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ONTOLOGY REPORT - ANNOTATIONS


Term:retinal cell programmed cell death
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Accession:GO:0046666 term browser browse the term
Definition:Programmed cell death that occurs in the developing retina.
Synonyms:exact_synonym: programmed cell death, retina cells;   programmed cell death, retinal cells;   retina cell programmed cell death;   retina programmed cell death;   retinal programmed cell death


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retinal cell programmed cell death term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2-associated X protein IMP (MGI:2677551|PMID:14517994) MGI PMID:14517994 MGI:2677551 NCBI chr 7:45,461,695...45,466,903
Ensembl chr 7:45,461,697...45,466,898
JBrowse link
G Fasl Fas ligand (TNF superfamily, member 6) IMP (MGI:2677551|PMID:14517994) MGI PMID:14517994 MGI:2677551 NCBI chr 1:161,780,691...161,788,495
Ensembl chr 1:161,780,689...161,788,495
JBrowse link
G Slc4a7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 IMP (MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:2680888 NCBI chr14:14,703,011...14,799,944
Ensembl chr14:14,702,279...14,799,940
JBrowse link
negative regulation of retinal cell programmed cell death term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 B cell leukemia/lymphoma 2 IMP (MGI:1336407|PMID:10321489) MGI PMID:10321489 MGI:1336407 NCBI chr 1:106,538,176...106,714,290
Ensembl chr 1:106,538,178...106,714,274
JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 IMP (MGI:3054140|PMID:15363390) MGI PMID:15363390 MGI:3054140 NCBI chr 2:180,774,381...180,776,900
Ensembl chr 2:180,774,381...180,776,900
JBrowse link
positive regulation of retinal cell programmed cell death term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp6 caspase 6 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:129,901,415...129,914,112
Ensembl chr 3:129,901,425...129,914,103
JBrowse link
regulation of retinal cell programmed cell death term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor IDA (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chr 2:109,674,700...109,727,043
Ensembl chr 2:109,674,700...109,727,007
JBrowse link
G Cntf ciliary neurotrophic factor IDA (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chr19:12,763,528...12,765,632
Ensembl chr19:12,763,660...12,765,632
JBrowse link
G Fgf2 fibroblast growth factor 2 IDA (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chr 3:37,348,477...37,410,106
Ensembl chr 3:37,348,346...37,410,108
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23334
    cellular process 17484
      cellular developmental process 4692
        programmed cell death involved in cell development 19
          retinal cell programmed cell death 9
            compound eye retinal cell programmed cell death + 0
            negative regulation of retinal cell programmed cell death + 2
            positive regulation of retinal cell programmed cell death + 1
            regulation of retinal cell programmed cell death + 6
Path 2
Term Annotations click to browse term
  biological_process 23334
    developmental process 7052
      anatomical structure development 6529
        multicellular organism development 5992
          system development 5405
            animal organ development 4159
              animal organ morphogenesis 1157
                sensory organ morphogenesis 320
                  eye morphogenesis 190
                    retinal cell programmed cell death 9
                      compound eye retinal cell programmed cell death + 0
                      negative regulation of retinal cell programmed cell death + 2
                      positive regulation of retinal cell programmed cell death + 1
                      regulation of retinal cell programmed cell death + 6
paths to the root