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ONTOLOGY REPORT - ANNOTATIONS


Term:response to arsenic-containing substance
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Accession:GO:0046685 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.
Synonyms:exact_synonym: response to arsenic
 related_synonym: arsenate sensitivity/resistance



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response to arsenic-containing substance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B IEP RGD PMID:16436460 RGD:1598566 NCBI chr 4:25,242,761...25,325,194
Ensembl chr 4:25,242,798...25,325,199
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IEP RGD PMID:16737587 RGD:1598609 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Alad aminolevulinate dehydratase IDA
IEP
RGD PMID:17086449 PMID:19966145 RGD:1599015, RGD:4144139 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474
JBrowse link
G As3mt arsenite methyltransferase acts_upstream_of_or_within IDA PMID:15276411
PMID:11790780
MGI PMID:15276411 PMID:11790780 RGD:8554283, RGD:625365 NCBI chr 1:245,595,939...245,628,921
Ensembl chr 1:245,596,108...245,627,872
JBrowse link
G Atr ATR serine/threonine kinase IEP RGD PMID:29097844 RGD:150340695 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
JBrowse link
G Capn1 calpain 1 IEP RGD PMID:24641850 RGD:13792499 NCBI chr 1:203,275,912...203,300,848
Ensembl chr 1:203,277,344...203,300,177
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A IEP RGD PMID:17487067 RGD:2289668 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Cpox coproporphyrinogen oxidase IEP RGD PMID:2916235 RGD:1600960 NCBI chr11:41,936,585...41,946,568
Ensembl chr11:41,936,591...41,946,746
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP Sodium arsenite RGD PMID:10329507 RGD:2306684 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IEP diphenylarsinic acid RGD PMID:23999541 RGD:7829758 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Fech ferrochelatase IEP RGD PMID:908300 RGD:4145284 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit acts_upstream_of_or_within ISO MGI:2387010 (MGI:3695876|PMID:17189825) RGD PMID:17189825 MGI:3695876 NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP RGD PMID:19761793 RGD:4107724 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 IEP RGD PMID:16483355 RGD:4889531 NCBI chr17:1,027,229...1,058,554
Ensembl chr17:1,027,229...1,058,554
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP RGD PMID:16483355 RGD:4889531 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IDA RGD PMID:15310238 RGD:1358546 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Pten phosphatase and tensin homolog IEP RGD PMID:14713550 RGD:2292552 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptk2 protein tyrosine kinase 2 IEP RGD PMID:15537746 RGD:2292603 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (PMID:17284590) RGD PMID:17284590 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
G Rnf4 ring finger protein 4 involved_in ISO
IEA
IDA
(PMID:20943951)
GO_REF:0000107
RGD
Ensembl
PMID:20943951 PMID:20943951 GO_REF:0000107, RGD:8553289 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566
JBrowse link
G Serpinf1 serpin family F member 1 IEP RGD PMID:23229538 RGD:8655562 NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) IDA RGD PMID:20946910 RGD:10450736 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117
JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B IEP RGD PMID:17190191 RGD:1624169 NCBI chr 7:85,566,520...85,594,526
Ensembl chr 7:85,566,520...85,594,538
JBrowse link
cellular response to arsenic-containing substance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in ISO
IDA
(MGI:5314154|PMID:22157746) RGD PMID:22157746 PMID:22157746 MGI:5314154, RGD:8553654 NCBI chr14:67,787,503...67,839,973
Ensembl chr14:67,787,507...67,840,743
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:21883093) RGD PMID:21883093 NCBI chr  X:9,479,532...9,493,455
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Gsto1 glutathione S-transferase omega 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:11511179)
Ensembl
UniProt
RGD
PMID:11511179 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468
JBrowse link
G Gsto2 glutathione S-transferase omega 2 involved_in ISO
ISS
(PMID:15970797)
GO_REF:0000024
RGD
UniProt
PMID:15970797 GO_REF:0000024 NCBI chr 1:246,731,314...246,757,592
Ensembl chr 1:246,732,089...246,753,866
JBrowse link
G Hmbs hydroxymethylbilane synthase IEP RGD PMID:10416273 RGD:2303399 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957
JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO (MGI:2387878|PMID:12220541) RGD PMID:12220541 MGI:2387878 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEP RGD PMID:16876216 RGD:2317518 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Mknk2 MAPK interacting serine/threonine kinase 2 involved_in ISO (PMID:18299328) RGD PMID:18299328 NCBI chr 7:9,039,771...9,050,832
Ensembl chr 7:9,039,728...9,050,827
JBrowse link
G Ppif peptidylprolyl isomerase F involved_in ISS
ISO
GO_REF:0000024
(MGI:5487522|PMID:21281446)
UniProt
RGD
PMID:21281446 GO_REF:0000024 MGI:5487522 NCBI chr16:1,257,197...1,263,919
Ensembl chr16:1,257,106...1,263,913
JBrowse link
G Rnf4 ring finger protein 4 IEP RGD PMID:20943951 RGD:8553289 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566
JBrowse link
G Urod uroporphyrinogen decarboxylase IEP RGD PMID:10416273 RGD:2303399 NCBI chr 5:130,464,695...130,468,783
Ensembl chr 5:130,455,217...130,468,808
JBrowse link
G Uros uroporphyrinogen III synthase IEP RGD PMID:10416273 RGD:2303399 NCBI chr 1:188,490,832...188,513,659
Ensembl chr 1:188,490,323...188,512,249
JBrowse link
G Zfand2a zinc finger AN1-type containing 2A acts_upstream_of_or_within ISO MGI:3664591 (MGI:3663213|PMID:16973439) RGD PMID:16973439 MGI:3663213 NCBI chr12:15,161,601...15,172,679
Ensembl chr12:15,161,639...15,172,677
JBrowse link
cellular response to arsenite ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:18854321) RGD PMID:18854321 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO
GO_REF:0000024
(PMID:29804830)
UniProt
RGD
PMID:29804830 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Zfand1 zinc finger AN1-type containing 1 involved_in ISO (PMID:29804830) RGD PMID:29804830 NCBI chr 2:91,444,431...91,457,518
Ensembl chr 2:91,444,508...91,453,246
JBrowse link
cellular response to arsenite(3-) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:9848127 RGD:10059616 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Slc38a2 solute carrier family 38, member 2 involved_in ISO (PMID:22215663) RGD PMID:22215663 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436
JBrowse link
G Ube2d2b ubiquitin-conjugating enzyme E2D 2B IEP RGD PMID:24212999 RGD:13830869 NCBI chr14:1,915,999...1,917,473
Ensembl chr14:1,916,845...1,917,416
JBrowse link
cellular response to sodium arsenite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Daxx death-domain associated protein involved_in ISS
ISO
GO_REF:0000024
(PMID:15016915)
UniProt
RGD
PMID:15016915 GO_REF:0000024 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO
ISS
(PMID:27694260)
GO_REF:0000024
RGD
UniProt
PMID:27694260 GO_REF:0000024 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:15016915) RGD PMID:15016915 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Mapk13 mitogen activated protein kinase 13 involved_in ISO
IEA
(PMID:9218798)
GO_REF:0000107
RGD
Ensembl
PMID:9218798 GO_REF:0000107 NCBI chr20:6,835,277...6,845,500
Ensembl chr20:6,835,320...6,844,222
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (MGI:5297619|PMID:21971051) RGD PMID:21971051 MGI:5297619 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
response to sodium arsenite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nefh neurofilament heavy chain IDA RGD PMID:18674524 RGD:9693729 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Nefl neurofilament light chain IDA RGD PMID:18674524 RGD:9693729 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    response to stimulus 10209
      response to chemical 6156
        response to arsenic-containing substance 48
          cellular response to arsenic-containing substance + 24
          detoxification of arsenic-containing substance 0
          response to arsenite ion + 6
          response to sodium arsenite + 7
paths to the root