Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:response to cadmium ion
go back to main search page
Accession:GO:0046686 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
Synonyms:exact_synonym: response to cadmium
 related_synonym: cadmium sensitivity/resistance


show annotations for term's descendants           Sort by:
 
response to cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:17136310 RGD:1598557 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Alad aminolevulinate dehydratase IDA
IEP
RGD PMID:7896311, PMID:20019094 RGD:1599018, RGD:4144138 NCBI chr 5:78,368,867...78,379,206
Ensembl chr 5:78,368,867...78,379,346
JBrowse link
G Arg1 arginase 1 IEP RGD PMID:16570515 RGD:4143188 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Arg2 arginase 2 IEP RGD PMID:16570515 RGD:4143188 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520
JBrowse link
G B2m beta-2 microglobulin IEP RGD PMID:17327699 RGD:2293801 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 IEP RGD PMID:9343363 RGD:2611154 NCBI chr11:72,577,547...72,619,435
Ensembl chr11:72,578,533...72,614,176
JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II beta acts_upstream_of_or_within ISO (MGI:3710042|PMID:17367784) RGD PMID:17367784 MGI:3710042 NCBI chr14:86,208,876...86,297,727
Ensembl chr14:86,208,901...86,297,652
JBrowse link
G Cat catalase IEP RGD PMID:18655190 RGD:9068930 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEP RGD PMID:16730872 RGD:2293566 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Cdk2 cyclin dependent kinase 2 IEP RGD PMID:16730872 RGD:2293566 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B IEP RGD PMID:16730872 RGD:2293566 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
JBrowse link
G Ctnnb1 catenin beta 1 IEP RGD PMID:17136310 RGD:1598557 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cyb5a cytochrome b5 type A IEP RGD PMID:14595535 RGD:1599661 NCBI chr18:81,694,818...81,726,821
Ensembl chr18:81,694,808...81,726,821
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:15223132 RGD:1599710 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893
JBrowse link
G Cyp3a23-3a1 cytochrome P450, family 3, subfamily a, polypeptide 23-polypeptide 1 IEP RGD PMID:14595535 RGD:1599661 NCBI chr12:11,053,888...11,082,742
Ensembl chr12:11,655,402...11,733,136
JBrowse link
G Dtymk deoxythymidylate kinase IEP RGD PMID:223769 RGD:5133685 NCBI chr 9:100,921,565...100,930,399
Ensembl chr 9:100,921,565...100,930,399
JBrowse link
G Ece1 endothelin converting enzyme 1 IEP RGD PMID:12189509 RGD:7244161 NCBI chr 5:156,215,469...156,318,652
Ensembl chr 5:156,215,417...156,318,671
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit IEP RGD PMID:25729986 RGD:13207321 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit IEP RGD PMID:10702364 RGD:10402382 NCBI chr 8:85,059,051...85,097,471
Ensembl chr 8:85,059,051...85,097,468
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 IEP RGD PMID:29101047 RGD:13504825 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial IEP RGD PMID:17066326 RGD:2313663 NCBI chr 1:275,843,823...275,906,880
Ensembl chr 1:275,846,819...275,906,686
JBrowse link
G Gpi glucose-6-phosphate isomerase IEP RGD PMID:10536756 RGD:11051961 NCBI chr 1:90,063,411...90,091,287
Ensembl chr 1:90,063,411...90,091,287
JBrowse link
G Gsr glutathione-disulfide reductase IEP RGD PMID:24758558 RGD:11059510 NCBI chr16:62,197,617...62,239,987
Ensembl chr16:62,197,617...62,241,361
JBrowse link
G Gss glutathione synthetase acts_upstream_of_or_within ISO (MGI:81780|PMID:8660701) RGD PMID:8660701 MGI:81780 NCBI chr 3:151,076,254...151,106,557
Ensembl chr 3:151,076,254...151,106,557
JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in ISO
IEA
(PMID:12007609)
GO_REF:0000107
RGD
Ensembl
PMID:12007609 GO_REF:0000107 NCBI chr 6:7,045,145...7,059,227
Ensembl chr 6:7,045,152...7,058,314
JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 IEP RGD PMID:20957662 RGD:4890460 NCBI chr17:1,579,319...1,610,745
Ensembl chr17:1,579,319...1,610,745
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP RGD PMID:18972398 RGD:4890965
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 IEP RGD PMID:18972398 RGD:4890965 NCBI chr 2:200,712,895...200,722,429
Ensembl chr 2:202,341,422...202,350,929
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IEP RGD PMID:24462979 RGD:12910750 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO MGI:1346862 (MGI:3619752|PMID:16458303) RGD PMID:16458303 MGI:3619752 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 acts_upstream_of_or_within ISO MGI:1346861 (MGI:3619752|PMID:16458303) RGD PMID:16458303 MGI:3619752 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:25388156 RGD:13204797 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Mt-cyb mitochondrially encoded cytochrome b IDA RGD PMID:8269544 RGD:2298966 NCBI chr MT:14,136...15,278
Ensembl chr MT:14,136...15,278
JBrowse link
G Mt1 metallothionein 1 IEP RGD PMID:19938953 RGD:10412649 NCBI chr19:11,301,991...11,303,007
Ensembl chr17:78,793,336...78,793,724
JBrowse link
G Mtf1 metal-regulatory transcription factor 1 acts_upstream_of_or_within ISO MGI:2182939 (MGI:1266982|PMID:9582278) RGD PMID:9582278 MGI:1266982 NCBI chr 5:142,797,340...142,843,896
Ensembl chr 5:142,797,366...142,842,122
Ensembl chr 5:142,797,366...142,842,122
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 IDA RGD PMID:12890491 RGD:632349 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Nudt1 nudix hydrolase 1 IEP RGD PMID:11817101 RGD:633232 NCBI chr12:16,391,578...16,398,771
Ensembl chr12:16,391,578...16,395,029
JBrowse link
G Pcna proliferating cell nuclear antigen IEP RGD PMID:15638412 RGD:2315016 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Prnp prion protein IDA RGD PMID:16148034 RGD:1599958 NCBI chr 3:124,515,917...124,531,320
Ensembl chr 3:124,515,978...124,531,316
JBrowse link
G Pth parathyroid hormone IEP RGD PMID:22708652 RGD:7242891 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Slc11a2 solute carrier family 11 member 2 IEP RGD PMID:19083094 RGD:2311406 NCBI chr 7:142,025,812...142,062,892
Ensembl chr 7:142,025,815...142,063,212
JBrowse link
G Slc34a1 solute carrier family 34 member 1 involved_in ISO (PMID:8898024) RGD PMID:8898024 NCBI chr17:9,747,766...9,762,739
Ensembl chr17:9,747,752...9,762,813
JBrowse link
G Sod2 superoxide dismutase 2 IEP RGD PMID:20107868 RGD:2317377 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Sord sorbitol dehydrogenase IDA RGD PMID:10620479 RGD:1601368 NCBI chr 3:114,176,127...114,207,368
Ensembl chr 3:114,176,309...114,207,366
JBrowse link
G Sparc secreted protein acidic and cysteine rich IEP RGD PMID:9232954 RGD:2300068 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Tert telomerase reverse transcriptase IEP RGD PMID:21181359 RGD:11038678 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
cellular detoxification of cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb6 ATP binding cassette subfamily B member 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:31053883)
UniProt
RGD
PMID:31053883 GO_REF:0000024 NCBI chr 9:82,373,950...82,382,228
Ensembl chr 9:82,373,946...82,382,272
JBrowse link
cellular response to cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC128848.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:11,302,125...11,302,938 JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21787718) RGD PMID:21787718 NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:17584760 RGD:8655656 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr 5:101,003,019...101,006,375
Ensembl chr 5:101,003,023...101,006,375
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 1:263,848,829...263,884,354
Ensembl chr 1:263,848,884...263,885,169
JBrowse link
G Cybb cytochrome b-245 beta chain IEP RGD PMID:21195169 RGD:11040689 NCBI chr  X:14,578,330...14,610,049
Ensembl chr  X:14,578,264...14,612,547
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:17719163 RGD:4835171 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr 8:62,451,360...62,458,244
Ensembl chr 8:62,451,329...62,458,301
JBrowse link
G Cyp2a3 cytochrome P450, family 2, subfamily a, polypeptide 3 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr 1:83,653,248...83,662,118
Ensembl chr 1:83,653,234...83,766,484
JBrowse link
G Daxx death-domain associated protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:15016915)
UniProt
Ensembl
RGD
PMID:15016915 GO_REF:0000024 GO_REF:0000107 NCBI chr20:5,480,103...5,485,962
Ensembl chr20:5,480,103...5,485,926
JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IEP RGD PMID:24361405 RGD:9685430 NCBI chr 7:94,479,931...94,563,086
Ensembl chr 7:94,480,396...94,563,001
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 6:109,300,433...109,303,299
Ensembl chr 6:109,300,433...109,303,299
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Gsn gelsolin IDA RGD PMID:16280379 RGD:1599859 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr16:2,616,538...2,636,708
Ensembl chr16:2,634,603...2,636,708
JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO (MGI:3607883|PMID:16183037) RGD PMID:16183037 MGI:3607883 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:10359787), (PMID:11514557), (PMID:15016915), (PMID:25963659) RGD PMID:10359787 PMID:11514557 PMID:15016915 PMID:25963659 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:9736451 RGD:10059378 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO
IEA
(PMID:26514923)
GO_REF:0000107
RGD
Ensembl
PMID:26514923 GO_REF:0000107 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in IEA
ISO
GO_REF:0000107
(PMID:26514923)
Ensembl
RGD
PMID:26514923 GO_REF:0000107 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in ISO
IEA
(PMID:26514923)
GO_REF:0000107
RGD
Ensembl
PMID:26514923 GO_REF:0000107 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Mt1 metallothionein 1 involved_in IBA
ISO
PMID:21873635
(PMID:16827180)
RGD PMID:16827180, PMID:21873635 RGD:13792537 NCBI chr19:11,301,991...11,303,007
Ensembl chr17:78,793,336...78,793,724
JBrowse link
G Mt1m metallothionein 1M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,677,460...3,677,838
Ensembl chr20:3,677,474...3,677,847
JBrowse link
G Mt2A metallothionein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:11,307,966...11,308,740
Ensembl chr19:11,307,967...11,308,740
JBrowse link
G Mt3 metallothionein 3 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:16387743)
UniProt
RGD
PMID:16387743, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139
JBrowse link
G Mt4 metallothionein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:11,339,767...11,341,863
Ensembl chr19:11,339,767...11,341,863
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 involved_in ISO (PMID:26514923) RGD PMID:26514923 NCBI chr12:25,497,104...25,506,300
Ensembl chr12:25,497,104...25,506,300
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IEP RGD PMID:12499121 RGD:2317151 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Ppp5c protein phosphatase 5, catalytic subunit IEP RGD PMID:18703135 RGD:8694082 NCBI chr 1:78,944,054...78,968,361
Ensembl chr 1:78,944,040...78,968,329
JBrowse link
G Sod1 superoxide dismutase 1 IEP RGD PMID:17584760 RGD:8655656 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:6478982|PMID:15219627) RGD PMID:15219627 MGI:6478982 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:17719163 RGD:4835171 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:11514557)
UniProt
RGD
PMID:11514557 GO_REF:0000024 NCBI chr 9:66,453,428...66,483,614
Ensembl chr 9:66,453,438...66,483,614
JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 IEP RGD PMID:21467746 RGD:13830870 NCBI chr 2:240,626,198...240,655,874
Ensembl chr 2:240,627,436...240,655,246
JBrowse link
G Ube2d4 ubiquitin-conjugating enzyme E2D 4 (putative) IEP RGD PMID:21467746 RGD:13830870 NCBI chr14:2,933,097...2,934,571
Ensembl chr14:2,933,100...2,934,571
JBrowse link
detoxification of cadmium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc30a1 solute carrier family 30 member 1 involved_in IMP PMID:16741752 BHF-UCL PMID:16741752 RGD:8554228 NCBI chr13:110,677,810...110,681,683
Ensembl chr13:110,677,810...110,681,683
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    response to stimulus 10357
      response to chemical 6186
        response to inorganic substance 827
          response to metal ion 524
            response to cadmium ion 84
              cellular response to cadmium ion + 41
              stress response to cadmium ion + 2
paths to the root