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ONTOLOGY REPORT - ANNOTATIONS


Term:gamma-delta T cell activation
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Accession:GO:0046629 term browser browse the term
Definition:The change in morphology and behavior of a gamma-delta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
Synonyms:exact_synonym: gamma-delta T lymphocyte activation


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gamma-delta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxadr coxsackie virus and adenovirus receptor involved_in IDA (MGI:4822257|PMID:20813954) UniProt PMID:20813954 MGI:4822257 NCBI chr16:78,301,226...78,359,785
Ensembl chr16:78,301,489...78,359,774
JBrowse link
G Itk IL2 inducible T cell kinase involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr11:46,325,148...46,389,515
Ensembl chr11:46,325,150...46,389,515
JBrowse link
G Jaml junction adhesion molecule like involved_in IDA (MGI:4822257|PMID:20813954) UniProt PMID:20813954 MGI:4822257 NCBI chr 9:45,079,153...45,108,531
Ensembl chr 9:45,079,183...45,108,534
JBrowse link
G Mill2 MHC I like leukocyte 2 involved_in ISO (PMID:9497295) UniProt PMID:9497295 NCBI chr 7:18,839,958...18,869,696
Ensembl chr 7:18,839,966...18,865,402
JBrowse link
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr9 chemokine (C-C motif) receptor 9 acts_upstream_of_or_within IMP (MGI:5629467|PMID:25348153) MGI PMID:25348153 MGI:5629467 NCBI chr 9:123,767,211...123,783,457
Ensembl chr 9:123,678,439...123,784,330
JBrowse link
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within IDA
IMP
(MGI:5629467|PMID:25348153) MGI PMID:25348153 MGI:5629467 NCBI chr14:121,911,434...121,915,888
Ensembl chr14:121,911,253...121,915,781
JBrowse link
G Klrc1 killer cell lectin-like receptor subfamily C, member 1 involved_in ISO (PMID:18064301) UniProt PMID:18064301 NCBI chr 6:129,666,015...129,682,852
Ensembl chr 6:129,666,015...129,678,973
JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged 2 involved_in IMP (MGI:1342169|PMID:10383933) UniProt PMID:10383933 MGI:1342169 NCBI chr12:112,907,803...112,929,812
Ensembl chr12:112,907,819...112,929,776
JBrowse link
G Sox13 SRY (sex determining region Y)-box 13 involved_in IMP (MGI:3695974|PMID:17218525), (MGI:6276541|PMID:30413363) UniProt PMID:17218525 PMID:30413363 MGI:3695974 MGI:6276541 NCBI chr 1:133,382,300...133,424,459
Ensembl chr 1:133,382,303...133,424,377
JBrowse link
G Tcf7 transcription factor 7, T cell specific involved_in IMP (MGI:6276541|PMID:30413363) UniProt PMID:30413363 MGI:6276541 NCBI chr11:52,246,527...52,283,383
Ensembl chr11:52,252,371...52,283,331
JBrowse link
gamma-delta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scart2 scavenger receptor family member expressed on T cells 2 acts_upstream_of_or_within IDA (MGI:3803061|PMID:18641307) MGI PMID:18641307 MGI:3803061 NCBI chr 7:140,247,279...140,300,734
Ensembl chr 7:140,247,284...140,300,736
JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gimap3 GTPase, IMAP family member 3 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:48,764,464...48,770,851
Ensembl chr 6:48,764,464...48,770,851
JBrowse link
G Gimap5 GTPase, IMAP family member 5 involved_in ISO RGD
MGI
PMID:11859104 GO_REF:0000096 MGI:4417868 RGD:625608 NCBI chr 6:48,746,197...48,754,200
Ensembl chr 6:48,746,197...48,754,210
JBrowse link
G Lck lymphocyte protein tyrosine kinase acts_upstream_of_or_within IMP (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chr 4:129,548,344...129,573,641
Ensembl chr 4:129,548,344...129,573,641
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr 3:131,110,297...131,224,357
Ensembl chr 3:131,110,471...131,224,356
JBrowse link
G Nckap1l NCK associated protein 1 like involved_in IMP (MGI:3818191|PMID:19015308) UniProt PMID:19015308 MGI:3818191 NCBI chr15:103,453,783...103,502,860
Ensembl chr15:103,453,794...103,498,810
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within IMP (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chr 1:138,062,859...138,175,756
Ensembl chr 1:138,062,861...138,175,708
JBrowse link
G Sox13 SRY (sex determining region Y)-box 13 involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr 1:133,382,300...133,424,459
Ensembl chr 1:133,382,303...133,424,377
JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr13:28,948,919...28,953,699
Ensembl chr13:28,948,919...28,953,713
JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within IGI (MGI:3054293|PMID:15294943) MGI PMID:15294943 MGI:3054293 NCBI chr11:100,859,351...100,885,169
Ensembl chr11:100,859,351...100,885,169
JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within IGI (MGI:3054293|PMID:15294943) MGI PMID:15294943 MGI:3054293 NCBI chr11:100,780,731...100,859,004
Ensembl chr11:100,780,731...100,850,724
JBrowse link
G Syk spleen tyrosine kinase acts_upstream_of_or_within IMP (MGI:77314|PMID:7477352)
(MGI:83585|PMID:8790395)
MGI PMID:7477352 PMID:8790395 MGI:77314 MGI:83585 NCBI chr13:52,582,610...52,648,792
Ensembl chr13:52,583,173...52,648,792
JBrowse link
regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr3 early growth response 3 acts_upstream_of_or_within IDA (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chr14:70,077,317...70,082,613
Ensembl chr14:70,077,203...70,082,614
JBrowse link
G Rorc RAR-related orphan receptor gamma acts_upstream_of_or_within IDA (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chr 3:94,372,794...94,398,276
Ensembl chr 3:94,372,794...94,398,276
JBrowse link
G Sox13 SRY (sex determining region Y)-box 13 acts_upstream_of_or_within IDA (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chr 1:133,382,300...133,424,459
Ensembl chr 1:133,382,303...133,424,377
JBrowse link
G Tcf7 transcription factor 7, T cell specific involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr11:52,246,527...52,283,383
Ensembl chr11:52,252,371...52,283,331
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28578
    immune system process 3083
      leukocyte activation 1136
        lymphocyte activation 934
          T cell activation 559
            gamma-delta T cell activation 23
              gamma-delta T cell activation involved in immune response + 0
              gamma-delta T cell differentiation + 19
              gamma-delta T cell proliferation + 0
              negative regulation of gamma-delta T cell activation + 0
              positive regulation of gamma-delta T cell activation + 11
              regulation of gamma-delta T cell activation + 14
Path 2
Term Annotations click to browse term
  biological_process 28578
    cellular process 17544
      cell activation 1271
        leukocyte activation 1136
          lymphocyte activation 934
            T cell activation 559
              gamma-delta T cell activation 23
                gamma-delta T cell activation involved in immune response + 0
                gamma-delta T cell differentiation + 19
                gamma-delta T cell proliferation + 0
                negative regulation of gamma-delta T cell activation + 0
                positive regulation of gamma-delta T cell activation + 11
                regulation of gamma-delta T cell activation + 14
paths to the root