)
(MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
MGI PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 PMID:30936145 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478529 MGI:6478533 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpa inosine triphosphatase (nucleoside triphosphate pyrophosphatase) acts_upstream_of_or_within IMP (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chr 2:130,664,692...130,681,614
Ensembl chr 2:130,667,610...130,681,614
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:152,178,100...152,271,855
Ensembl chr 4:152,178,134...152,271,855
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlycd malonyl-CoA decarboxylase involved_in IBA
IDA
ISO
(MGI:6201960|PMID:21873635)
(MGI:5501374|PMID:23746352)
GO_Central
UniProt
MGI
PMID:21873635 PMID:23746352 GO_REF:0000096 MGI:4834177 MGI:5501374 MGI:6201960 NCBI chr 8:119,394,852...119,421,838
Ensembl chr 8:119,394,878...119,411,102
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:152,178,100...152,271,855
Ensembl chr 4:152,178,134...152,271,855
JBrowse link
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 involved_in IDA (MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in IMP
IDA
ISO
IBA
(MGI:5494337|PMID:23594738)
(MGI:5603455|PMID:25119025)
(MGI:6201960|PMID:21873635)
UniProt
MGI
GO_Central
PMID:21873635 PMID:23594738 PMID:25119025 GO_REF:0000096 MGI:4834177 MGI:5494337 MGI:5603455 MGI:6201960 NCBI chr 1:86,701,924...87,050,097
Ensembl chr 1:86,703,808...87,050,095
JBrowse link
G Lin28a lin-28 homolog A (C. elegans) involved_in ISO
IMP
(MGI:4359358|PMID:18604195), (MGI:4359360|PMID:18292307) MGI
UniProt
PMID:18292307 PMID:18604195 GO_REF:0000096 MGI:4359358 MGI:4359360 MGI:4834177 NCBI chr 4:134,003,330...134,019,196
Ensembl chr 4:134,003,330...134,018,841
JBrowse link
G Lin28b lin-28 homolog B (C. elegans) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:45,376,617...45,486,314
Ensembl chr10:45,376,620...45,486,395
JBrowse link
G Parn poly(A)-specific ribonuclease (deadenylation nuclease) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:13,537,964...13,668,198
Ensembl chr16:13,537,960...13,668,170
JBrowse link
G Snd1 staphylococcal nuclease and tudor domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:28,480,337...28,935,162
Ensembl chr 6:28,475,139...28,935,162
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:88,199,213...88,263,314
Ensembl chr 8:88,199,213...88,259,722
JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:108,459,410...108,559,415
Ensembl chr 4:108,459,426...108,559,421
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde12 phosphodiesterase 12 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:26,664,117...26,669,846
Ensembl chr14:26,659,958...26,669,883
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO
IMP
IBA
(MGI:4881376|PMID:20691904)
(MGI:6201960|PMID:21873635)
MGI
UniProt
GO_Central
PMID:20691904 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:4881376 MGI:6201960 NCBI chr11:29,130,129...29,161,827
Ensembl chr11:29,130,744...29,161,828
JBrowse link
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:62,429,221...62,451,515
Ensembl chr10:62,429,209...62,449,738
JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:62,429,221...62,451,515
Ensembl chr10:62,429,209...62,449,738
JBrowse link
mitochondrial ncRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:62,429,221...62,451,515
Ensembl chr10:62,429,209...62,449,738
JBrowse link
mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:29,130,129...29,161,827
Ensembl chr11:29,130,744...29,161,828
JBrowse link
mitochondrial RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:62,429,221...62,451,515
Ensembl chr10:62,429,209...62,449,738
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago3 argonaute RISC catalytic subunit 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:126,326,994...126,431,670
Ensembl chr 4:126,331,704...126,429,556
JBrowse link
G Ago4 argonaute RISC catalytic subunit 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:126,489,487...126,533,586
Ensembl chr 4:126,489,541...126,533,472
JBrowse link
G Cnot10 CCR4-NOT transcription complex, subunit 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:114,585,874...114,640,220
Ensembl chr 9:114,585,878...114,640,184
JBrowse link
G Cnot9 CCR4-NOT transcription complex, subunit 9 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:74,506,036...74,530,842
Ensembl chr 1:74,506,058...74,530,842
JBrowse link
G Dcp2 decapping mRNA 2 involved_in IMP
ISO
(MGI:4849882|PMID:21070968) UniProt
MGI
PMID:21070968 GO_REF:0000096 MGI:4834177 MGI:4849882 NCBI chr18:44,380,500...44,424,969
Ensembl chr18:44,380,502...44,424,969
JBrowse link
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:86,701,924...87,050,097
Ensembl chr 1:86,703,808...87,050,095
JBrowse link
G Dxo decapping exoribonuclease involved_in IMP
ISO
IDA
(MGI:5488528|PMID:23523372)
(MGI:6368104|PMID:28283058)
UniProt
MGI
PMID:23523372 PMID:28283058 GO_REF:0000096 MGI:4834177 MGI:5488528 MGI:6368104 NCBI chr17:34,836,996...34,839,187
Ensembl chr17:34,837,019...34,839,233
JBrowse link
G Hspa1a heat shock protein 1A involved_in ISO (PMID:10205060) UniProt PMID:10205060 NCBI chr17:34,969,359...34,972,156
Ensembl chr17:34,969,190...34,972,156
JBrowse link
G Hspa1b heat shock protein 1B involved_in ISO (PMID:10205060) UniProt PMID:10205060 NCBI chr17:34,956,429...34,959,238
Ensembl chr17:34,956,436...34,959,238
JBrowse link
G Khsrp KH-type splicing regulatory protein acts_upstream_of_or_within IDA (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr17:57,021,049...57,031,507
Ensembl chr17:57,021,051...57,031,522
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr17:34,981,854...34,985,891
Ensembl chr17:34,981,862...34,985,891
JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 6:56,701,063...56,704,699
Ensembl chr 6:56,701,063...56,704,710
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 8:78,804,868...78,821,152
Ensembl chr 8:78,804,865...78,821,140
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr10:80,852,825...80,855,209
Ensembl chr10:80,852,821...80,855,209
JBrowse link
G Mettl14 methyltransferase like 14 involved_in IMP (MGI:5927282|PMID:28965759) UniProt PMID:28965759 MGI:5927282 NCBI chr 3:123,368,295...123,385,990
Ensembl chr 3:123,368,297...123,386,108
JBrowse link
G Mettl16 methyltransferase like 16 involved_in IDA (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr11:74,770,815...74,826,855
Ensembl chr11:74,770,830...74,828,525
JBrowse link
G Mettl3 methyltransferase like 3 involved_in IMP (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:52,294,841...52,308,741
Ensembl chr14:52,294,841...52,305,128
JBrowse link
G Mex3d mex3 RNA binding family member D acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr10:80,380,355...80,387,651
Ensembl chr10:80,380,355...80,387,659
JBrowse link
G Mirlet7b microRNA let7b acts_upstream_of_or_within IGI (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr15:85,707,319...85,707,403
Ensembl chr15:85,707,319...85,707,403
JBrowse link
G Mirlet7c-1 microRNA let7c-1 acts_upstream_of_or_within IGI (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr16:77,599,657...77,599,750
Ensembl chr16:77,599,657...77,599,750
JBrowse link
G Mirlet7c-2 microRNA let7c-2 acts_upstream_of_or_within IGI (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr15:85,706,603...85,706,697
Ensembl chr15:85,706,603...85,706,697
JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in IMP (MGI:4431145|PMID:20133598) UniProt PMID:20133598 MGI:4431145 NCBI chr 7:18,987,524...18,988,962
Ensembl chr 7:18,987,400...18,988,962
JBrowse link
G Nudt12 nudix (nucleoside diphosphate linked moiety X)-type motif 12 involved_in IDA (MGI:6368680|PMID:31101919) UniProt PMID:31101919 MGI:6368680 NCBI chr17:59,000,107...59,013,367
Ensembl chr17:58,999,618...59,013,372
JBrowse link
G Nudt16 nudix (nucleoside diphosphate linked moiety X)-type motif 16 involved_in IMP
ISO
IBA
(MGI:4849882|PMID:21070968)
(MGI:6201960|PMID:21873635)
UniProt
MGI
GO_Central
PMID:21070968 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:4849882 MGI:6201960 NCBI chr 9:105,129,332...105,133,133
Ensembl chr 9:105,128,903...105,131,824
JBrowse link
G Nudt16l1 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 NOT|involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:4,939,111...4,941,028
Ensembl chr16:4,938,761...4,941,032
JBrowse link
G Nudt16l2 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:105,143,344...105,145,082
Ensembl chr 9:105,143,342...105,145,092
JBrowse link
G Parn poly(A)-specific ribonuclease (deadenylation nuclease) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:13,537,964...13,668,198
Ensembl chr16:13,537,960...13,668,170
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:29,130,129...29,161,827
Ensembl chr11:29,130,744...29,161,828
JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:34,484,022...34,495,246
Ensembl chr15:34,484,021...34,495,255
JBrowse link
G Slfn14 schlafen 14 involved_in ISO
IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:5705207|PMID:25996083)
MGI
GO_Central
UniProt
PMID:21873635 PMID:25996083 GO_REF:0000096 MGI:4834177 MGI:5705207 MGI:6201960 NCBI chr11:83,275,110...83,286,726
Ensembl chr11:83,275,110...83,286,726
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein 2 involved_in ISO
IMP
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673) MGI
UniProt
PMID:29855337 PMID:30065315 PMID:30150673 GO_REF:0000096 MGI:4834177 MGI:6316439 MGI:6316688 MGI:6317061 NCBI chr 4:132,184,916...132,212,256
Ensembl chr 4:132,184,912...132,212,303
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:5567042|PMID:24415781)
GO_Central
MGI
PMID:21873635 PMID:24415781 MGI:5567042 MGI:6201960 NCBI chr10:7,832,323...7,870,397
Ensembl chr10:7,832,470...7,870,396
JBrowse link
G Zfp36 zinc finger protein 36 acts_upstream_of_or_within
involved_in
ISO (MGI:1859531|PMID:10751406), (MGI:2176348|PMID:11782475) MGI PMID:10751406 PMID:11782475 GO_REF:0000096 MGI:1859531 MGI:2176348 MGI:4834177 NCBI chr 7:28,376,784...28,379,228
Ensembl chr 7:28,376,784...28,380,253
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO (MGI:1859531|PMID:10751406) MGI PMID:10751406 MGI:1859531 NCBI chr12:80,107,760...80,113,013
Ensembl chr12:80,107,754...80,113,013
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in IDA (MGI:5320815|PMID:22367205) UniProt PMID:22367205 MGI:5320815 NCBI chr17:84,183,924...84,187,947
Ensembl chr17:84,183,931...84,187,947
JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within IDA (MGI:49288|PMID:1370712) MGI PMID:1370712 MGI:49288 NCBI chr15:57,694,667...57,839,832
Ensembl chr15:57,694,665...57,839,832
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within
ISO PMID:30508596 ARUK-UCL
MGI
PMID:30508596 GO_REF:0000096 MGI:4417868 RGD:38501076 NCBI chr 2:90,940,259...91,019,497
Ensembl chr 2:90,940,382...91,019,497
JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like acts_upstream_of_or_within IMP (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 5:96,070,333...96,164,198
Ensembl chr 5:96,070,333...96,164,171
JBrowse link
G Fto fat mass and obesity associated involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:91,313,367...91,668,433
Ensembl chr 8:91,313,525...91,668,439
JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:87,326,931...87,450,810
Ensembl chr 1:87,326,998...87,450,796
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R acts_upstream_of_or_within ISO MGI
RGD
PMID:15798208 GO_REF:0000096 MGI:4417868 RGD:9854643 NCBI chr 4:136,310,942...136,345,981
Ensembl chr 4:136,310,942...136,359,447
JBrowse link
G Mettl14 methyltransferase like 14 involved_in IMP (MGI:5559905|PMID:24394384), (MGI:5927282|PMID:28965759) UniProt PMID:24394384 PMID:28965759 MGI:5559905 MGI:5927282 NCBI chr 3:123,368,295...123,385,990
Ensembl chr 3:123,368,297...123,386,108
JBrowse link
G Mettl16 methyltransferase like 16 involved_in IDA (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr11:74,770,815...74,826,855
Ensembl chr11:74,770,830...74,828,525
JBrowse link
G Mettl3 methyltransferase like 3 involved_in IMP (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 PMID:28965759 MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:52,294,841...52,308,741
Ensembl chr14:52,294,841...52,305,128
JBrowse link
G Mex3d mex3 RNA binding family member D involved_in NAS (MGI:5009173|PMID:14769789) BHF-UCL PMID:14769789 MGI:5009173 NCBI chr10:80,380,355...80,387,651
Ensembl chr10:80,380,355...80,387,659
JBrowse link
G Pum1 pumilio RNA-binding family member 1 involved_in IDA (MGI:5640888|PMID:25768905) UniProt PMID:25768905 MGI:5640888 NCBI chr 4:130,663,238...130,781,564
Ensembl chr 4:130,663,321...130,781,564
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:46,418,102...46,431,099
Ensembl chr13:46,418,434...46,431,095
JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:34,484,022...34,495,246
Ensembl chr15:34,484,021...34,495,255
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IMP (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr18:10,064,401...10,182,251
Ensembl chr18:10,064,401...10,182,045
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IMP (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr12:16,894,978...16,988,274
Ensembl chr12:16,894,895...16,987,823
JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein 1 involved_in ISO
IMP
IBA
(MGI:6490006|PMID:32943573)
(MGI:6201960|PMID:21873635)
MGI
UniProt
GO_Central
PMID:21873635 PMID:32943573 GO_REF:0000096 MGI:4834177 MGI:6201960 MGI:6490006 NCBI chr 2:180,904,377...180,920,936
Ensembl chr 2:180,904,377...180,920,949
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein 2 involved_in ISO
IMP
IBA
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673), (MGI:6490006|PMID:32943573), (MGI:6508516|PMID:31959747)
(MGI:6201960|PMID:21873635)
MGI
UniProt
GO_Central
PMID:21873635 PMID:29855337 PMID:30065315 PMID:30150673 PMID:31959747 PMID:32943573 GO_REF:0000096 MGI:4834177 MGI:6201960 MGI:6316439 MGI:6316688 MGI:6317061 MGI:6490006 MGI:6508516 NCBI chr 4:132,184,916...132,212,256
Ensembl chr 4:132,184,912...132,212,303
JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein 3 involved_in IBA
ISO
IMP
(MGI:6201960|PMID:21873635)
(MGI:6490006|PMID:32943573)
GO_Central
MGI
UniProt
PMID:21873635 PMID:32943573 GO_REF:0000096 MGI:4834177 MGI:6201960 MGI:6490006 NCBI chr 3:16,183,148...16,217,037
Ensembl chr 3:16,183,212...16,217,037
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 acts_upstream_of_or_within IDA (MGI:3057047|PMID:15480992) MGI PMID:15480992 MGI:3057047 NCBI chr 6:122,577,792...122,603,024
Ensembl chr 6:122,577,792...122,602,444
JBrowse link
G Axin2 axin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:108,917,828...108,950,783
Ensembl chr11:108,920,349...108,950,783
JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:80,165,990...80,172,786
Ensembl chr10:80,165,985...80,172,786
JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr12:104,687,740...104,751,968
Ensembl chr12:104,687,742...104,751,952
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:36,763,671...36,766,214
Ensembl chr18:36,763,671...36,766,214
JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:154,559,400...154,569,892
Ensembl chr 2:154,559,407...154,569,892
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:3,202,343...3,244,588
Ensembl chr11:3,202,392...3,244,588
JBrowse link
G Elavl1 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) involved_in
acts_upstream_of_or_within
IDA
IMP
ISO
(MGI:5922838|PMID:27609837)
(MGI:5559905|PMID:24394384)
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615)
(MGI:5287957|PMID:21613615)
CACAO
UniProt
MGI
PMID:14976220 PMID:21613615 PMID:24394384 PMID:27609837 GO_REF:0000096 MGI:3037407 MGI:4834177 MGI:5287957 MGI:5559905 MGI:5922838 NCBI chr 8:4,284,781...4,325,140
Ensembl chr 8:4,285,382...4,325,413
JBrowse link
G Fus fused in sarcoma acts_upstream_of_or_within ISO (MGI:5892207|PMID:27378374) MGI PMID:27378374 MGI:5892207 NCBI chr 7:127,966,789...127,982,032
Ensembl chr 7:127,967,457...127,985,701
JBrowse link
G Gdnf glial cell line derived neurotrophic factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:7,810,048...7,837,580
Ensembl chr15:7,810,846...7,837,575
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D acts_upstream_of_or_within ISO MGI
RGD
PMID:15192077 GO_REF:0000096 MGI:4417868 RGD:1357938 NCBI chr 5:99,955,935...99,979,130
Ensembl chr 5:99,955,935...99,978,938
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:178,321,108...178,338,891
Ensembl chr 1:178,321,108...178,337,797
JBrowse link
G Ikbke inhibitor of kappaB kinase epsilon involved_in IMP (MGI:5291883|PMID:21822257) MGI PMID:21822257 MGI:5291883 NCBI chr 1:131,254,600...131,279,601
Ensembl chr 1:131,254,343...131,279,606
JBrowse link
G Larp1 La ribonucleoprotein domain family, member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:57,973,418...58,062,034
Ensembl chr11:58,009,064...58,062,034
JBrowse link
G Mapkapk2 MAP kinase-activated protein kinase 2 acts_upstream_of_or_within IMP (MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:2158083 NCBI chr 1:131,053,700...131,097,871
Ensembl chr 1:131,053,700...131,097,826
JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:5770021|PMID:26742488)
GO_Central
UniProt
PMID:21873635 PMID:26742488 MGI:5770021 MGI:6201960 NCBI chr11:102,665,351...102,682,240
Ensembl chr11:102,663,716...102,682,237
JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within ISO MGI
RGD
PMID:21073857 GO_REF:0000096 MGI:4417868 RGD:10040969 NCBI chr 4:148,448,582...148,557,685
Ensembl chr 4:148,448,611...148,557,683
JBrowse link
G Noct nocturnin involved_in IMP (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chr 3:51,224,447...51,251,654
Ensembl chr 3:51,224,447...51,251,644
JBrowse link
G Qk quaking, KH domain containing RNA binding acts_upstream_of_or_within ISO MGI
RGD
PMID:16855020 GO_REF:0000096 MGI:4417868 RGD:10045995 NCBI chr17:10,206,471...10,319,361
Ensembl chr17:10,202,601...10,319,854
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:46,418,102...46,431,099
Ensembl chr13:46,418,434...46,431,095
JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within IDA (MGI:5644240|PMID:25397698) MGI PMID:25397698 MGI:5644240 NCBI chr 3:82,836,521...82,876,512
Ensembl chr 3:82,837,228...82,876,483
JBrowse link
G Slc11a1 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 acts_upstream_of_or_within IMP (MGI:85148|PMID:9009318) MGI PMID:9009318 MGI:85148 NCBI chr 1:74,375,014...74,386,057
Ensembl chr 1:74,375,195...74,386,062
JBrowse link
G Srsf1 serine and arginine-rich splicing factor 1 involved_in IMP
IDA
(MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr11:88,046,499...88,053,757
Ensembl chr11:88,047,373...88,053,755
JBrowse link
G Taf15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (MGI:5892207|PMID:27378374) MGI PMID:27378374 MGI:5892207 NCBI chr11:83,473,073...83,506,743
Ensembl chr11:83,473,086...83,506,743
JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:85,320,439...85,327,150
Ensembl chr 9:85,320,439...85,327,348
JBrowse link
G Tent5b terminal nucleotidyltransferase 5B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:133,480,133...133,487,940
Ensembl chr 4:133,480,132...133,487,938
JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in IMP
ISO
IBA
(MGI:5926094|PMID:28931820)
(MGI:6201960|PMID:21873635)
UniProt
MGI
GO_Central
PMID:21873635 PMID:28931820 GO_REF:0000096 MGI:4834177 MGI:5926094 MGI:6201960 NCBI chr 3:100,468,057...100,489,192
Ensembl chr 3:100,451,628...100,489,324
JBrowse link
G Tent5d terminal nucleotidyltransferase 5D involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:107,792,590...107,872,911
Ensembl chr  X:107,792,590...107,872,909
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:126,164,082...126,202,755
Ensembl chr 4:126,164,082...126,202,760
JBrowse link
G Traf2 TNF receptor-associated factor 2 involved_in IMP (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr 2:25,517,982...25,546,940
Ensembl chr 2:25,517,982...25,546,940
JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in IMP
IDA
(MGI:5291882|PMID:21822258)
(MGI:4355787|PMID:17785852)
MGI PMID:17785852 PMID:21822258 MGI:4355787 MGI:5291882 NCBI chr10:39,612,934...39,655,307
Ensembl chr10:39,612,934...39,655,307
JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in IMP (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr 1:191,997,203...192,092,599
Ensembl chr 1:191,997,205...192,092,559
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI
RGD
PMID:12881220 GO_REF:0000096 MGI:4417868 RGD:1580563 NCBI chr17:46,016,993...46,032,377
Ensembl chr17:46,016,993...46,032,369
JBrowse link
G Ybx1 Y box protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:119,277,327...119,296,265
Ensembl chr 4:119,277,981...119,294,604
JBrowse link
G Ybx2 Y box protein 2 acts_upstream_of_or_within IMP (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chr11:69,935,805...69,941,604
Ensembl chr11:69,935,796...69,941,605
JBrowse link
NAD catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Art2b ADP-ribosyltransferase 2b involved_in IDA (MGI:5426136|PMID:11011142) UniProt PMID:11011142 MGI:5426136 NCBI chr 7:101,575,729...101,585,591
Ensembl chr 7:101,576,970...101,585,600
JBrowse link
G Nudt12 nudix (nucleoside diphosphate linked moiety X)-type motif 12 involved_in
acts_upstream_of_or_within
IBA
ISO
(MGI:6201960|PMID:21873635)
(MGI:5297790|PMID:12790796)
GO_Central
MGI
PMID:12790796 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:5297790 MGI:6201960 NCBI chr17:59,000,107...59,013,367
Ensembl chr17:58,999,618...59,013,372
JBrowse link
G Nudt17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:96,705,892...96,708,916
Ensembl chr 3:96,706,067...96,708,562
JBrowse link
G Sarm1 sterile alpha and HEAT/Armadillo motif containing 1 involved_in IDA
IMP
ISO
(MGI:6114587|PMID:28334607)
(MGI:6206974|PMID:27735788), (MGI:6508517|PMID:32312889)
UniProt
MGI
PMID:27735788 PMID:28334607 PMID:32312889 GO_REF:0000096 MGI:4834177 MGI:6114587 MGI:6206974 MGI:6508517 NCBI chr11:78,470,273...78,497,816
Ensembl chr11:78,472,330...78,497,754
JBrowse link
NADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (MGI:1351390|PMID:10647999) MGI PMID:10647999 MGI:1351390 NCBI chr 5:134,220,053...134,229,628
Ensembl chr 5:134,220,053...134,229,625
JBrowse link
G Ncf2 neutrophil cytosolic factor 2 acts_upstream_of_or_within ISO (MGI:1351390|PMID:10647999) MGI PMID:10647999 MGI:1351390 NCBI chr 1:152,800,153...152,836,990
Ensembl chr 1:152,800,194...152,836,991
JBrowse link
G Nudt12 nudix (nucleoside diphosphate linked moiety X)-type motif 12 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5297790|PMID:12790796)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:12790796 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:5297790 MGI:6201960 NCBI chr17:59,000,107...59,013,367
Ensembl chr17:58,999,618...59,013,372
JBrowse link
G Nudt13 nudix (nucleoside diphosphate linked moiety X)-type motif 13 involved_in IDA (MGI:6368098|PMID:28755312) UniProt PMID:28755312 MGI:6368098 NCBI chr14:20,294,679...20,317,584
Ensembl chr14:20,294,697...20,317,578
JBrowse link
G Nudt17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:96,705,892...96,708,916
Ensembl chr 3:96,706,067...96,708,562
JBrowse link
ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:88,199,213...88,263,314
Ensembl chr 8:88,199,213...88,259,722
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase like 16 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:74,770,815...74,826,855
Ensembl chr11:74,770,830...74,828,525
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor, alpha subunit acts_upstream_of_or_within IMP
ISO
(MGI:2182584|PMID:10601318), (MGI:3029597|PMID:14663139)
(MGI:3574013|PMID:15572351)
MGI PMID:10601318 PMID:14663139 PMID:15572351 MGI:2182584 MGI:3029597 MGI:3574013 NCBI chr 4:149,104,142...149,120,653
Ensembl chr 4:149,104,146...149,120,647
JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 acts_upstream_of_or_within ISO MGI
RGD
PMID:27184051 GO_REF:0000096 MGI:4417868 RGD:13781945 NCBI chr 4:149,467,569...149,485,210
Ensembl chr 4:149,467,572...149,485,202
JBrowse link
G Pam16 presequence translocase-asssociated motor 16 homolog (S. cerevisiae) acts_upstream_of_or_within ISO MGI
RGD
PMID:24069394 GO_REF:0000096 MGI:4417868 RGD:13462066 NCBI chr16:4,616,466...4,624,946
Ensembl chr16:4,616,464...4,624,988
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:3,202,343...3,244,588
Ensembl chr11:3,202,392...3,244,588
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin acts_upstream_of_or_within ISO MGI
RGD
PMID:2001740 GO_REF:0000096 MGI:4417868 RGD:9590215 NCBI chr  X:20,549,766...20,562,089
Ensembl chr  X:20,549,787...20,562,089
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent2 terminal nucleotidyltransferase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:93,145,855...93,192,435
Ensembl chr13:93,146,282...93,192,385
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine-rich PPR-motif containing acts_upstream_of_or_within IMP
IGI
(MGI:5438202|PMID:22045337)
(MGI:5301479|PMID:21880015)
MGI PMID:21880015 PMID:22045337 MGI:5301479 MGI:5438202 NCBI chr17:84,705,247...84,790,786
Ensembl chr17:84,705,247...84,790,789
JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein involved_in
acts_upstream_of_or_within
IBA
IGI
(MGI:6201960|PMID:21873635)
(MGI:5438202|PMID:22045337)
GO_Central
MGI
PMID:21873635 PMID:22045337 MGI:5438202 MGI:6201960 NCBI chr12:87,443,896...87,449,924
Ensembl chr12:87,443,896...87,452,206
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:68,678,536...68,717,963
Ensembl chr  X:68,678,541...68,717,963
JBrowse link
G Pkp1 plakophilin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:135,871,394...135,919,207
Ensembl chr 1:135,871,395...135,919,207
JBrowse link
G Pkp3 plakophilin 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:141,078,229...141,090,511
Ensembl chr 7:141,078,218...141,090,510
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx34 DEAH (Asp-Glu-Ala-His) box polypeptide 34 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:16,197,220...16,222,078
Ensembl chr 7:16,197,147...16,222,037
JBrowse link
G Nbas neuroblastoma amplified sequence involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:13,269,101...13,637,380
Ensembl chr12:13,269,133...13,583,811
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:36,595,658...36,609,581
Ensembl chr15:36,595,661...36,609,668
JBrowse link
G Secisbp2 SECIS binding protein 2 acts_upstream_of_or_within IMP (MGI:5582859|PMID:24274065) MGI PMID:24274065 MGI:5582859 NCBI chr13:51,651,682...51,684,044
Ensembl chr13:51,651,697...51,684,044
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:69,497,952...69,534,236
Ensembl chr13:69,497,959...69,534,617
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:88,199,213...88,263,314
Ensembl chr 8:88,199,213...88,259,722
JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:94,209,842...94,215,495
Ensembl chr11:94,211,454...94,215,495
JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 nrde-2 necessary for RNA interference, domain containing involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:100,125,450...100,160,414
Ensembl chr12:100,125,452...100,159,653
JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtap methylthioadenosine phosphorylase NOT|involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chr 4:89,137,370...89,181,090
Ensembl chr 4:89,137,122...89,181,081
JBrowse link
G Pnp2 purine-nucleoside phosphorylase 2 involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chr14:50,956,141...50,964,751
Ensembl chr14:50,955,992...50,964,749
JBrowse link
nonfunctional rRNA decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:115,088,355...115,090,158
Ensembl chr13:115,088,355...115,090,186
JBrowse link
nuclear histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssb Sjogren syndrome antigen B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:69,861,562...69,871,846
Ensembl chr 2:69,861,562...69,871,846
JBrowse link
nuclear mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dxo decapping exoribonuclease involved_in IMP (MGI:5488528|PMID:23523372) UniProt PMID:23523372 MGI:5488528 NCBI chr17:34,836,996...34,839,187
Ensembl chr17:34,837,019...34,839,233
JBrowse link
G Exosc10 exosome component 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
G Exosc4 exosome component 4 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr15:76,327,397...76,330,670
Ensembl chr15:76,327,397...76,330,677
JBrowse link
G Exosc5 exosome component 5 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:25,659,153...25,668,032
Ensembl chr 7:25,659,164...25,671,368
JBrowse link
G Exosc6 exosome component 6 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:111,056,339...111,057,664
Ensembl chr 8:111,056,339...111,057,664
JBrowse link
G Exosc7 exosome component 7 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:123,113,231...123,136,129
Ensembl chr 9:123,113,215...123,136,129
JBrowse link
G Exosc8 exosome component 8 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:54,728,679...54,735,364
Ensembl chr 3:54,728,678...54,735,393
JBrowse link
G Exosc9 exosome component 9 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 3:36,552,606...36,565,727
Ensembl chr 3:36,552,606...36,565,727
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:95,954,750...96,057,806
Ensembl chr 9:95,954,760...96,057,803
JBrowse link
nuclear polyadenylation-dependent antisense transcript catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
nuclear polyadenylation-dependent CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc7 exosome component 7 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:123,113,231...123,136,129
Ensembl chr 9:123,113,215...123,136,129
JBrowse link
G Exosc8 exosome component 8 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:54,728,679...54,735,364
Ensembl chr 3:54,728,678...54,735,393
JBrowse link
G Exosc9 exosome component 9 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:36,552,606...36,565,727
Ensembl chr 3:36,552,606...36,565,727
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:29,130,129...29,161,827
Ensembl chr11:29,130,744...29,161,828
JBrowse link
nuclear polyadenylation-dependent rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
G Exosc2 exosome component 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:31,670,715...31,681,352
Ensembl chr 2:31,670,715...31,681,349
JBrowse link
G Exosc3 exosome component 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732
JBrowse link
G Exosc7 exosome component 7 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:123,113,231...123,136,129
Ensembl chr 9:123,113,215...123,136,129
JBrowse link
G Exosc8 exosome component 8 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:54,728,679...54,735,364
Ensembl chr 3:54,728,678...54,735,393
JBrowse link
G Exosc9 exosome component 9 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 3:36,552,606...36,565,727
Ensembl chr 3:36,552,606...36,565,727
JBrowse link
nuclear polyadenylation-dependent snoRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
nuclear polyadenylation-dependent snRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
nuclear polyadenylation-dependent tRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
G Exosc2 exosome component 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:31,670,715...31,681,352
Ensembl chr 2:31,670,715...31,681,349
JBrowse link
G Exosc3 exosome component 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732
JBrowse link
G Exosc7 exosome component 7 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:123,113,231...123,136,129
Ensembl chr 9:123,113,215...123,136,129
JBrowse link
G Exosc8 exosome component 8 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:54,728,679...54,735,364
Ensembl chr 3:54,728,678...54,735,393
JBrowse link
G Exosc9 exosome component 9 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:36,552,606...36,565,727
Ensembl chr 3:36,552,606...36,565,727
JBrowse link
nuclear retention of pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcid2 PCI domain containing 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:13,075,476...13,105,343
Ensembl chr 8:13,077,189...13,105,459
JBrowse link
nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc2 exosome component 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:31,670,715...31,681,352
Ensembl chr 2:31,670,715...31,681,349
JBrowse link
G Exosc3 exosome component 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732
JBrowse link
nuclear retention of unspliced pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc10 exosome component 10 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
G Prpf18 pre-mRNA processing factor 18 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:4,622,058...4,652,135
Ensembl chr 2:4,622,058...4,652,113
JBrowse link
nuclear-transcribed mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC catalytic subunit 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:126,435,012...126,468,707
Ensembl chr 4:126,435,012...126,468,583
JBrowse link
G Ddx5 DEAD box helicase 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:106,780,355...106,789,185
Ensembl chr11:106,780,355...106,789,185
JBrowse link
G Dhx34 DEAH (Asp-Glu-Ala-His) box polypeptide 34 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:16,197,220...16,222,078
Ensembl chr 7:16,197,147...16,222,037
JBrowse link
G Dxo decapping exoribonuclease involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:34,836,996...34,839,187
Ensembl chr17:34,837,019...34,839,233
JBrowse link
G Exosc10 exosome component 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:148,558,419...148,582,401
Ensembl chr 4:148,558,429...148,582,401
JBrowse link
G Exosc4 exosome component 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:76,327,397...76,330,670
Ensembl chr15:76,327,397...76,330,677
JBrowse link
G Exosc9 exosome component 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:36,552,606...36,565,727
Ensembl chr 3:36,552,606...36,565,727
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:25,785,318...25,803,975
Ensembl chr 8:25,785,288...25,803,975
JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 6:91,516,035...91,522,620
Ensembl chr 6:91,515,928...91,522,625
JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:70,673,231...70,678,752
Ensembl chr 8:70,673,248...70,678,752
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:80,852,825...80,855,209
Ensembl chr10:80,852,821...80,855,209
JBrowse link
G Mrto4 mRNA turnover 4, ribosome maturation factor involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:139,347,440...139,352,576
Ensembl chr 4:139,347,435...139,352,576
JBrowse link
G Nbas neuroblastoma amplified sequence involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:13,269,101...13,637,380
Ensembl chr12:13,269,133...13,583,811
JBrowse link
G Nbdy negative regulator of P-body association involved_in ISO (PMID:27918561) UniProt PMID:27918561 NCBI chr  X:153,723,477...153,741,302
Ensembl chr  X:153,723,590...153,741,920
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 acts_upstream_of_or_within ISO MGI
RGD
PMID:15039777 GO_REF:0000096 MGI:4417868 RGD:10045958 NCBI chr10:79,854,432...79,864,435
Ensembl chr10:79,854,427...79,864,771
JBrowse link
G Rc3h1 RING CCCH (C3H) domains 1 involved_in IMP
ISO
(MGI:4819285|PMID:20639877) BHF-UCL
MGI
PMID:20639877 GO_REF:0000096 MGI:4819285 MGI:4834177 NCBI chr 1:160,906,411...160,974,976
Ensembl chr 1:160,906,418...160,974,978
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:126,164,082...126,202,755
Ensembl chr 4:126,164,082...126,202,760
JBrowse link
G Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:70,331,493...70,353,423
Ensembl chr 8:70,331,525...70,353,278
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 9:95,954,750...96,057,806
Ensembl chr 9:95,954,760...96,057,803
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:147,012,755...147,078,000
Ensembl chr 2:147,012,996...147,078,000
JBrowse link
nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Skiv2l superkiller viralicidic activity 2-like (S. cerevisiae) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:34,839,226...34,850,204
Ensembl chr17:34,839,228...34,850,210
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:95,718,931...95,808,113
Ensembl chr 8:95,719,451...95,807,464
JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like acts_upstream_of_or_within IMP (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 5:96,070,333...96,164,198
Ensembl chr 5:96,070,333...96,164,171
JBrowse link
G Pde12 phosphodiesterase 12 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr14:26,664,117...26,669,846
Ensembl chr14:26,659,958...26,669,883
JBrowse link
G Polr2d polymerase (RNA) II (DNA directed) polypeptide D involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:31,789,125...31,796,709
Ensembl chr18:31,789,159...31,796,701
JBrowse link
G Rc3h1 RING CCCH (C3H) domains 1 involved_in IMP
IBA
(MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 MGI:6201960 NCBI chr 1:160,906,411...160,974,976
Ensembl chr 1:160,906,418...160,974,978
JBrowse link
G Rc3h2 ring finger and CCCH-type zinc finger domains 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:37,368,861...37,424,370
Ensembl chr 2:37,370,069...37,422,903
JBrowse link
G Zfp36 zinc finger protein 36 acts_upstream_of_or_within
involved_in
IDA
ISO
(MGI:3589099|PMID:15814898) MGI PMID:15814898 GO_REF:0000096 MGI:3589099 MGI:4834177 NCBI chr 7:28,376,784...28,379,228
Ensembl chr 7:28,376,784...28,380,253
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within IDA (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chr12:80,107,760...80,113,013
Ensembl chr12:80,107,754...80,113,013
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 acts_upstream_of_or_within IDA (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chr17:84,183,924...84,187,947
Ensembl chr17:84,183,931...84,187,947
JBrowse link
G Zfp36l3 zinc finger protein 36, C3H type-like 3 acts_upstream_of_or_within IDA (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chr  X:53,772,686...53,776,394
Ensembl chr  X:53,774,048...53,776,394
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 zinc finger protein 36 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:28,376,784...28,379,228
Ensembl chr 7:28,376,784...28,380,253
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in
acts_upstream_of_or_within
ISO PMID:11279239 UniProt
MGI
PMID:11279239 GO_REF:0000096 MGI:4417868 RGD:11344953 NCBI chr12:80,107,760...80,113,013
Ensembl chr12:80,107,754...80,113,013
JBrowse link
nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:70,331,493...70,353,423
Ensembl chr 8:70,331,525...70,353,278
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:5751631|PMID:26255671)
GO_Central
UniProt
PMID:21873635 PMID:26255671 MGI:5751631 MGI:6201960 NCBI chr 4:125,118,414...125,127,881
Ensembl chr 4:125,118,423...125,127,840
JBrowse link
nuclear-transcribed mRNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:86,701,924...87,050,097
Ensembl chr 1:86,703,808...87,050,095
JBrowse link
G Pan2 PAN2 poly(A) specific ribonuclease subunit acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr10:128,303,333...128,321,358
Ensembl chr10:128,303,335...128,321,358
JBrowse link
G Polr2g polymerase (RNA) II (DNA directed) polypeptide G involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr19:8,793,129...8,798,557
Ensembl chr19:8,793,127...8,798,577
JBrowse link
nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:86,701,924...87,050,097
Ensembl chr 1:86,703,808...87,050,095
JBrowse link
G Exosc2 exosome component 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:31,670,715...31,681,352
Ensembl chr 2:31,670,715...31,681,349
JBrowse link
G Exosc3 exosome component 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732
JBrowse link
G Exosc4 exosome component 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr15:76,327,397...76,330,670
Ensembl chr15:76,327,397...76,330,677
JBrowse link
G Exosc5 exosome component 5 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:25,659,153...25,668,032
Ensembl chr 7:25,659,164...25,671,368
JBrowse link
G Exosc6 exosome component 6 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:111,056,339...111,057,664
Ensembl chr 8:111,056,339...111,057,664
JBrowse link
G Exosc7 exosome component 7 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:123,113,231...123,136,129
Ensembl chr 9:123,113,215...123,136,129
JBrowse link
G Exosc8 exosome component 8 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:54,728,679...54,735,364
Ensembl chr 3:54,728,678...54,735,393
JBrowse link
G Exosc9 exosome component 9 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:36,552,606...36,565,727
Ensembl chr 3:36,552,606...36,565,727
JBrowse link
G Ttc37 tetratricopeptide repeat domain 37 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:76,098,705...76,190,318
Ensembl chr13:76,098,734...76,190,316
JBrowse link
nuclear-transcribed mRNA catabolic process, no-go decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:49,671,497...49,713,401
Ensembl chr11:49,671,503...49,712,723
JBrowse link
G Csde1 cold shock domain containing E1, RNA binding involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:103,020,431...103,058,186
Ensembl chr 3:103,020,426...103,058,186
JBrowse link
G Gtpbp2 GTP binding protein 2 acts_upstream_of_or_within IMP (MGI:5574482|PMID:25061210) MGI PMID:25061210 MGI:5574482 NCBI chr17:46,159,227...46,169,370
Ensembl chr17:46,161,032...46,169,370
JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:115,088,355...115,090,158
Ensembl chr13:115,088,355...115,090,186
JBrowse link
nuclear-transcribed mRNA catabolic process, non-stop decay term browser