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ONTOLOGY REPORT - ANNOTATIONS


Term:heterocycle catabolic process
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Accession:GO:0046700 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
Synonyms:exact_synonym: heterocycle breakdown;   heterocycle catabolism;   heterocycle degradation


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10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 involved_in IEA UniProt GO_REF:0000104 NCBI chr10:33,310,523...33,365,677
Ensembl chr10:33,310,558...33,365,228
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:6,523,894...6,724,010
Ensembl chr28:6,529,212...6,723,454
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:48,404,351...48,456,360
Ensembl chr23:48,407,316...48,456,654
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:35,825,154...35,827,913
Ensembl chr 2:35,825,636...35,827,840
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:16126846)
(PMID:28275056)
UniProt
CACAO
PMID:16126846 PMID:28275056 NCBI chr20:53,746,656...53,755,388
Ensembl chr20:53,745,742...53,756,870
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:62,872,607...62,896,208
Ensembl chr17:62,872,756...62,896,395
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:56,193,824...56,202,340
Ensembl chr 5:56,194,583...56,202,293
JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 1:51,800,294...51,956,891
Ensembl chr 1:51,800,309...51,952,714
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chr35:16,255,076...16,294,967 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,265,836...25,312,417
Ensembl chr 7:25,233,235...25,305,174
JBrowse link
G TARDBP TAR DNA binding protein involved_in ISO (PMID:28335005) CACAO PMID:28335005 NCBI chr 2:84,987,752...84,998,136
Ensembl chr 2:84,989,952...84,998,593
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:3,888,287...3,959,910
Ensembl chr23:3,893,647...3,960,411
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr15:4,972,369...4,984,218
Ensembl chr15:4,972,956...4,980,371
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr 1:40,249,856...40,279,344
Ensembl chr 1:40,259,705...40,279,888
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,815,972...113,818,093
Ensembl chr 1:113,816,273...113,818,065
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:42,663,287...42,668,665
Ensembl chr 8:42,664,223...42,668,514
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,746,952...45,751,268
Ensembl chr10:45,748,936...45,751,250
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGEL2 angel homolog 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:11,112,077...11,130,736
Ensembl chr 7:11,114,059...11,152,197
JBrowse link
G BOLL boule homolog, RNA binding protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr37:7,167,993...7,216,590
Ensembl chr37:7,169,192...7,216,590
JBrowse link
G DAZL deleted in azoospermia like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:26,194,061...26,212,506 JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in ISO (PMID:19029303)
(MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:26489465), (PMID:29180010)
UniProt PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 MGI:6105829 NCBI chr20:52,648,878...52,677,578 JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:10,885,161...10,977,383
Ensembl chr15:10,887,347...11,027,621
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chr11:25,464,601...25,467,460
Ensembl chr11:25,466,185...25,467,117
JBrowse link
G LOC475399 heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) UniProt PMID:16010978 NCBI chr15:18,239,810...18,299,065 JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) UniProt PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr 7:5,873,088...5,903,484
Ensembl chr 7:5,814,201...5,902,220
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:7,901,578...7,905,274
Ensembl chr23:7,901,250...7,904,534
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr20:57,806,450...57,818,435
Ensembl chr20:57,807,826...57,818,359
JBrowse link
G RBM10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367529|PMID:19508861) Ensembl
MGI
PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:40,746,959...40,776,764
Ensembl chr  X:40,747,178...40,776,742
JBrowse link
G RBM38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chr24:42,396,356...42,410,543
Ensembl chr24:42,396,352...42,409,240
JBrowse link
G TARDBP TAR DNA binding protein involved_in ISO (PMID:17481916) BHF-UCL PMID:17481916 NCBI chr 2:84,987,752...84,998,136
Ensembl chr 2:84,989,952...84,998,593
JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chr 5:8,222,217...8,237,595
Ensembl chr 5:8,221,794...8,226,074
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,815,972...113,818,093
Ensembl chr 1:113,816,273...113,818,065
JBrowse link
5-methylcytosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET1 tet methylcytosine dioxygenase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 4:19,759,661...19,898,345
Ensembl chr 4:19,768,137...19,889,907
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr32:26,021,745...26,145,109
Ensembl chr32:26,059,693...26,143,536
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 involved_in IEA UniProt GO_REF:0000104 NCBI chr17:48,976,510...49,083,454
Ensembl chr17:48,981,558...49,082,675
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,361,301...24,379,807
Ensembl chr 5:24,361,301...24,379,812
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2137102|PMID:11415433) Ensembl
MGI
PMID:11415433 GO_REF:0000107 MGI:2137102 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC491890 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,061,199...44,068,750 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:3,559,347...3,687,026
Ensembl chr12:3,567,206...3,687,026
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:33,627,441...33,644,350
Ensembl chr15:33,627,846...33,641,795
JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(PMID:8894685)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
(MGI:1861066|PMID:10899903), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377)
(MGI:74163|PMID:7670465)
(MGI:2151677|PMID:11591798), (MGI:3531253|PMID:8663040)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
GO_Central
MGI
Ensembl
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 PMID:7731963 PMID:8663040 PMID:8894685 PMID:9272950 PMID:9478961 PMID:10720488 PMID:10899903 PMID:11591798 PMID:14607964 PMID:15630442 PMID:16841096 PMID:18340377 PMID:21873635 GO_REF:0000107 MGI:1095761 MGI:1861066 MGI:2151677 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:49990 MGI:59127 MGI:72798 MGI:74163 MGI:76875 MGI:83255 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADA2 adenosine deaminase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:44,883,573...44,912,930
Ensembl chr27:44,884,882...44,912,850
JBrowse link
G ADAL adenosine deaminase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:10,191,019...10,214,089
Ensembl chr30:10,194,606...10,216,875
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO (MGI:3760051|PMID:17502665) MGI PMID:17502665 MGI:3760051 NCBI chr28:9,181,851...9,311,835
Ensembl chr28:9,211,050...9,323,939
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,491,028...45,520,019
Ensembl chr12:45,491,733...45,518,405
JBrowse link
G NUDT9 nudix hydrolase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2158549|PMID:11825615) Ensembl
MGI
PMID:11825615 GO_REF:0000107 MGI:2158549 NCBI chr32:10,862,532...10,887,162
Ensembl chr32:10,862,527...10,886,863
JBrowse link
aflatoxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC474938 glutathione S-transferase A2 acts_upstream_of_or_within ISO (MGI:4429761|PMID:19850059) MGI PMID:19850059 MGI:4429761 NCBI chr12:20,349,133...20,365,023 JBrowse link
G NFE2L2 nuclear factor, erythroid 2 like 2 ISO RGD PMID:27071940 RGD:12910550 NCBI chr36:20,989,205...21,087,044
Ensembl chr36:20,989,360...21,012,524
JBrowse link
allantoin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALLC allantoicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:2,185,371...2,215,256
Ensembl chr17:2,185,432...2,215,248
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr15:3,209,771...3,230,104
Ensembl chr15:3,209,869...3,222,983
JBrowse link
G NT5C1B 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) MGI PMID:11690631 MGI:2153435 NCBI chr17:13,848,736...13,870,933 JBrowse link
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3770326|PMID:16547283)
GO_Central
MGI
RGD
PMID:16547283 PMID:21414400 PMID:21873635 MGI:3770326 RGD:5134346 NCBI chr12:45,491,028...45,520,019
Ensembl chr12:45,491,733...45,518,405
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:85,364,819...85,372,473
Ensembl chr 2:85,364,851...85,373,772
JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(PMID:15572351)
GO_Central
MGI
Ensembl
RGD
PMID:11425895 PMID:15572351 PMID:21873635 GO_REF:0000107 RGD:628524 NCBI chr 5:58,340,183...58,355,353
Ensembl chr 5:58,339,634...58,354,326
JBrowse link
G DICER1 dicer 1, ribonuclease III involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2385551|PMID:12050166)
GO_Central
MGI
PMID:12050166 PMID:21873635 MGI:2385551 NCBI chr20:32,350,138...32,379,240
Ensembl chr20:32,358,110...32,379,245
JBrowse link
G DNASE2B deoxyribonuclease 2 beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:63,465,477...63,481,893
Ensembl chr 6:63,466,106...63,481,723
JBrowse link
G ENDOG endonuclease G involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3029597|PMID:14663139)
GO_Central
MGI
PMID:14663139 PMID:21873635 MGI:3029597 NCBI chr 9:54,809,470...54,812,795
Ensembl chr 9:54,809,530...54,813,042
JBrowse link
G EXOG exo/endonuclease G involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:8,231,469...8,260,572
Ensembl chr23:8,231,484...8,258,710
JBrowse link
G FOXL2 forkhead box L2 involved_in ISO (PMID:16153597) UniProt PMID:16153597 NCBI chr23:35,145,856...35,147,185 JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE4A phosphodiesterase 4A involved_in IEA UniProt GO_REF:0000041 NCBI chr20:50,672,012...50,723,318
Ensembl chr20:50,672,363...50,811,160
JBrowse link
G PDE4B phosphodiesterase 4B involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:44,063,145...44,606,070
Ensembl chr 5:44,065,106...44,500,999
JBrowse link
G PDE4C phosphodiesterase 4C involved_in IEA UniProt GO_REF:0000041 NCBI chr20:44,767,187...44,792,887
Ensembl chr20:44,742,161...44,791,053
JBrowse link
G PDE4D phosphodiesterase 4D involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 2:45,843,767...47,245,263
Ensembl chr 2:45,846,294...46,949,912
JBrowse link
G PDE8A phosphodiesterase 8A involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:54,278,498...54,367,492
Ensembl chr 3:54,128,680...54,367,400
JBrowse link
G SLC28A1 solute carrier family 28 member 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:54,128,172...54,177,544
Ensembl chr 3:54,128,680...54,367,400
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr36:25,250,398...25,591,775
Ensembl chr36:25,256,314...25,578,768
JBrowse link
G PDE2A phosphodiesterase 2A involved_in IBA
IEA
ISS
(PMID:21873635) GO_Central
Ensembl
UniProt
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr21:25,542,030...25,635,661
Ensembl chr21:25,542,268...25,635,660
JBrowse link
G PDE5A phosphodiesterase 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2450821|PMID:12554648) UniProt
MGI
PMID:12554648 GO_REF:0000041 MGI:2450821 NCBI chr32:38,272,573...38,407,517
Ensembl chr32:38,244,338...38,407,522
JBrowse link
G PDE9A phosphodiesterase 9A involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr31:36,949,777...37,036,237
Ensembl chr31:36,949,723...37,035,809
JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr18:108,215...120,213 JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUBN cubilin ISO RGD PMID:14576052 RGD:8554807 NCBI chr 2:19,784,125...20,041,840
Ensembl chr 2:19,784,198...20,041,839
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2137102|PMID:11415433)
GO_Central
MGI
PMID:11415433 PMID:21873635 MGI:2137102 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
coumarin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2A7 cytochrome P450, family 2, subfamily A, polypeptide 7 involved_in ISO (PMID:19029318) BHF-UCL PMID:19029318 NCBI chr 1:112,900,508...112,906,745
Ensembl chr 1:112,900,403...112,907,076
JBrowse link
G PON3 paraoxonase 3 ISO RGD PMID:12946270 RGD:1303961 NCBI chr14:20,615,180...20,642,807
Ensembl chr14:20,565,641...20,642,985
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,199,287...25,240,693
Ensembl chr 9:25,198,805...25,240,578
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:45,613,947...45,644,879
Ensembl chr12:45,618,234...45,644,778
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chr15:646,301...666,347
Ensembl chr15:646,584...666,329
JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,565,173...12,601,152
Ensembl chr28:12,564,727...12,600,240
JBrowse link
CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:26,908,502...26,935,368
Ensembl chr22:26,909,409...26,935,033
JBrowse link
G EXOSC10 exosome component 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:53,266,396...53,276,236
Ensembl chr 9:53,266,401...53,276,677
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
JBrowse link
cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:20,888,350...20,896,139
Ensembl chr 9:20,886,574...20,896,079
JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA
ISS
GOC
UniProt
GO_REF:0000024 GO_REF:0000108 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IEA GOC GO_REF:0000108 NCBI chr27:37,102,728...37,114,084
Ensembl chr27:37,103,016...37,114,556
JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 involved_in IEA GOC GO_REF:0000108 NCBI chr12:9,808,276...9,819,973
Ensembl chr12:9,808,297...9,819,985
JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 involved_in IEA GOC GO_REF:0000108
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 involved_in IEA GOC GO_REF:0000108 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808
JBrowse link
G CDA cytidine deaminase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:675715 PMID:21873635 RGD:2316616 NCBI chr 2:78,305,328...78,327,229
Ensembl chr 2:78,304,726...78,327,247
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:2,443,459...2,489,147
Ensembl chr22:2,436,206...2,489,016
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:35,139,580...35,144,066
Ensembl chr25:35,140,969...35,143,063
JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr15:3,209,771...3,230,104
Ensembl chr15:3,209,869...3,222,983
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr15:17,808,454...17,815,987
Ensembl chr15:17,808,461...17,815,676
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:74163|PMID:7670465)
(MGI:76875|PMID:7592575)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964)
(MGI:72798|PMID:7731963)
Ensembl
MGI
PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 GO_REF:0000107 MGI:2155238 MGI:3619310 MGI:72798 MGI:74163 MGI:76875 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902
JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:73237|PMID:7744869) MGI PMID:7744869 MGI:73237 NCBI chr18:108,215...120,213 JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA2D4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr27:43,840,190...43,961,067
Ensembl chr27:43,844,529...44,041,637
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr16:40,554,214...40,571,841
Ensembl chr16:40,555,565...40,571,720
JBrowse link
G DCP1A decapping mRNA 1A involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr20:36,597,457...36,661,362
Ensembl chr20:36,597,178...36,657,756
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr27:43,987,778...44,041,661
Ensembl chr27:43,844,529...44,041,637
JBrowse link
G DCP2 decapping mRNA 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 4:35,256,772...35,298,974
Ensembl chr 4:35,256,970...35,299,021
JBrowse link
G DCPS decapping enzyme, scavenger involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 5:8,168,887...8,212,582
Ensembl chr 5:8,172,313...8,212,832
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:27,304,257...27,315,389
Ensembl chr16:27,304,198...27,315,233
JBrowse link
G NOCT nocturnin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr19:3,587,769...3,612,184
Ensembl chr19:3,588,695...3,609,307
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr25:11,416,321...11,550,830
Ensembl chr25:11,417,657...11,550,810
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:37,109,288...37,138,756
Ensembl chr18:37,109,410...37,137,156
JBrowse link
G PATL2 PAT1 homolog 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:11,306,972...11,316,454
Ensembl chr30:11,307,492...11,316,427
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP1A decapping mRNA 1A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:36,597,457...36,661,362
Ensembl chr20:36,597,178...36,657,756
JBrowse link
G DCP1B decapping mRNA 1B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:43,987,778...44,041,661
Ensembl chr27:43,844,529...44,041,637
JBrowse link
G EDC3 enhancer of mRNA decapping 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:37,720,063...37,770,948
Ensembl chr30:37,721,656...37,770,145
JBrowse link
G EDC4 enhancer of mRNA decapping 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:81,602,323...81,613,283
Ensembl chr 5:81,602,328...81,613,252
JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:74163|PMID:7670465)
(MGI:76875|PMID:7592575)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
Ensembl
MGI
PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 PMID:10720488 PMID:14607964 GO_REF:0000107 MGI:1095761 MGI:2155238 MGI:3619310 MGI:3640719 MGI:72798 MGI:74163 MGI:76875 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr15:17,808,454...17,815,987
Ensembl chr15:17,808,461...17,815,676
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:85,506,598...85,586,212
Ensembl chr 1:85,444,917...85,586,163
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr15:17,808,454...17,815,987
Ensembl chr15:17,808,461...17,815,676
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in ISO (PMID:9226884) UniProt PMID:9226884 NCBI chr27:30,675,225...30,741,202
Ensembl chr27:30,675,247...30,817,388
JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:11,715,215...11,718,622
Ensembl chr12:11,715,271...11,718,717
JBrowse link
deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase involved_in IEA UniProt GO_REF:0000104 NCBI chr24:18,070,980...18,081,815
Ensembl chr24:18,064,983...18,082,163
JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr27:30,675,225...30,741,202
Ensembl chr27:30,675,247...30,817,388
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic acts_upstream_of_or_within ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:42,080,654...42,117,919
Ensembl chr 5:42,080,645...42,117,741
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:23601106), (PMID:26294762) UniProt PMID:23601106 PMID:26294762 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902
JBrowse link
G STRAP serine/threonine kinase receptor associated protein involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr27:30,800,853...30,817,578
Ensembl chr27:30,675,247...30,817,388
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:35,139,580...35,144,066
Ensembl chr25:35,140,969...35,143,063
JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:85,506,598...85,586,212
Ensembl chr 1:85,444,917...85,586,163
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr15:3,209,771...3,230,104
Ensembl chr15:3,209,869...3,222,983
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407) MGI PMID:5560407 MGI:6478530 NCBI chr28:15,525,581...15,621,287
Ensembl chr28:15,526,790...15,621,235
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:3,416,702...3,424,607
Ensembl chr22:3,416,578...3,424,409
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902
JBrowse link
diadenosine hexaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC491890 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,061,199...44,068,750 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:3,559,347...3,687,026
Ensembl chr12:3,567,206...3,687,026
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:33,627,441...33,644,350
Ensembl chr15:33,627,846...33,641,795
JBrowse link
diadenosine pentaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC491890 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,061,199...44,068,750 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:3,559,347...3,687,026
Ensembl chr12:3,567,206...3,687,026
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:33,627,441...33,644,350
Ensembl chr15:33,627,846...33,641,795
JBrowse link
diadenosine triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FHIT fragile histidine triad diadenosine triphosphatase involved_in IEA
ISO
Ensembl
RGD
PMID:16359767 GO_REF:0000107 RGD:2289929 NCBI chr20:29,735,380...31,113,859
Ensembl chr20:30,356,572...31,113,859
JBrowse link
dibenzo-p-dioxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO 2,3,7,8-tetrachlorodibenzo-p-dioxin RGD PMID:12914780 PMID:15812643 RGD:2306662 RGD:2306673 NCBI chr30:37,793,277...37,799,535
Ensembl chr30:37,793,508...37,796,866
JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 acts_upstream_of_or_within ISO (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chr23:28,498,730...28,500,998
Ensembl chr23:28,498,652...28,499,998
JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFB DNA fragmentation factor subunit beta involved_in ISO (PMID:19944011) CAFA PMID:19944011 NCBI chr 5:58,340,183...58,355,353
Ensembl chr 5:58,339,634...58,354,326
JBrowse link
G DNASE1 deoxyribonuclease 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 6:37,596,735...37,599,953
Ensembl chr 6:37,595,911...37,599,827
JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:122,101,992...122,109,240
Ensembl chr  X:122,101,992...122,109,165
JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr 6:38,741,200...38,743,951 JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within ISO (MGI:5308183|PMID:21307874) MGI PMID:21307874 MGI:5308183
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr20:32,350,138...32,379,240
Ensembl chr20:32,358,110...32,379,245
JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3834787|PMID:18724932), (MGI:4414715|PMID:19923437), (MGI:5562498|PMID:23993650)
(MGI:5637600|PMID:25848017)
(MGI:4848004|PMID:20871604)
Ensembl
MGI
PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 GO_REF:0000107 MGI:3834787 MGI:4414715 MGI:4848004 MGI:5562498 MGI:5637600 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906
JBrowse link
DNA catabolic process, endonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNASE1 deoxyribonuclease 1 involved_in ISS
IBA
IEA
(PMID:29191910)
(PMID:21873635)
UniProt
GO_Central
Ensembl
PMID:21873635 PMID:29191910 GO_REF:0000107 NCBI chr 6:37,596,735...37,599,953
Ensembl chr 6:37,595,911...37,599,827
JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:122,101,992...122,109,240
Ensembl chr  X:122,101,992...122,109,165
JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr 6:38,741,200...38,743,951 JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:32,350,138...32,379,240
Ensembl chr20:32,358,110...32,379,245
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:49,299,236...49,301,815
Ensembl chr20:49,299,406...49,301,814
JBrowse link
G FBH1 F-box DNA helicase 1 acts_upstream_of_or_within ISO (PMID:23361013) MGI PMID:23361013 NCBI chr 2:30,047,994...30,095,761
Ensembl chr 2:30,048,567...30,095,696
JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within ISO (PMID:23361013) MGI PMID:23361013 NCBI chr18:51,396,980...51,404,563
Ensembl chr18:51,396,980...51,402,534
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:49,827,584...49,834,872
Ensembl chr 9:49,828,067...49,836,632
JBrowse link
G SETMAR SET domain without mariner transposase fusion involved_in ISO (PMID:20521842), (PMID:21491884)
(PMID:24573677)
UniProt PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr20:13,214,241...13,224,020
Ensembl chr20:13,214,241...13,224,020
JBrowse link
DNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISG20 interferon stimulated exonuclease gene 20 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:51,822,642...51,833,665
Ensembl chr 3:51,822,888...51,833,659
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:49,827,584...49,834,872
Ensembl chr 9:49,828,067...49,836,632
JBrowse link
G TREX2 three prime repair exonuclease 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:121,263,341...121,265,009
Ensembl chr  X:121,258,646...121,264,555
JBrowse link
G XRN2 5'-3' exoribonuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:2,042,521...2,128,942
Ensembl chr24:2,042,888...2,128,867
JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,626,001...19,683,819
Ensembl chr 4:19,626,977...19,684,660
JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr18:54,680,627...54,686,502
Ensembl chr18:54,681,760...54,682,902
JBrowse link
G RNASEH2A ribonuclease H2 subunit A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:49,345,258...49,352,944
Ensembl chr20:49,345,266...49,355,167
JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:2183137|PMID:12077348) MGI PMID:12077348 MGI:2183137 NCBI chr18:108,215...120,213 JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2388903|PMID:12234672) Ensembl
MGI
PMID:12234672 GO_REF:0000107 MGI:2388903 NCBI chr 5:42,080,654...42,117,919
Ensembl chr 5:42,080,645...42,117,741
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:6478539|PMID:14154460) MGI PMID:14154460 MGI:6478539 NCBI chr18:108,215...120,213 JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:1315924 PMID:3032103 PMID:21873635 GO_REF:0000104 RGD:2300191 RGD:2301218 NCBI chr30:14,572,766...14,585,621
Ensembl chr30:14,572,602...14,585,530
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:1,209,732...1,277,435
Ensembl chr11:1,212,546...1,270,997
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:40,554,214...40,571,841
Ensembl chr16:40,555,565...40,571,720
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:54,935,476...54,956,000
Ensembl chr 4:54,938,961...54,954,416
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:53,266,396...53,276,236
Ensembl chr 9:53,266,401...53,276,677
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
JBrowse link
G EXOSC5 exosome component 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,599,519...112,609,039
Ensembl chr 1:112,599,568...112,608,941
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:43,343,573...43,379,614
Ensembl chr20:43,343,573...43,379,574
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:3,698,399...3,708,342
Ensembl chr25:3,698,483...3,769,683
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:18,324,117...18,336,628
Ensembl chr19:18,324,119...18,336,602
JBrowse link
fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FITM2 fat storage inducing transmembrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:31,810,511...31,814,547
Ensembl chr24:31,810,263...31,814,870
JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFS methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chr 3:57,480,935...57,514,836 JBrowse link
G PM20D2 peptidase M20 domain containing 2 NOT|involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:48,402,912...48,416,239
Ensembl chr12:48,339,346...48,415,732
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:34,032,104...34,067,772
Ensembl chr25:34,032,055...34,063,281
JBrowse link
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:35,139,580...35,144,066
Ensembl chr25:35,140,969...35,143,063
JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:85,506,598...85,586,212
Ensembl chr 1:85,444,917...85,586,163
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 NOT|involved_in ISO (PMID:21054786) UniProt PMID:21054786 NCBI chr 2:8,551,008...8,643,710
Ensembl chr 2:8,559,319...8,642,533
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
guanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:85,506,598...85,586,212
Ensembl chr 1:85,444,917...85,586,163
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
heme catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLVRA biliverdin reductase A involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr18:6,424,833...6,506,399
Ensembl chr18:6,426,255...6,495,647
JBrowse link
G BLVRB biliverdin reductase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,244,484...113,258,170
Ensembl chr 1:113,244,503...113,258,073
JBrowse link
G HMOX1 heme oxygenase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:15226268 PMID:21873635 RGD:1547877 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773
JBrowse link
G HMOX2 heme oxygenase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:36,881,073...36,898,062
Ensembl chr 6:36,881,506...36,898,042
JBrowse link
heme oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773
JBrowse link
G HMOX2 heme oxygenase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:36,881,073...36,898,062
Ensembl chr 6:36,881,506...36,898,042
JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNMT histamine N-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:40,656,266...40,702,498
Ensembl chr19:40,655,161...40,702,218
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISO (PMID:16086026) UniProt PMID:16086026 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:35,256,772...35,298,974
Ensembl chr 4:35,256,970...35,299,021
JBrowse link
G ERI1 exoribonuclease 1 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr16:35,441,304...35,499,501
Ensembl chr16:35,473,913...35,499,487
JBrowse link
G EXOSC10 exosome component 10 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
G EXOSC4 exosome component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,574,359...37,576,331
Ensembl chr13:37,574,527...37,577,380
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:27,304,257...27,315,389
Ensembl chr16:27,304,198...27,315,233
JBrowse link
G MTPAP mitochondrial poly(A) polymerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:16,666,742...16,695,753
Ensembl chr 2:16,666,749...16,695,709
JBrowse link
G TENT2 terminal nucleotidyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:27,273,188...27,335,897
Ensembl chr 3:27,274,519...27,335,783
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 2:65,068,088...65,147,853
Ensembl chr 2:65,071,111...65,147,896
JBrowse link
G TUT1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr18:54,048,519...54,061,431
Ensembl chr18:54,048,563...54,061,415
JBrowse link
G TUT4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr15:8,832,208...8,958,136
Ensembl chr15:8,832,199...9,047,152
JBrowse link
G TUT7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 1:73,400,648...73,464,935
Ensembl chr 1:73,401,421...73,475,493
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,031,633...38,131,413
Ensembl chr23:38,032,841...38,131,293
JBrowse link
hypoxanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XDH xanthine dehydrogenase involved_in ISO
IEA
RGD
Ensembl
PMID:232638 GO_REF:0000107 RGD:13210503 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:28,498,730...28,500,998
Ensembl chr23:28,498,652...28,499,998
JBrowse link
G NUDT9 nudix hydrolase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2158549|PMID:11825615) Ensembl
MGI
PMID:11825615 GO_REF:0000107 MGI:2158549 NCBI chr32:10,862,532...10,887,162
Ensembl chr32:10,862,527...10,886,863
JBrowse link
IMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr15:3,209,771...3,230,104
Ensembl chr15:3,209,869...3,222,983
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:21873433) MGI PMID:21873433 NCBI chr28:15,525,581...15,621,287
Ensembl chr28:15,526,790...15,621,235
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr15:17,808,454...17,815,987
Ensembl chr15:17,808,461...17,815,676
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16964310) Ensembl
MGI
PMID:16964310 GO_REF:0000107 NCBI chr15:17,808,454...17,815,987
Ensembl chr15:17,808,461...17,815,676
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase acts_upstream_of_or_within ISO (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chr24:18,070,980...18,081,815
Ensembl chr24:18,064,983...18,082,163
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:60,153,616...60,239,254
Ensembl chr 5:60,153,616...60,239,239
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLYCD malonyl-CoA decarboxylase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:68,385,058...68,399,965
Ensembl chr 5:68,384,618...68,399,965
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:60,153,616...60,239,254
Ensembl chr 5:60,153,616...60,239,239
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr25:43,754,382...44,099,497
Ensembl chr25:43,754,484...44,095,381
JBrowse link
G LIN28A lin-28 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:73,638,438...73,656,841
Ensembl chr 2:73,614,531...73,628,211
JBrowse link
G LIN28B lin-28 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:62,403,831...62,529,435
Ensembl chr12:62,403,333...62,524,838
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:28,629,137...28,783,671
Ensembl chr 6:28,629,174...28,783,901
JBrowse link
G SND1 staphylococcal nuclease and tudor domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:8,265,051...8,685,864
Ensembl chr14:8,265,358...8,731,453
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:25049417) UniProt PMID:25049417 NCBI chr 2:65,068,088...65,147,853
Ensembl chr 2:65,071,111...65,147,896
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chr15:8,832,208...8,958,136
Ensembl chr15:8,832,199...9,047,152
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,884,819...32,890,995
Ensembl chr20:32,886,972...32,890,890
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:56,478,771...56,520,992
Ensembl chr10:56,478,680...56,520,967
JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:20,313,902...20,342,375
Ensembl chr 4:20,313,814...20,340,882
JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:20,313,902...20,342,375
Ensembl chr 4:20,313,814...20,340,882
JBrowse link
mitochondrial ncRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:20,313,902...20,342,375
Ensembl chr 4:20,313,814...20,340,882
JBrowse link
mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:18501193) UniProt PMID:18501193 NCBI chr10:56,478,771...56,520,992
Ensembl chr10:56,478,680...56,520,967
JBrowse link
mitochondrial RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chr 4:20,313,902...20,342,375
Ensembl chr 4:20,313,814...20,340,882
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO3 argonaute RISC catalytic component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:6,133,303...6,253,032
Ensembl chr15:6,145,895...6,253,085
JBrowse link
G AGO4 argonaute RISC component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:6,325,899...6,351,748
Ensembl chr15:6,329,413...6,356,676
JBrowse link
G CNOT10 CCR4-NOT transcription complex subunit 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:3,984,505...4,058,649
Ensembl chr23:3,984,505...4,058,384
JBrowse link
G CNOT9 CCR4-NOT transcription complex subunit 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr37:25,186,928...25,213,255
Ensembl chr37:25,187,066...25,212,642
JBrowse link
G DCP2 decapping mRNA 2 involved_in ISO (PMID:21070968), (PMID:28002401)
(MGI:4849882|PMID:21070968)
UniProt PMID:21070968 PMID:28002401 MGI:4849882 NCBI chr 4:35,256,772...35,298,974
Ensembl chr 4:35,256,970...35,299,021
JBrowse link
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:43,754,382...44,099,497
Ensembl chr25:43,754,484...44,095,381
JBrowse link
G DXO decapping exoribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,424,584...1,426,275
Ensembl chr12:1,424,591...1,426,452
JBrowse link
G HSP70 heat shock protein 70 involved_in ISO (PMID:10205060) UniProt PMID:10205060 NCBI chr12:1,285,282...1,287,670 JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5439239|PMID:22844247) Ensembl
MGI
PMID:22844247 GO_REF:0000107 MGI:5439239 NCBI chr20:53,746,656...53,755,388
Ensembl chr20:53,745,742...53,756,870
JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr12:1,270,328...1,279,269 JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr14:44,857,882...44,860,929
Ensembl chr14:44,857,930...44,860,821
JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr15:44,651,830...44,666,418
Ensembl chr15:44,651,830...44,666,418
JBrowse link
G METTL14 methyltransferase like 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:37,653,163...37,679,577
Ensembl chr32:37,653,035...37,678,398
JBrowse link
G METTL16 methyltransferase like 16 involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr 9:46,491,503...46,566,752
Ensembl chr 9:46,496,963...46,558,313
JBrowse link
G METTL3 methyltransferase like 3 involved_in ISO (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr15:18,528,755...18,546,303
Ensembl chr15:18,528,772...18,546,531
JBrowse link
G MIRLET7A-1 microRNA let-7a-1 acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr10:20,034,319...20,034,387
Ensembl chr10:20,034,319...20,034,387
JBrowse link
G MIRLET7C microRNA let-7c acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr31:13,259,522...13,259,588
Ensembl chr31:13,259,502...13,259,609
JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,716,634...109,717,701
Ensembl chr 1:109,716,699...109,717,115
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISO (MGI:6368680|PMID:31101919) UniProt PMID:31101919 MGI:6368680 NCBI chr 3:7,693,903...7,708,930
Ensembl chr 3:7,696,505...7,724,769
JBrowse link
G NUDT16 nudix hydrolase 16 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:28,498,730...28,500,998
Ensembl chr23:28,498,652...28,499,998
JBrowse link
G NUDT16L1 nudix hydrolase 16 like 1 NOT|involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:36,711,351...36,713,931
Ensembl chr 6:36,711,671...36,713,896
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:28,629,137...28,783,671
Ensembl chr 6:28,629,174...28,783,901
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:12721301), (PMID:16055741) UniProt PMID:12721301 PMID:16055741 NCBI chr10:56,478,771...56,520,992
Ensembl chr10:56,478,680...56,520,967
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in ISO (PMID:30930054) UniProt PMID:30930054 NCBI chr13:348,744...361,063
Ensembl chr13:348,860...361,522
JBrowse link
G SLFN14 schlafen family member 14 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:38,091,939...38,112,042
Ensembl chr 9:38,100,691...38,110,695
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:71,760,232...71,791,420
Ensembl chr 2:71,760,312...71,792,527
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5567042|PMID:24415781)
GO_Central
MGI
PMID:21873635 PMID:24415781 MGI:5567042 NCBI chr 1:40,249,856...40,279,344
Ensembl chr 1:40,259,705...40,279,888
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:10330172), (PMID:20221403)
(PMID:10751406), (PMID:11782475)
UniProt
MGI
PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 NCBI chr 1:113,815,972...113,818,093
Ensembl chr 1:113,816,273...113,818,065
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5320815|PMID:22367205) UniProt PMID:22367205 MGI:5320815 NCBI chr10:45,746,952...45,751,268
Ensembl chr10:45,748,936...45,751,250
JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:49288|PMID:1370712) Ensembl
MGI
PMID:1370712 GO_REF:0000107 MGI:49288 NCBI chr13:21,231,985...21,393,756
Ensembl chr13:21,377,316...21,379,832
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr18:42,105,316...42,199,017
Ensembl chr18:42,105,324...42,179,161
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr32:2,192,800...2,305,526
Ensembl chr32:2,145,813...2,306,229
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:61,699,864...62,080,199
Ensembl chr 2:61,652,236...62,080,059
JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:44,317,540...44,453,761
Ensembl chr25:44,317,517...44,452,064
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 2:76,073,553...76,108,763
Ensembl chr 2:76,077,022...76,105,433
JBrowse link
G METTL14 methyltransferase like 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:37,653,163...37,679,577
Ensembl chr32:37,653,035...37,678,398
JBrowse link
G METTL16 methyltransferase like 16 involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr 9:46,491,503...46,566,752
Ensembl chr 9:46,496,963...46,558,313
JBrowse link
G METTL3 methyltransferase like 3 involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 PMID:28965759 MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr15:18,528,755...18,546,303
Ensembl chr15:18,528,772...18,546,531
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,907,655...70,044,055
Ensembl chr 2:69,907,735...70,042,680
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr35:16,255,076...16,294,967 JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in ISO (PMID:30930054) UniProt PMID:30930054 NCBI chr13:348,744...361,063
Ensembl chr13:348,860...361,522
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr 7:66,862,614...67,001,538
Ensembl chr 7:66,862,608...67,142,853
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:46,927,218...46,940,015
Ensembl chr24:46,927,848...46,951,949
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:71,760,232...71,791,420
Ensembl chr 2:71,760,312...71,792,527
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:13,239,900...13,280,035
Ensembl chr29:13,239,966...13,277,051
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3057047|PMID:15480992) Ensembl
MGI
PMID:15480992 GO_REF:0000107 MGI:3057047 NCBI chr27:37,102,728...37,114,084
Ensembl chr27:37,103,016...37,114,556
JBrowse link
G AXIN2 axin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:14,559,476...14,588,950
Ensembl chr 9:14,559,388...14,588,530
JBrowse link
G CIRBP cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538 NCBI chr20:57,521,609...57,526,526
Ensembl chr20:57,519,119...57,526,435
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:35,825,154...35,827,913
Ensembl chr 2:35,825,636...35,827,840
JBrowse link
G E2F1 E2F transcription factor 1 involved_in ISO (PMID:15766563) BHF-UCL PMID:15766563 NCBI chr24:22,895,149...22,904,689
Ensembl chr24:22,878,402...22,904,656
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:24,355,326...24,403,306
Ensembl chr26:24,355,826...24,402,827
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19029303)
(PMID:21613615)
(PMID:31358969)
(MGI:5559905|PMID:24394384)
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615)
(MGI:5922838|PMID:27609837)
UniProt
MGI
CACAO
PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 PMID:31358969 MGI:3037407 MGI:5287957 MGI:5559905 MGI:5922838 NCBI chr20:52,648,878...52,677,578 JBrowse link
G FUS FUS RNA binding protein acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chr 6:17,059,904...17,071,227
Ensembl chr 6:17,060,061...17,071,178
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:15192077 RGD:1357938 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) UniProt PMID:17174306 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754
JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,747,303...2,772,574
Ensembl chr38:2,747,297...2,772,587
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) UniProt PMID:25940091 PMID:28673543 NCBI chr 4:54,991,528...55,045,976
Ensembl chr 4:54,994,227...55,017,098
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO (MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:2158083 NCBI chr 7:5,873,088...5,903,484
Ensembl chr 7:5,814,201...5,902,220
JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 9:18,795,289...18,814,677
Ensembl chr 9:18,796,799...18,814,682
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,587,769...3,612,184
Ensembl chr19:3,588,695...3,609,307
JBrowse link
G QKI QKI, KH domain containing RNA binding ISO RGD PMID:16855020 RGD:10045995 NCBI chr 1:51,800,294...51,956,891
Ensembl chr 1:51,800,309...51,952,714
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr35:16,255,076...16,294,967 JBrowse link
G RBM46 RNA binding motif protein 46 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644240|PMID:25397698) Ensembl
MGI
PMID:25397698 GO_REF:0000107 MGI:5644240 NCBI chr15:52,427,852...52,478,953
Ensembl chr15:52,441,960...52,477,453
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:85148|PMID:9009318) Ensembl
MGI
PMID:9009318 GO_REF:0000107 MGI:85148 NCBI chr37:25,039,203...25,047,461
Ensembl chr37:25,038,360...25,047,282
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:32,692,517...32,696,325
Ensembl chr 9:32,694,073...32,696,285
JBrowse link
G TAF15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chr 9:37,842,772...37,873,302
Ensembl chr 9:37,842,772...37,873,094
JBrowse link
G TENT5A terminal nucleotidyltransferase 5A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:42,270,029...42,277,905
Ensembl chr12:42,274,000...42,277,513
JBrowse link
G TENT5B terminal nucleotidyltransferase 5B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:73,156,894...73,165,745
Ensembl chr 2:73,131,861...73,164,506
JBrowse link
G TENT5C terminal nucleotidyltransferase 5C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:54,951,507...54,969,131
Ensembl chr17:54,967,089...54,968,399
JBrowse link
G TENT5D terminal nucleotidyltransferase 5D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:61,832,733...61,855,517
Ensembl chr  X:61,852,894...61,854,066
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:5,955,469...6,022,442
Ensembl chr15:5,956,316...6,021,875
JBrowse link
G TRAF2 TNF receptor associated factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,688,071...48,713,936
Ensembl chr 9:48,689,331...48,703,633
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:68,029,861...68,070,901
Ensembl chr12:68,030,197...68,058,518
JBrowse link
G TRAF5 TNF receptor associated factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:9,812,019...9,831,955
Ensembl chr 7:9,812,132...9,831,955
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:42,941,655...42,950,160
Ensembl chr 1:42,941,224...42,950,700
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:31358969) UniProt PMID:31358969 NCBI chr15:646,301...666,347
Ensembl chr15:646,584...666,329
JBrowse link
G YBX2 Y-box binding protein 2 acts_upstream_of_or_within ISO (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chr 5:32,244,536...32,250,130
Ensembl chr 5:32,245,056...32,251,985
JBrowse link
NAD catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:12790796)
GO_Central
MGI
PMID:12790796 PMID:21873635 NCBI chr 3:7,693,903...7,708,930
Ensembl chr 3:7,696,505...7,724,769
JBrowse link
G NUDT17 nudix hydrolase 17 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:58,648,234...58,653,222
Ensembl chr17:58,648,272...58,650,757
JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,620,878...42,639,662
Ensembl chr 9:42,622,538...42,639,590
JBrowse link
G TIGD7 tigger transposable element derived 7 involved_in ISO (MGI:5426136|PMID:11011142) UniProt PMID:11011142 MGI:5426136 NCBI chr 6:37,931,461...37,937,102
Ensembl chr 6:37,934,889...37,936,535
JBrowse link
NADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:12790796)
GO_Central
MGI
PMID:12790796 PMID:21873635 NCBI chr 3:7,693,903...7,708,930
Ensembl chr 3:7,696,505...7,724,769
JBrowse link
G NUDT13 nudix hydrolase 13 involved_in ISO (MGI:6368098|PMID:28755312) UniProt PMID:28755312 MGI:6368098 NCBI chr 4:23,695,183...23,712,301
Ensembl chr 4:23,695,266...23,711,937
JBrowse link
G NUDT17 nudix hydrolase 17 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:58,648,234...58,653,222
Ensembl chr17:58,648,272...58,650,757
JBrowse link
ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr 2:65,068,088...65,147,853
Ensembl chr 2:65,071,111...65,147,896
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase like 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,491,503...46,566,752
Ensembl chr 9:46,496,963...46,558,313
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15572351)
(MGI:2182584|PMID:10601318), (MGI:3029597|PMID:14663139)
Ensembl
MGI
PMID:10601318 PMID:14663139 PMID:15572351 GO_REF:0000107 MGI:2182584 MGI:3029597 NCBI chr 2:85,364,819...85,372,473
Ensembl chr 2:85,364,851...85,373,772
JBrowse link
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:27184051 RGD:13781945 NCBI chr 5:63,122,379...63,152,078
Ensembl chr 5:63,122,498...63,151,661
JBrowse link
G PAM16 presequence translocase associated motor 16 ISO RGD PMID:24069394 RGD:13462066 NCBI chr 6:37,040,484...37,047,708 JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:24,355,326...24,403,306
Ensembl chr26:24,355,826...24,402,827
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RGN regucalcin ISO RGD PMID:2001740 RGD:9590215 NCBI chr  X:40,697,292...40,715,491
Ensembl chr  X:40,698,768...40,715,490
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT2 terminal nucleotidyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:27,273,188...27,335,897
Ensembl chr 3:27,274,519...27,335,783
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRPPRC leucine rich pentatricopeptide repeat containing involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5438202|PMID:22045337)
(MGI:5301479|PMID:21880015)
Ensembl
MGI
PMID:21880015 PMID:22045337 GO_REF:0000107 MGI:5301479 MGI:5438202 NCBI chr10:46,325,312...46,438,376
Ensembl chr10:46,327,223...46,438,342
JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:5438202|PMID:22045337)
GO_Central
MGI
Ensembl
PMID:21873635 PMID:22045337 GO_REF:0000107 MGI:5438202 NCBI chr 8:50,471,175...50,478,923
Ensembl chr 8:50,471,228...50,481,268
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 FMRP translational regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439
JBrowse link
G PKP1 plakophilin 1 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chr 7:1,921,143...1,966,910
Ensembl chr 7:1,921,143...1,967,703
JBrowse link
G PKP3 plakophilin 3 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chr18:25,540,073...25,547,667
Ensembl chr18:25,540,073...25,547,667
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX34 DExH-box helicase 34 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,610,896...108,634,594
Ensembl chr 1:108,521,685...108,634,105
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,091,536...11,410,284
Ensembl chr17:11,091,543...11,430,839
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:18447585) UniProt PMID:18447585 NCBI chr13:2,563,698...2,580,610
Ensembl chr13:2,564,065...2,580,368
JBrowse link
G SECISBP2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5582859|PMID:24274065) Ensembl
MGI
PMID:24274065 GO_REF:0000107 MGI:5582859 NCBI chr 1:96,879,840...96,927,583
Ensembl chr 1:96,880,369...96,933,862
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4A terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr34:7,021,743...7,063,049
Ensembl chr34:7,020,187...7,063,129
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr 2:65,068,088...65,147,853
Ensembl chr 2:65,071,111...65,147,896
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:26,736,805...26,741,119
Ensembl chr 9:26,736,675...26,740,177
JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:61,285,998...61,332,518
Ensembl chr 8:61,286,950...61,332,431
JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTAP methylthioadenosine phosphorylase NOT|involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chr11:41,148,389...41,200,635
Ensembl chr11:41,148,404...41,264,504
JBrowse link
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:17,808,454...17,815,987
Ensembl chr15:17,808,461...17,815,676
JBrowse link
nuclear histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SSB small RNA binding exonuclease protection factor La involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:14,465,088...14,476,786
Ensembl chr36:14,465,129...14,476,609
JBrowse link
nuclear mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DXO decapping exoribonuclease involved_in ISO (MGI:5488528|PMID:23523372) UniProt PMID:23523372 MGI:5488528 NCBI chr12:1,424,584...1,426,275
Ensembl chr12:1,424,591...1,426,452
JBrowse link
G EXOSC10 exosome component 10 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
G EXOSC4 exosome component 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:37,574,359...37,576,331
Ensembl chr13:37,574,527...37,577,380
JBrowse link
G EXOSC5 exosome component 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:112,599,519...112,609,039
Ensembl chr 1:112,599,568...112,608,941
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:43,343,573...43,379,614
Ensembl chr20:43,343,573...43,379,574
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:3,698,399...3,708,342
Ensembl chr25:3,698,483...3,769,683
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:18,324,117...18,336,628
Ensembl chr19:18,324,119...18,336,602
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,031,633...38,131,413
Ensembl chr23:38,032,841...38,131,293
JBrowse link
nuclear polyadenylation-dependent antisense transcript catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
nuclear polyadenylation-dependent CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:43,343,573...43,379,614
Ensembl chr20:43,343,573...43,379,574
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:3,698,399...3,708,342
Ensembl chr25:3,698,483...3,769,683
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:18,324,117...18,336,628
Ensembl chr19:18,324,119...18,336,602
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,478,771...56,520,992
Ensembl chr10:56,478,680...56,520,967
JBrowse link
nuclear polyadenylation-dependent rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:53,266,396...53,276,236
Ensembl chr 9:53,266,401...53,276,677
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:43,343,573...43,379,614
Ensembl chr20:43,343,573...43,379,574
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:3,698,399...3,708,342
Ensembl chr25:3,698,483...3,769,683
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:18,324,117...18,336,628
Ensembl chr19:18,324,119...18,336,602
JBrowse link
nuclear polyadenylation-dependent snoRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
nuclear polyadenylation-dependent snRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
nuclear polyadenylation-dependent tRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:53,266,396...53,276,236
Ensembl chr 9:53,266,401...53,276,677
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:43,343,573...43,379,614
Ensembl chr20:43,343,573...43,379,574
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:3,698,399...3,708,342
Ensembl chr25:3,698,483...3,769,683
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:18,324,117...18,336,628
Ensembl chr19:18,324,119...18,336,602
JBrowse link
nuclear retention of pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCID2 PCI domain containing 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:60,602,440...60,623,811
Ensembl chr22:60,602,888...60,623,719
JBrowse link
nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:53,266,396...53,276,236
Ensembl chr 9:53,266,401...53,276,677
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
JBrowse link
nuclear retention of unspliced pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
G PRPF18 pre-mRNA processing factor 18 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:22,868,184...22,922,647 JBrowse link
nuclear-transcribed mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:6,258,359...6,294,911
Ensembl chr15:6,263,882...6,295,338
JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:12,300,706...12,307,931
Ensembl chr 9:12,300,708...12,307,663
JBrowse link
G DHX34 DExH-box helicase 34 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,610,896...108,634,594
Ensembl chr 1:108,521,685...108,634,105
JBrowse link
G EXOSC10 exosome component 10 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130
JBrowse link
G EXOSC4 exosome component 4 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr13:37,574,359...37,576,331
Ensembl chr13:37,574,527...37,577,380
JBrowse link
G EXOSC9 exosome component 9 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr19:18,324,117...18,336,628
Ensembl chr19:18,324,119...18,336,602
JBrowse link
G LOC102154080 U6 snRNA-associated Sm-like protein LSm3 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:14,519,325...14,519,728 JBrowse link
G LOC111097709 negative regulator of P-body association-like involved_in ISO (PMID:27918561) UniProt PMID:27918561 NCBI chr10:42,940,279...42,940,944 JBrowse link
G LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA InterPro GO_REF:0000002 NCBI chr20:4,328,930...4,342,731
Ensembl chr20:4,329,038...4,342,859
JBrowse link
G LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA UniProt GO_REF:0000104 NCBI chr20:44,707,460...44,720,490
Ensembl chr20:44,707,460...44,720,490
JBrowse link
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA InterPro GO_REF:0000002 NCBI chr20:56,730,476...56,735,115
Ensembl chr20:56,730,486...56,735,112
JBrowse link
G MRTO4 MRT4 homolog, ribosome maturation factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:79,360,897...79,367,038
Ensembl chr 2:79,360,970...79,366,935
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,091,536...11,410,284
Ensembl chr17:11,091,543...11,430,839
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:15039777 RGD:10045958 NCBI chr20:57,806,450...57,818,435
Ensembl chr20:57,807,826...57,818,359
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:25026078)
(MGI:4819285|PMID:20639877)
UniProt
BHF-UCL
PMID:20639877 PMID:25026078 MGI:4819285 NCBI chr 7:25,265,836...25,312,417
Ensembl chr 7:25,233,235...25,305,174
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:5,955,469...6,022,442
Ensembl chr15:5,956,316...6,021,875
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr23:38,031,633...38,131,413
Ensembl chr23:38,032,841...38,131,293
JBrowse link
G XRN2 5'-3' exoribonuclease 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:2,042,521...2,128,942
Ensembl chr24:2,042,888...2,128,867
JBrowse link
nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SKIV2L Ski2 like RNA helicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:1,412,407...1,424,521
Ensembl chr12:1,412,540...1,424,526
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:58,038,456...58,138,364
Ensembl chr 2:58,038,483...58,137,622
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr32:2,192,800...2,305,526
Ensembl chr32:2,145,813...2,306,229
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:32,884,819...32,890,995
Ensembl chr20:32,886,972...32,890,890
JBrowse link
G POLR2D RNA polymerase II subunit D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:22,754,118...22,774,054
Ensembl chr19:22,754,141...22,774,231
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:25,265,836...25,312,417
Ensembl chr 7:25,233,235...25,305,174
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:59,881,889...59,943,271
Ensembl chr 9:59,881,966...59,929,341
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:23644599)
(MGI:3589099|PMID:15814898)
UniProt
MGI
PMID:15814898 PMID:23644599 MGI:3589099 NCBI chr 1:113,815,972...113,818,093
Ensembl chr 1:113,816,273...113,818,065
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3589099|PMID:15814898) Ensembl
MGI
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr 8:42,663,287...42,668,665
Ensembl chr 8:42,664,223...42,668,514
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 acts_upstream_of_or_within ISO (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chr10:45,746,952...45,751,268
Ensembl chr10:45,748,936...45,751,250
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,815,972...113,818,093
Ensembl chr 1:113,816,273...113,818,065
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in ISO PMID:11279239 UniProt PMID:11279239 RGD:11344953 NCBI chr 8:42,663,287...42,668,665
Ensembl chr 8:42,664,223...42,668,514
JBrowse link
nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr15:4,972,369...4,984,218
Ensembl chr15:4,972,956...4,980,371
JBrowse link
nuclear-transcribed mRNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in ISO (PMID:23756462) UniProt PMID:23756462 NCBI chr25:43,754,382...44,099,497
Ensembl chr25:43,754,484...44,095,381
JBrowse link
G POLR2G RNA polymerase II subunit G involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:53,916,431...53,919,724
Ensembl chr18:53,916,435...53,919,549
JBrowse link
nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr25:43,754,382...44,099,497
Ensembl chr25:43,754,484...44,095,381
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:53,266,396...53,276,236
Ensembl chr 9:53,266,401...53,276,677
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:54,072,993...54,079,024
Ensembl chr11:54,073,313...54,078,598
JBrowse link
G EXOSC4 exosome component 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:37,574,359...37,576,331
Ensembl chr13:37,574,527...37,577,380
JBrowse link
G EXOSC5 exosome component 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:112,599,519...112,609,039
Ensembl chr 1:112,599,568...112,608,941
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:43,343,573...43,379,614
Ensembl chr20:43,343,573...43,379,574
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:3,698,399...3,708,342
Ensembl chr25:3,698,483...3,769,683
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:18,324,117...18,336,628
Ensembl chr19:18,324,119...18,336,602
JBrowse link
G TTC37 tetratricopeptide repeat domain 37 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:14,027,735...14,108,224
Ensembl chr 3:14,034,925...14,103,888
JBrowse link
nuclear-transcribed mRNA catabolic process, no-go decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:1,209,732...1,277,435
Ensembl chr11:1,212,546...1,270,997
JBrowse link
G CSDE1 cold shock domain containing E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:52,418,978...52,458,427
Ensembl chr17:52,420,048...52,458,329
JBrowse link
G GTPBP2 GTP binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5574482|PMID:25061210) Ensembl
MGI
PMID:25061210 GO_REF:0000107 MGI:5574482 NCBI chr12:12,073,233...12,082,630
Ensembl chr12:12,074,264...12,080,937
JBrowse link
G ITGA1 integrin subunit alpha 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:62,287,823...62,455,940
Ensembl chr 4:62,293,082...62,455,650
JBrowse link
nuclear-transcribed mRNA catabolic process, non-stop decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGA1 integrin subunit alpha 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:62,287,823...62,455,940
Ensembl chr 4:62,293,082...62,455,650
JBrowse link
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL6IP1 ADP ribosylation factor like GTPase 6 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:26,308,951...26,317,369
Ensembl chr 6:26,224,900...26,315,908
JBrowse link
G CACNA2D4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr27:43,840,190...43,961,067
Ensembl chr27:43,844,529...44,041,637
JBrowse link
G CASC3 CASC3 exon junction complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:22,403,139...22,427,475
Ensembl chr 9:22,405,336...22,427,426
JBrowse link
G CTIF cap binding complex dependent translation initiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:79,780,645...79,998,207
Ensembl chr 7:79,593,622...79,988,409
JBrowse link
G DCP1A decapping mRNA 1A involved_in IEA UniProt GO_REF:0000043 NCBI chr20:36,597,457...36,661,362
Ensembl chr20:36,597,178...36,657,756
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA UniProt GO_REF:0000043 NCBI chr27:43,987,778...44,041,661
Ensembl chr27:43,844,529...44,041,637
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:35,256,772...35,298,974
Ensembl chr 4:35,256,970...35,299,021
JBrowse link
G DHX34 DExH-box helicase 34 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:108,610,896...108,634,594
Ensembl chr 1:108,521,685...108,634,105
JBrowse link
G EIF3E eukaryotic translation initiation factor 3 subunit E involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:8,834,724...8,887,818
Ensembl chr13:8,834,821...8,887,760
JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,582,950...1,593,893
Ensembl chr 9:1,582,993...1,593,892
JBrowse link
G ETF1 eukaryotic translation termination factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:26,078,611...26,110,805
Ensembl chr11:26,080,478...26,110,894
JBrowse link
G HELZ2 helicase with zinc finger 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:47,147,346...47,161,452
Ensembl chr24:47,148,444...47,161,570
JBrowse link
G LOC100684639 proline-rich nuclear receptor coactivator 2-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:3,585,510...3,587,147 JBrowse link
G MAGOH mago homolog, exon junction complex subunit involved_in ISO (PMID:23917022)
(PMID:16209946)
HGNC
UniProt
PMID:16209946 PMID:23917022 NCBI chr 5:55,688,443...55,699,741 JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit involved_in ISO (PMID:23917022) HGNC PMID:23917022 NCBI chr27:35,125,786...35,133,372 JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:54,938,250...54,974,536
Ensembl chr11:54,938,372...54,974,547
JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:29,911,457...29,943,596
Ensembl chr33:29,912,569...29,962,175
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:28,629,137...28,783,671
Ensembl chr 6:28,629,174...28,783,901
JBrowse link
G PNLDC1 PARN like ribonuclease domain containing exonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:49,045,153...49,063,008
Ensembl chr 1:49,044,979...49,062,802
JBrowse link
G PNRC2 proline rich nuclear receptor coactivator 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:75,602,514...75,606,420 JBrowse link
G PYM1 PYM homolog 1, exon junction complex associated factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:251,493...266,996
Ensembl chr10:251,657...266,538
JBrowse link
G RBM8A RNA binding motif protein 8A involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,722,449...58,726,017
Ensembl chr17:58,724,227...58,725,969
JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,719,713...38,729,437
Ensembl chr 6:38,719,792...38,728,773
JBrowse link
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chr 6:26,224,837...26,306,394
Ensembl chr 6:26,224,900...26,315,908
JBrowse link
G SMG5 SMG5 nonsense mediated mRNA decay factor involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000043 NCBI chr 7:41,598,111...41,624,575
Ensembl chr 7:41,598,104...41,624,575
JBrowse link
G SMG6 SMG6 nonsense mediated mRNA decay factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:46,162,991...46,405,856
Ensembl chr 9:46,164,492...46,405,748
JBrowse link
G SMG7 SMG7 nonsense mediated mRNA decay factor involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000043 NCBI chr 7:16,820,938...16,913,359
Ensembl chr 7:16,820,882...16,911,377
JBrowse link
G SMG8 SMG8 nonsense mediated mRNA decay factor involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr 9:33,759,020...33,763,767
Ensembl chr 9:33,759,132...33,935,412
JBrowse link
G SMG9 SMG9 nonsense mediated mRNA decay factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:111,416,396...111,438,069
Ensembl chr 1:111,416,624...111,435,575
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916
JBrowse link
G UPF2 UPF2 regulator of nonsense mediated mRNA decay involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:24,370,961...24,473,437
Ensembl chr 2:24,371,058...24,472,140
JBrowse link
G UPF3A UPF3A regulator of nonsense mediated mRNA decay involved_in
NOT|involved_in
IEA
ISO
(PMID:16601204) UniProt
UniProt
PMID:16601204 GO_REF:0000043 NCBI chr22:61,320,575...61,373,082
Ensembl chr22:61,320,451...61,345,839
JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000043 NCBI chr  X:91,835,845...91,851,755
Ensembl chr  X:91,836,727...91,851,640
JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT2 CCR4-NOT transcription complex subunit 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:12,057,269...12,174,405
Ensembl chr10:12,009,762...12,172,427
JBrowse link
G CNOT3 CCR4-NOT transcription complex subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:103,057,392...103,070,612
Ensembl chr 1:103,057,542...103,066,887
JBrowse link
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:1,209,732...1,277,435
Ensembl chr11:1,212,546...1,270,997
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr32:2,192,800...2,305,526
Ensembl chr32:2,145,813...2,306,229
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr16:40,554,214...40,571,841
Ensembl chr16:40,555,565...40,571,720
JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1934053|PMID:11337385) Ensembl
MGI
PMID:11337385 GO_REF:0000107 MGI:1934053 NCBI chr23:6,889,108...6,938,117
Ensembl chr23:6,889,135...6,938,116
JBrowse link
G PAN2 poly(A) specific ribonuclease subunit PAN2 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr10:621,286...636,899
Ensembl chr10:621,281...634,495
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr25:11,416,321...11,550,830
Ensembl chr25:11,417,657...11,550,810
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3785219|PMID:18337750)
GO_Central
MGI
PMID:18337750 PMID:21873635 MGI:3785219 NCBI chr 6:28,629,137...28,783,671
Ensembl chr 6:28,629,174...28,783,901
JBrowse link
G PNLDC1 PARN like ribonuclease domain containing exonuclease 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:49,045,153...49,063,008
Ensembl chr 1:49,044,979...49,062,802
JBrowse link
G SAMD4A sterile alpha motif domain containing 4A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:30,476,425...30,687,240
Ensembl chr 8:30,476,418...30,687,240
JBrowse link
G SAMD4B sterile alpha motif domain containing 4B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:113,828,432...113,857,336
Ensembl chr 1:113,828,447...113,857,314
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3589099|PMID:15814898) Ensembl
MGI
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr 1:113,815,972...113,818,093
Ensembl chr 1:113,816,273...113,818,065
JBrowse link
nucleobase-containing small molecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chr25:34,032,104...34,067,772
Ensembl chr25:34,032,055...34,063,281
JBrowse link
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,565,173...12,601,152
Ensembl chr28:12,564,727...12,600,240
JBrowse link
nucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:9,181,851...9,311,835
Ensembl chr28:9,211,050...9,323,939
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:48,589,408...48,594,852
Ensembl chr 9:48,570,891...48,594,452
JBrowse link
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3043501|PMID:15130768)
GO_Central
MGI
PMID:15130768 PMID:21873635 MGI:3043501 NCBI chr23:9,858,328...9,891,244
Ensembl chr23:9,858,764...9,890,483
JBrowse link
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:34,032,104...34,067,772
Ensembl chr25:34,032,055...34,063,281
JBrowse link
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:47,193,463...47,245,865
Ensembl chr 8:47,196,439...47,229,964
JBrowse link
G ENTPD6 ectonucleoside triphosphate diphosphohydrolase 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:1,374,793...1,422,625
Ensembl chr23:1,374,199...1,420,802
JBrowse link
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:12,565,173...12,601,152
Ensembl chr28:12,564,727...12,600,240
JBrowse link
G ENTPD8 ectonucleoside triphosphate diphosphohydrolase 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:48,301,499...48,306,210
Ensembl chr 9:48,303,206...48,305,992
JBrowse link
nucleoside phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in ISO (PMID:26878724)
(PMID:26238318)
UniProt PMID:26238318 PMID:26878724 NCBI chr22:3,416,702...3,424,607
Ensembl chr22:3,416,578...3,424,409
JBrowse link
nucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in ISO (PMID:24467396)
(MGI:3844778|PMID:19220460)
UniProt PMID:19220460 PMID:24467396 MGI:3844778 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718
JBrowse link
G ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:97,426...195,939
Ensembl chr12:97,483...182,082
JBrowse link
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3043501|PMID:15130768) Ensembl
MGI
PMID:15130768 GO_REF:0000107 MGI:3043501 NCBI chr23:9,858,328...9,891,244
Ensembl chr23:9,858,764...9,890,483
JBrowse link
G ITPA inosine triphosphatase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:18,070,980...18,081,815
Ensembl chr24:18,064,983...18,082,163
JBrowse link
G SMPDL3A sphingomyelin phosphodiesterase acid like 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:62,091,947...62,110,081
Ensembl chr 1:62,092,121...62,109,773
JBrowse link
nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:108,215...120,213 JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr25:43,754,382...44,099,497
Ensembl chr25:43,754,484...44,095,381
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:8,832,208...8,958,136
Ensembl chr15:8,832,199...9,047,152
JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chr 1:73,400,648...73,464,935
Ensembl chr 1:73,401,421...73,475,493
JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser