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ONTOLOGY REPORT - ANNOTATIONS


Term:female sex differentiation
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Accession:GO:0046660 term browser browse the term
Definition:The establishment of the sex of a female organism by physical differentiation.



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female sex differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir135a microRNA 135a acts_upstream_of_or_within ISO (PMID:23946534) RGD PMID:23946534 NCBI chr 7:26,611,990...26,612,089
Ensembl chr 7:26,611,990...26,612,089
JBrowse link
G Mir138-1 microRNA 138-1 acts_upstream_of_or_within ISO (PMID:23946534) RGD PMID:23946534 NCBI chr 8:122,300,966...122,301,064
Ensembl chr 8:122,300,966...122,301,064
JBrowse link
G Mir138-2 microRNA 138-2 acts_upstream_of_or_within ISO (PMID:23946534) RGD PMID:23946534 NCBI chr19:10,674,193...10,674,274
Ensembl chr19:10,674,193...10,674,274
JBrowse link
G Mir183 microRNA 183 acts_upstream_of_or_within ISO (PMID:23946534) RGD PMID:23946534 NCBI chr 4:58,788,614...58,788,723
Ensembl chr 4:58,788,614...58,788,723
JBrowse link
G Mir96 microRNA 96 acts_upstream_of_or_within ISO (PMID:23946534) RGD PMID:23946534 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
JBrowse link
antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccne1 cyclin E1 IEP RGD PMID:17084963 RGD:2289278 NCBI chr 1:90,781,947...90,791,188
Ensembl chr 1:90,781,949...90,791,101
JBrowse link
G Chat choline O-acetyltransferase IEP RGD PMID:16846505 RGD:1600848 NCBI chr16:7,657,362...7,717,093
Ensembl chr16:7,657,362...7,717,093
JBrowse link
G Esr1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386760 (PMID:10976058)
Ensembl
RGD
PMID:10976058 GO_REF:0000107 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO MGI:3038979 (PMID:14978268) RGD PMID:14978268 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Gas2 growth arrest-specific 2 acts_upstream_of_or_within ISO MGI:6187669 (PMID:27734842) RGD PMID:27734842 NCBI chr 1:101,452,361...101,582,619
Ensembl chr 1:101,482,591...101,582,619
JBrowse link
G Gpr149 G protein-coupled receptor 149 acts_upstream_of_or_within ISO MGI:4442841 (PMID:19887567) RGD PMID:19887567 NCBI chr 2:146,909,710...146,981,924
Ensembl chr 2:146,909,713...146,981,167
JBrowse link
G Scaper S-phase cyclin A-associated protein in the ER acts_upstream_of_or_within ISO MGI:4455688 (PMID:32510560) RGD PMID:32510560 NCBI chr 8:55,932,717...56,332,222
Ensembl chr 8:55,933,306...56,332,122
JBrowse link
apoptotic process involved in luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:18566128) RGD PMID:18566128 NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA
(PMID:18566128)
GO_REF:0000107
RGD
Ensembl
PMID:18566128 GO_REF:0000107 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Slit3 slit guidance ligand 3 involved_in ISO
IEA
(PMID:18566128)
GO_REF:0000107
RGD
Ensembl
PMID:18566128 GO_REF:0000107 NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
JBrowse link
cumulus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nppc natriuretic peptide C involved_in ISO MGI:2388899 (PMID:22696190) RGD PMID:22696190 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251
JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA
ISO
GO_REF:0000107
MGI:1856702 (PMID:22696190)
Ensembl
RGD
PMID:22696190 GO_REF:0000107 NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
JBrowse link
development of primary female sexual characteristics term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1b activin A receptor type 1B IEP RGD PMID:11897700 RGD:2315950 NCBI chr 7:132,286,266...132,329,679
Ensembl chr 7:132,286,275...132,329,673
JBrowse link
G Adcyap1r1 ADCYAP receptor type I IEP RGD PMID:17065411 RGD:2315970 NCBI chr 4:84,593,558...84,642,700
Ensembl chr 4:84,593,892...84,642,700
JBrowse link
G Dach1 dachshund family transcription factor 1 acts_upstream_of_or_within ISO MGI:1890446 (PMID:18395837) RGD PMID:18395837 NCBI chr15:74,528,122...74,909,811
Ensembl chr15:74,529,208...74,909,922
JBrowse link
G Dach2 dachshund family transcription factor 2 acts_upstream_of_or_within ISO MGI:1277991 (PMID:18395837) RGD PMID:18395837 NCBI chr  X:78,718,963...79,018,023
Ensembl chr  X:78,451,593...79,017,592
JBrowse link
G Lhfpl2 LHFPL tetraspan subfamily member 2 involved_in ISO (MGI:5897868|PMID:26964900) RGD PMID:26964900 MGI:5897868 NCBI chr 2:25,281,771...25,428,128
Ensembl chr 2:25,281,901...25,427,950
JBrowse link
G Nkx2-1 NK2 homeobox 1 IEP RGD PMID:11161473 RGD:1600161 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
female genitalia development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:3511552|MGI:3588650|MGI:3588652 (PMID:16207732) RGD PMID:16207732 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154536 (PMID:9618522)
Ensembl
RGD
PMID:9618522 GO_REF:0000107 NCBI chr 8:54,552,978...54,580,375
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA
ISO
GO_REF:0000107
MGI:3522129 (PMID:15572448)
Ensembl
RGD
PMID:15572448 GO_REF:0000107 NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:9142501 RGD:4892034 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:9142501 RGD:4892034 NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:58,548,899...58,568,861
Ensembl chr 8:58,549,736...58,568,860
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO
ISS
(PMID:12116211)
GO_REF:0000024
RGD
UniProt
PMID:12116211 GO_REF:0000024 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
female genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (PMID:12004962) RGD PMID:12004962 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269 (PMID:12368184) RGD PMID:12368184 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
female gonad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amhr2 anti-Mullerian hormone receptor type 2 IEP RGD PMID:8119126 RGD:70669 NCBI chr 7:133,579,152...133,588,874
Ensembl chr 7:133,579,393...133,588,258
JBrowse link
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO MGI:2445941 (PMID:11483573) RGD PMID:11483573 NCBI chr20:20,307,731...20,490,746
Ensembl chr20:20,307,731...20,487,433
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:1926343 (PMID:8843194) RGD PMID:8843194 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177226 (PMID:9398843)
Ensembl
RGD
PMID:9398843 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Ccdc182 coiled-coil domain containing 182 involved_in ISO (MGI:3839158|PMID:19301398) RGD PMID:19301398 MGI:3839158 NCBI chr10:73,090,228...73,091,040
Ensembl chr10:73,090,194...73,091,433
JBrowse link
G Cdh6 cadherin 6 IEP RGD PMID:11803548 RGD:727630 NCBI chr 2:62,079,139...62,225,298
Ensembl chr 2:62,079,137...62,225,228
JBrowse link
G Col9a3 collagen type IX alpha 3 chain involved_in ISO (MGI:1930324|PMID:11145610) RGD PMID:11145610 MGI:1930324 NCBI chr 3:167,711,776...167,734,468
Ensembl chr 3:167,711,840...167,734,465
JBrowse link
G Csmd1 CUB and Sushi multiple domains 1 acts_upstream_of_or_within ISO MGI:5473214 (PMID:31604923) RGD PMID:31604923 NCBI chr16:72,218,189...73,818,380
Ensembl chr16:72,218,503...73,817,614
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:2154536 (PMID:9618522)
GO_REF:0000033
GO_REF:0000118
Ensembl
RGD
GO_Central
TreeGrafter
PMID:9618522 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:54,552,978...54,580,375
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:9927330 RGD:8694313 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Fanca FA complementation group A acts_upstream_of_or_within ISO MGI:2674095 (PMID:12913077) RGD PMID:12913077 NCBI chr19:51,304,126...51,362,586
Ensembl chr19:51,304,021...51,362,527
JBrowse link
G Foxl2 forkhead box L2 acts_upstream_of_or_within ISO MGI:894293 (PMID:24739304) RGD PMID:24739304 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427
JBrowse link
G Fst follistatin acts_upstream_of_or_within ISO MGI:1857467 (PMID:15162500) RGD PMID:15162500 NCBI chr 2:46,123,260...46,130,584
Ensembl chr 2:46,123,439...46,130,571
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP RGD PMID:8439611 RGD:4889563 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 IEP RGD PMID:8083215 RGD:633072 NCBI chr 9:66,534,146...66,563,703
Ensembl chr 9:66,534,146...66,563,708
JBrowse link
G Inhbb inhibin subunit beta B IEP RGD PMID:8156918 RGD:9743932 NCBI chr13:30,530,860...30,536,566
Ensembl chr13:30,530,860...30,537,832
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor acts_upstream_of_or_within ISO MGI:2181999 (PMID:11145748), (PMID:15951841) RGD PMID:11145748 PMID:15951841 NCBI chr 6:5,661,871...5,728,109
Ensembl chr 6:5,661,871...5,724,521
JBrowse link
G Lhx8 LIM homeobox 8 acts_upstream_of_or_within ISO MGI:2182594 (PMID:16690745) RGD PMID:16690745 NCBI chr 2:243,244,958...243,269,624
Ensembl chr 2:243,244,961...243,269,416
JBrowse link
G Lhx9 LIM homeobox 9 acts_upstream_of_or_within ISO MGI:1888554 (PMID:10706291) RGD PMID:10706291 NCBI chr13:50,389,052...50,409,947
Ensembl chr13:50,389,738...50,410,806
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 involved_in ISO
ISS
(PMID:29478779)
GO_REF:0000024
RGD
UniProt
PMID:29478779 GO_REF:0000024 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 involved_in IEP
ISO
ISS
(PMID:27378692)
GO_REF:0000024
RGD
UniProt
PMID:27378692 PMID:12865342 GO_REF:0000024, RGD:1598968 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328
JBrowse link
G Nup107 nucleoporin 107 involved_in IEA
ISO
GO_REF:0000107
(PMID:26485283)
Ensembl
RGD
PMID:26485283 GO_REF:0000107 NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha acts_upstream_of_or_within ISO MGI:1914283 (PMID:19056881) RGD PMID:19056881 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Pitx2 paired-like homeodomain 2 IEP RGD PMID:21325833 RGD:5131994 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within ISO MGI:97530 (PMID:19056881) RGD PMID:19056881 NCBI chr 1:185,427,982...185,479,157
Ensembl chr 1:185,428,048...185,479,156
JBrowse link
G Schip1 schwannomin interacting protein 1 acts_upstream_of_or_within ISO MGI:97530 (PMID:19056881) RGD PMID:19056881 NCBI chr 2:152,127,171...152,888,587
Ensembl chr 2:152,126,953...152,888,585
JBrowse link
G Serpine1 serpin family E member 1 IDA RGD PMID:8527517 RGD:8547900 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108078 (PMID:19100252)
Ensembl
RGD
PMID:19100252 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO MGI:3526851 (PMID:19056881) RGD PMID:19056881 NCBI chr20:29,047,793...29,094,209
Ensembl chr20:29,047,796...29,094,084
JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO MGI:1349428 (PMID:24739304) RGD PMID:24739304 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Sprr2b small proline rich protein 2B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:177,852,824...177,853,096
Ensembl chr 2:177,852,824...177,853,096
JBrowse link
G Sprr2d small proline-rich protein 2D involved_in ISO (MGI:3839158|PMID:19301398) RGD PMID:19301398 MGI:3839158 NCBI chr 2:177,870,082...177,870,679
Ensembl chr 2:177,870,434...177,870,679
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO MGI:3526866 (PMID:19056881) RGD PMID:19056881 NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327
JBrowse link
G Tox2 TOX high mobility group box family member 2 IEP RGD PMID:14764631 RGD:1302820 NCBI chr 3:151,853,294...151,980,086
Ensembl chr 3:151,853,294...151,980,749
JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO MGI:3774112 (PMID:18070917) RGD PMID:18070917 NCBI chr10:47,247,630...47,249,335
Ensembl chr10:47,245,637...47,249,333
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO MGI:1857453|MGI:4399122 (PMID:15162500), (PMID:19830824), (PMID:20106871) RGD PMID:15162500 PMID:19830824 PMID:20106871 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
G Zfp42 zinc finger protein 42 involved_in ISO (PMID:18281244) RGD PMID:18281244 NCBI chr16:48,836,463...48,845,443
Ensembl chr16:48,836,648...48,845,401
JBrowse link
female gonad morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386394 (PMID:24739304)
Ensembl
RGD
PMID:24739304 GO_REF:0000107 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
follicle-stimulating hormone signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) RGD PMID:21048919 MGI:4849324 NCBI chr 3:167,265,435...167,270,197
Ensembl chr 3:167,265,296...167,270,195
JBrowse link
G Arrb1 arrestin, beta 1 IDA RGD PMID:16899567 RGD:4140424 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
JBrowse link
G Arrb2 arrestin, beta 2 IDA RGD PMID:16899567 RGD:4140424 NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850
JBrowse link
G Cenpi centromere protein I IEP RGD PMID:7758824 RGD:728588 NCBI chr  X:97,515,919...97,567,671
Ensembl chr  X:97,515,972...97,567,657
JBrowse link
G Fshb follicle stimulating hormone subunit beta acts_upstream_of_or_within
involved_in
TAS
ISO
IBA
MGI:1857434 (PMID:9020850)
GO_REF:0000033
RGD
GO_Central
PMID:9020850 PMID:2504572 GO_REF:0000033, RGD:61788 NCBI chr 3:93,548,560...93,552,370
Ensembl chr 3:93,548,560...93,552,370
JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(PMID:10330114)
GO_REF:0000033
(PMID:11847099), (PMID:24692546)
RGD
GO_Central
PMID:10330114 PMID:11847099 PMID:24692546 PMID:12145341 PMID:16899567 More... GO_REF:0000033, RGD:1601255, RGD:4140424, RGD:1601258 NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 IDA RGD PMID:16899567 RGD:4140424 NCBI chr 1:201,580,823...201,601,580
Ensembl chr 1:201,581,480...201,601,582
JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:20068007 RGD:6902910 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Slit2 slit guidance ligand 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
initiation of primordial ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO MGI:2668328 (PMID:12855809) RGD PMID:12855809 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Gas2 growth arrest-specific 2 acts_upstream_of_or_within ISO MGI:6187669 (PMID:27734842) RGD PMID:27734842 NCBI chr 1:101,452,361...101,582,619
Ensembl chr 1:101,482,591...101,582,619
JBrowse link
luteinization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2m alpha-2-macroglobulin IEP RGD PMID:2479532 RGD:10046034 NCBI chr 4:154,897,770...154,947,787
Ensembl chr 4:154,897,877...154,947,786
JBrowse link
G Capn5 calpain 5 IEP RGD PMID:19415717 RGD:2313170 NCBI chr 1:152,416,252...152,472,923
Ensembl chr 1:152,416,252...152,472,923
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:23183184 RGD:7257725 NCBI chr 8:54,552,978...54,580,375
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Fzd4 frizzled class receptor 4 acts_upstream_of_or_within ISO MGI:2387667 (PMID:16093361) RGD PMID:16093361 NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:8835383 RGD:7207087 NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
JBrowse link
G Mmp2 matrix metallopeptidase 2 IEP RGD PMID:10537164 RGD:7207086 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 acts_upstream_of_or_within ISO MGI:2179995|MGI:2180013 (PMID:15118069) RGD PMID:15118069 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1914283|MGI:2449440|MGI:3689423 (PMID:19056881)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19056881 GO_REF:0000024 GO_REF:0000107 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Pgr progesterone receptor IEP RGD PMID:8344215 RGD:1601291 NCBI chr 8:6,072,673...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within ISO MGI:97530 (PMID:19056881) RGD PMID:19056881 NCBI chr 1:185,427,982...185,479,157
Ensembl chr 1:185,428,048...185,479,156
JBrowse link
G Ptprn protein tyrosine phosphatase, receptor type, N involved_in ISS
ISO
GO_REF:0000024
(MGI:3769282|PMID:16269463)
UniProt
RGD
PMID:16269463 GO_REF:0000024 MGI:3769282 NCBI chr 9:76,741,010...76,756,704
Ensembl chr 9:76,741,016...76,756,190
JBrowse link
G Schip1 schwannomin interacting protein 1 acts_upstream_of_or_within ISO MGI:97530 (PMID:19056881) RGD PMID:19056881 NCBI chr 2:152,127,171...152,888,587
Ensembl chr 2:152,126,953...152,888,585
JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3526851 (PMID:19056881)
Ensembl
RGD
PMID:19056881 GO_REF:0000107 NCBI chr20:29,047,793...29,094,209
Ensembl chr20:29,047,796...29,094,084
JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:103035 (PMID:9630227) RGD PMID:9630227 NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
MGI:103036 (PMID:9630227)
GO_REF:0000107
RGD
Ensembl
PMID:9630227 PMID:10598581 GO_REF:0000107, RGD:1601386 NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
JBrowse link
luteinizing hormone signaling pathway involved in ovarian follicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhb luteinizing hormone subunit beta acts_upstream_of_or_within ISO (PMID:19474061) RGD PMID:19474061 NCBI chr 1:95,898,269...95,901,973
Ensembl chr 1:95,900,984...95,901,972
Ensembl chr 1:95,900,984...95,901,972
JBrowse link
luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp12 caspase 12 IEP RGD PMID:25332219 RGD:13782179 NCBI chr 8:2,642,296...2,669,549
Ensembl chr 8:2,642,434...2,674,037
JBrowse link
G Casp2 caspase 2 IEP RGD PMID:16940287 RGD:4107077 NCBI chr 4:71,149,632...71,167,388
Ensembl chr 4:71,149,669...71,167,379
JBrowse link
G Casp3 caspase 3 IEP RGD PMID:25332219 RGD:13782179 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 IEP RGD PMID:25332219 RGD:13782179 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Dll4 delta like canonical Notch ligand 4 IEP RGD PMID:21209419 RGD:155663486 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:25332219 RGD:13782179 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:8835383 RGD:7207087 NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP RGD PMID:10537164 RGD:7207086 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
JBrowse link
G Mmp19 matrix metallopeptidase 19 IEP RGD PMID:15286033 RGD:1642024 NCBI chr 7:1,221,229...1,229,555
Ensembl chr 7:1,221,343...1,229,555
JBrowse link
G Notch1 notch receptor 1 IEP RGD PMID:21209419 RGD:155663486 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Notch4 notch receptor 4 IEP RGD PMID:21209419 RGD:155663486 NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
JBrowse link
G Pla2g4a phospholipase A2 group IVA IEP RGD PMID:11444430 RGD:1642472 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
negative regulation of female gonad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 involved_in ISO (MGI:3839158|PMID:19301398) RGD PMID:19301398 MGI:3839158 NCBI chr 3:22,464,786...22,486,328
Ensembl chr 3:22,465,502...22,486,328
JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:3839158|PMID:19301398)
UniProt
RGD
PMID:19301398 GO_REF:0000024 MGI:3839158 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
G Zfpm2 zinc finger protein, multitype 2 involved_in ISO (MGI:3839158|PMID:19301398) RGD PMID:19301398 MGI:3839158 NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
JBrowse link
negative regulation of ovarian follicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amh anti-Mullerian hormone involved_in IDA
ISO
(MGI:6827316|PMID:11861535) RGD PMID:11861535 PMID:16720622 MGI:6827316, RGD:2315646 NCBI chr 7:8,906,776...8,909,192
Ensembl chr 7:8,906,836...8,909,282
JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:6094534|PMID:18653706)
UniProt
RGD
PMID:18653706 GO_REF:0000024 MGI:6094534 NCBI chr 8:108,254,385...108,260,020
Ensembl chr 8:108,250,667...108,260,647
JBrowse link
negative regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir222 microRNA 222 IMP RGD PMID:33230470 RGD:151893462 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:18703674) RGD PMID:18703674 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
ovarian cumulus expansion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp15 bone morphogenetic protein 15 involved_in ISO (PMID:24313324) RGD PMID:24313324 NCBI chr  X:16,169,123...16,174,187
Ensembl chr  X:16,169,123...16,174,187
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in ISO (MGI:2136692|PMID:11416163) RGD PMID:11416163 MGI:2136692 NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
JBrowse link
G Ereg epiregulin involved_in IDA PMID:15459120 UniProt PMID:15459120 RGD:2316284 NCBI chr14:17,027,287...17,041,062
Ensembl chr14:17,027,287...17,041,062
JBrowse link
G Gdf9 growth differentiation factor 9 involved_in ISO (PMID:24313324) RGD PMID:24313324 NCBI chr10:37,589,200...37,599,970
Ensembl chr10:37,595,679...37,599,672
JBrowse link
G Ptx3 pentraxin 3 acts_upstream_of_or_within ISO (PMID:17675295) RGD PMID:17675295 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
G Tnfaip6 TNF alpha induced protein 6 involved_in ISO (MGI:6204879|PMID:26468290) RGD PMID:26468290 MGI:6204879 NCBI chr 3:36,502,250...36,521,652
Ensembl chr 3:36,502,188...36,521,649
JBrowse link
ovarian follicle atresia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 IEP RGD PMID:16469493 RGD:2313111 NCBI chr 8:54,991,294...55,047,276
Ensembl chr 8:54,991,296...55,047,391
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:8612534 RGD:8662934 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:6094534|PMID:18653706)
UniProt
RGD
PMID:18653706 GO_REF:0000024 MGI:6094534 NCBI chr 8:108,254,385...108,260,020
Ensembl chr 8:108,250,667...108,260,647
JBrowse link
G Nefh neurofilament heavy chain IDA RGD PMID:22315443 RGD:9698432 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Phb1 prohibitin 1 IEP RGD PMID:15028627 RGD:2292415 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
ovarian follicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C IEP RGD PMID:16709598 RGD:2306240 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
JBrowse link
G Adcyap1 adenylate cyclase activating polypeptide 1 IDA RGD PMID:20138961 RGD:2325269 NCBI chr 9:113,102,632...113,122,500
Ensembl chr 9:113,103,718...113,109,773
JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) RGD PMID:21048919 MGI:4849324 NCBI chr 3:167,265,435...167,270,197
Ensembl chr 3:167,265,296...167,270,195
JBrowse link
G Ahr aryl hydrocarbon receptor IMP RGD PMID:20466593 RGD:2325665 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Amh anti-Mullerian hormone involved_in ISO (MGI:2153557|PMID:11606457) RGD PMID:11606457 MGI:2153557 NCBI chr 7:8,906,776...8,909,192
Ensembl chr 7:8,906,836...8,909,282
JBrowse link
G Angpt1 angiopoietin 1 IMP RGD PMID:17989359 RGD:1643337 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:1926343 (PMID:8843194) RGD PMID:8843194 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEP
ISO
MGI:1857429|MGI:88139 (PMID:10894153), (PMID:17244737) RGD PMID:10894153 PMID:17244737 PMID:17570453 RGD:2293075 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
MGI:1857134 (PMID:7628407)
GO_REF:0000107
RGD
Ensembl
PMID:7628407 PMID:17570453 GO_REF:0000107, RGD:2293075 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Bcl2l1 Bcl2-like 1 acts_upstream_of_or_within IMP
ISO
MGI:2176699|MGI:99702 (PMID:10894153) RGD PMID:10894153 PMID:17989359 RGD:1643337 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Bmp4 bone morphogenetic protein 4 IMP RGD PMID:12801979 RGD:2289015 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Capn5 calpain 5 IEP RGD PMID:19415717 RGD:2313170 NCBI chr 1:152,416,252...152,472,923
Ensembl chr 1:152,416,252...152,472,923
JBrowse link
G Ccnd2 cyclin D2 IEP RGD PMID:17971845 RGD:2289161 NCBI chr 4:159,966,883...159,989,261
Ensembl chr 4:159,962,363...159,989,495
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:1097043|PMID:9303532)
UniProt
Ensembl
RGD
PMID:9303532 GO_REF:0000024 GO_REF:0000107 MGI:1097043 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Ctnna1 catenin alpha 1 IEP RGD PMID:10864803 RGD:2289809 NCBI chr18:26,728,246...26,860,911
Ensembl chr18:26,728,485...26,860,910
JBrowse link
G Dmc1 DNA meiotic recombinase 1 acts_upstream_of_or_within ISO MGI:2176331 (PMID:15640358) RGD PMID:15640358 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952
JBrowse link
G Dmrta1 DMRT-like family A1 acts_upstream_of_or_within ISO MGI:3699123 (PMID:16982677) RGD PMID:16982677 NCBI chr 5:104,415,893...104,422,433
Ensembl chr 5:104,415,893...104,422,433
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta involved_in ISO
IEA
ISS
(PMID:15507143)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15507143 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:15507143)
UniProt
Ensembl
RGD
PMID:15507143 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:25,183,177...25,188,832
Ensembl chr 6:25,183,186...25,188,829
JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in ISO
ISS
(PMID:15507143)
GO_REF:0000024
RGD
UniProt
PMID:15507143 GO_REF:0000024 NCBI chr11:80,394,433...80,404,468
Ensembl chr11:80,394,433...80,404,419
JBrowse link
G Ermp1 endoplasmic reticulum metallopeptidase 1 IMP RGD PMID:17267443 RGD:1625681 NCBI chr 1:227,383,992...227,422,120
Ensembl chr 1:227,387,920...227,436,909
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within IEP
ISO
MGI:2152217|MGI:2386761 (PMID:10976058), (PMID:9861029) RGD PMID:9861029 PMID:10976058 PMID:17971845 RGD:2289161 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Fancf FA complementation group F acts_upstream_of_or_within ISO (PMID:21915857) RGD PMID:21915857 NCBI chr 1:101,449,120...101,451,936
Ensembl chr 1:101,450,389...101,451,923
JBrowse link
G Fancg FA complementation group G acts_upstream_of_or_within ISO MGI:2183473 (PMID:11823446) RGD PMID:11823446 NCBI chr 5:57,230,287...57,240,067
Ensembl chr 5:57,231,685...57,240,029
JBrowse link
G Fgf7 fibroblast growth factor 7 IMP primordial to primary follicle transition RGD PMID:16000551 RGD:2289108 NCBI chr 3:113,280,448...113,333,279
Ensembl chr 3:113,281,283...113,332,929
JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 IEP RGD PMID:23401597 RGD:11566032 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1857869 (PMID:16412416) RGD PMID:16412416 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxl2 forkhead box L2 involved_in
acts_upstream_of_or_within
ISO (PMID:12161610)
MGI:3029503|MGI:3044226|MGI:894293 (PMID:14736745), (PMID:15056605), (PMID:24739304)
RGD PMID:12161610 PMID:14736745 PMID:15056605 PMID:24739304 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427
JBrowse link
G Fshb follicle stimulating hormone subunit beta acts_upstream_of_or_within ISO MGI:1857434 (PMID:9020850) RGD PMID:9020850 NCBI chr 3:93,548,560...93,552,370
Ensembl chr 3:93,548,560...93,552,370
JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO MGI:2384087|MGI:2384130 (PMID:10803590), (PMID:11089565), (PMID:11459817), (PMID:12135868), (PMID:12801993), (PMID:9811848) RGD PMID:9811848 PMID:10803590 PMID:11089565 PMID:11459817 PMID:12135868 More... NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP RGD PMID:21190960 RGD:10002781 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20591976 RGD:4145386 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Immp2l inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO MGI:3765965 (PMID:18094351) RGD PMID:18094351 NCBI chr 6:58,070,035...58,970,165
Ensembl chr 6:58,070,283...58,969,840
JBrowse link
G Inha inhibin subunit alpha IMP RGD PMID:18243599 RGD:2290445 NCBI chr 9:76,994,465...76,997,366
Ensembl chr 9:76,993,589...76,997,248
JBrowse link
G Inhba inhibin subunit beta A involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q04999 (PMID:10932194)
UniProt
RGD
PMID:10932194 GO_REF:0000024 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982
JBrowse link
G Kdr kinase insert domain receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17050862)
Ensembl
RGD
PMID:17050862 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (MGI:4820916|PMID:20536544) RGD PMID:20536544 MGI:4820916 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Kitlg KIT ligand IDA RGD PMID:15062541 RGD:1302364 NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214
JBrowse link
G Kmt2b lysine methyltransferase 2B acts_upstream_of_or_within ISO MGI:2176052|MGI:3056522|MGI:3623309 (PMID:20808952) RGD PMID:20808952 NCBI chr 1:85,821,700...85,840,987
Ensembl chr 1:85,821,753...85,841,326
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1933737 (PMID:15659488)
Ensembl
RGD
PMID:15659488 GO_REF:0000107 NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:2181999 (PMID:11145748)
GO_REF:0000118
GO_REF:0000033
Ensembl
RGD
TreeGrafter
GO_Central
PMID:11145748 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:5,661,871...5,728,109
Ensembl chr 6:5,661,871...5,724,521
JBrowse link
G Mmp14 matrix metallopeptidase 14 IEP RGD PMID:15617683 RGD:1582601 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Mmp19 matrix metallopeptidase 19 IEP RGD PMID:15286033 RGD:1642024 NCBI chr 7:1,221,229...1,229,555
Ensembl chr 7:1,221,343...1,229,555
JBrowse link
G Mmp2 matrix metallopeptidase 2 IDA RGD PMID:15617683 RGD:1582601 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
JBrowse link
G Msh4 mutS homolog 4 acts_upstream_of_or_within ISO MGI:2179034 (PMID:10809667) RGD PMID:10809667 NCBI chr 2:242,785,392...242,844,609
Ensembl chr 2:242,792,661...242,843,487
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:9071960 RGD:10059613 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 IEP RGD PMID:12374465 RGD:9590129 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268
JBrowse link
G Nobox NOBOX oogenesis homeobox acts_upstream_of_or_within ISO MGI:3053093 (PMID:15326356), (PMID:17641088) RGD PMID:15326356 PMID:17641088 NCBI chr 4:72,128,931...72,134,436
Ensembl chr 4:72,128,931...72,134,436
JBrowse link
G Nppc natriuretic peptide C involved_in ISO MGI:2388899 (PMID:22696190) RGD PMID:22696190 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251
JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in ISO MGI:1856702 (PMID:22696190) RGD PMID:22696190 NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3045401 (PMID:15143167)
Ensembl
RGD
PMID:15143167 GO_REF:0000107 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935
JBrowse link
G Phb1 prohibitin 1 IEP RGD PMID:15028627 RGD:2292415 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Scaper S-phase cyclin A-associated protein in the ER acts_upstream_of_or_within ISO MGI:4455688 (PMID:32510560) RGD PMID:32510560 NCBI chr 8:55,932,717...56,332,222
Ensembl chr 8:55,933,306...56,332,122
JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
MGI:1349428|MGI:2386394 (PMID:24739304)
GO_REF:0000107
RGD
Ensembl
PMID:24739304 PMID:15698987 GO_REF:0000107, RGD:12903277 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857873 (PMID:9724058)
UniProt
RGD
PMID:9724058 GO_REF:0000024 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 acts_upstream_of_or_within ISO MGI:3629211 (PMID:16690745) RGD PMID:16690745 NCBI chr 3:8,662,995...8,667,521
Ensembl chr 3:8,663,318...8,667,388
JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO MGI:2178805 (PMID:15640358) RGD PMID:15640358 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 acts_upstream_of_or_within ISO MGI:2152347 (PMID:11557891) RGD PMID:11557891 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356
JBrowse link
G Ube3a ubiquitin protein ligase E3A acts_upstream_of_or_within ISO MGI:2181811 (PMID:11756548) RGD PMID:11756548 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (PMID:17050862) RGD PMID:17050862 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Vgf VGF nerve growth factor inducible involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179681 (PMID:10433265)
Ensembl
RGD
PMID:10433265 GO_REF:0000107 NCBI chr12:19,637,313...19,645,123
Ensembl chr12:19,637,320...19,640,341
JBrowse link
G Zfp830 zinc finger protein 830 involved_in ISS
ISO
GO_REF:0000024
(MGI:5707559|PMID:25168238)
UniProt
RGD
PMID:25168238 GO_REF:0000024 MGI:5707559 NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523
JBrowse link
G Zfx zinc finger protein X-linked acts_upstream_of_or_within ISO MGI:2450147 (PMID:9187153) RGD PMID:9187153 NCBI chr  X:58,804,690...58,853,155
Ensembl chr  X:58,804,691...58,853,265
JBrowse link
ovarian follicle rupture term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:1857122 (PMID:11384650) RGD PMID:11384650 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Edn2 endothelin 2 IDA RGD PMID:16410304 RGD:1581792 NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 involved_in ISO (MGI:3689796|PMID:15919748) RGD PMID:15919748 MGI:3689796 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761
JBrowse link
ovulation from ovarian follicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3574351 (PMID:14668204)
Ensembl
RGD
PMID:14668204 GO_REF:0000107 NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103
JBrowse link
G Afp alpha-fetoprotein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388722 (PMID:12297623)
Ensembl
RGD
PMID:12297623 GO_REF:0000107 NCBI chr14:17,573,412...17,591,476
Ensembl chr14:17,573,412...17,591,480
JBrowse link
G Cbr1 carbonyl reductase 1 IEP RGD PMID:10642578 RGD:1299856 NCBI chr11:32,860,571...32,862,981
Ensembl chr11:32,908,950...32,911,393
Ensembl chr11:32,908,950...32,911,393
JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO MGI:2668328 (PMID:12855809) RGD PMID:12855809 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Lep leptin IDA RGD PMID:17071778 RGD:1582677 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lepr leptin receptor IEP RGD PMID:12959975 RGD:1582680 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
JBrowse link
G Mmp19 matrix metallopeptidase 19 IEP RGD PMID:15286033 RGD:1642024 NCBI chr 7:1,221,229...1,229,555
Ensembl chr 7:1,221,343...1,229,555
JBrowse link
G Mmp2 matrix metallopeptidase 2 IEP RGD PMID:14668206 RGD:1582606 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
JBrowse link
G Nos2 nitric oxide synthase 2 NOT|acts_upstream_of_or_within ISO MGI:2158791 (PMID:11779605) RGD PMID:11779605 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2657240 (PMID:11779605)
Ensembl
RGD
PMID:11779605 GO_REF:0000107 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO MGI:2451168|MGI:2451182 (PMID:10518565) RGD PMID:10518565 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884
JBrowse link
G Pgr progesterone receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2674932 (PMID:12897242)
Ensembl
RGD
PMID:12897242 GO_REF:0000107 NCBI chr 8:6,072,673...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
G Pla2g4a phospholipase A2 group IVA IMP RGD PMID:10189070 RGD:1642477 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Sirt1 sirtuin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2448246 (PMID:12482959)
Ensembl
RGD
PMID:12482959 GO_REF:0000107 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
JBrowse link
positive regulation of antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:15944932 RGD:10003098 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4943385|PMID:18420282), (MGI:4943828|PMID:20382503)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18420282 PMID:20382503 GO_REF:0000024 GO_REF:0000107 MGI:4943385 MGI:4943828 NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513
JBrowse link
positive regulation of ovarian follicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfn2 mitofusin 2 IMP RGD PMID:25120590 RGD:13204819 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:15944932 RGD:10003098 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (MGI:6217799|PMID:27050391) RGD PMID:27050391 MGI:6217799 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IMP RGD PMID:22905678 RGD:13210788 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4943379|PMID:18667753), (MGI:4943411|PMID:15579591)
(PMID:12052239)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12052239 PMID:15579591 PMID:18667753 GO_REF:0000024 GO_REF:0000107 MGI:4943379 MGI:4943411 NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513
JBrowse link
positive regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfn2 mitofusin 2 IMP RGD PMID:25120590 RGD:13204819 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Retn resistin IDA RGD PMID:21239528 RGD:7207233 NCBI chr12:1,710,881...1,712,621
Ensembl chr12:1,710,881...1,712,620
JBrowse link
G Runx1 RUNX family transcription factor 1 IMP RGD PMID:16675540 RGD:6482842 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
JBrowse link
preantral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amh anti-Mullerian hormone IDA RGD PMID:11133686 RGD:2315649 NCBI chr 7:8,906,776...8,909,192
Ensembl chr 7:8,906,836...8,909,282
JBrowse link
G Gpr149 G protein-coupled receptor 149 acts_upstream_of_or_within ISO MGI:4442841 (PMID:19887567) RGD PMID:19887567 NCBI chr 2:146,909,710...146,981,924
Ensembl chr 2:146,909,713...146,981,167
JBrowse link
G Zfp830 zinc finger protein 830 involved_in ISS
ISO
GO_REF:0000024
(MGI:5707559|PMID:25168238)
UniProt
RGD
PMID:25168238 GO_REF:0000024 MGI:5707559 NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523
JBrowse link
primary ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO MGI:2384087 (PMID:12801993) RGD PMID:12801993 NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
JBrowse link
G Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3839324 (PMID:18753606)
Ensembl
RGD
PMID:18753606 GO_REF:0000107 NCBI chr 2:139,362,246...139,384,700
Ensembl chr 2:139,362,246...139,384,699
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IMP RGD PMID:22905678 RGD:13210788 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 acts_upstream_of_or_within ISO MGI:2387667 (PMID:16093361) RGD PMID:16093361 NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
JBrowse link
G Inhba inhibin subunit beta A involved_in ISO
ISS
UniProtKB:Q04999 (PMID:10932194)
GO_REF:0000024
RGD
UniProt
PMID:10932194 GO_REF:0000024 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982
JBrowse link
regulation of female gonad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insr insulin receptor involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q60751 (MGI:5493430|PMID:23300479)
Ensembl
RGD
PMID:23300479 GO_REF:0000107 MGI:5493430 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator acts_upstream_of_or_within ISO MGI:3784016 (PMID:18495683) RGD PMID:18495683 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
JBrowse link
regulation of ovarian follicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnrh1 gonadotropin releasing hormone 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856393 (PMID:10803590)
Ensembl
RGD
PMID:10803590 GO_REF:0000107 NCBI chr15:41,972,482...41,976,690
Ensembl chr15:41,972,905...41,973,581
Ensembl chr15:41,972,905...41,973,581
JBrowse link
G Umodl1 uromodulin-like 1 acts_upstream_of_or_within ISO (PMID:23190605) RGD PMID:23190605 NCBI chr20:9,027,751...9,087,133
Ensembl chr20:9,025,724...9,087,146
JBrowse link
regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf9 growth differentiation factor 9 involved_in ISO (PMID:12050262), (PMID:20660033) RGD PMID:12050262 PMID:20660033 NCBI chr10:37,589,200...37,599,970
Ensembl chr10:37,595,679...37,599,672
JBrowse link
vagina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl Axl receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:104294|MGI:96965 (PMID:18393392) RGD PMID:18393392 NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265
JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:99702 (PMID:11163212) RGD PMID:11163212 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1097161 (PMID:11163212) RGD PMID:11163212 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Esr1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:109392 (PMID:10976058)
Ensembl
RGD
PMID:10976058 GO_REF:0000107 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO MGI:1352467 (PMID:10976058) RGD PMID:10976058 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3777712|PMID:14695376)
UniProt
RGD
PMID:14695376 GO_REF:0000024 MGI:3777712 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:3690825|PMID:16143106)
UniProt
Ensembl
RGD
PMID:16143106 GO_REF:0000024 GO_REF:0000107 MGI:3690825 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within ISO MGI:104294|MGI:1347244 (PMID:18393392) RGD PMID:18393392 NCBI chr 3:115,939,351...116,045,141
Ensembl chr 3:115,939,351...116,046,554
JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1347244|MGI:96965 (PMID:18393392)
Ensembl
RGD
PMID:18393392 GO_REF:0000107 NCBI chr 3:106,777,686...106,797,154
Ensembl chr 3:106,777,635...106,797,142
JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857617 (PMID:15073149)
Ensembl
RGD
PMID:15073149 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    multicellular organismal process 8887
      multicellular organism development 5276
        female sex differentiation 191
          development of primary female sexual characteristics + 171
          female genitalia development + 20
          female pigmentation + 0
Path 2
Term Annotations click to browse term
  biological_process 20292
    developmental process 7042
      anatomical structure development 6550
        multicellular organism development 5276
          female sex differentiation 191
            development of primary female sexual characteristics + 171
            female genitalia development + 20
            female pigmentation + 0
paths to the root