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ONTOLOGY REPORT - ANNOTATIONS

Term:gamma-delta T cell activation
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Accession:GO:0046629 term browser browse the term
Definition:The change in morphology and behavior of a gamma-delta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
Synonyms:exact_synonym: gamma-delta T lymphocyte activation


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gamma-delta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxadr coxsackie virus and adenovirus receptor involved_in IDA (MGI:4822257|PMID:20813954) UniProt PMID:20813954 MGI:4822257 NCBI chr16:78,098,114...78,156,673
Ensembl chr16:78,098,377...78,156,662 		JBrowse link
G Itk IL2 inducible T cell kinase involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr11:46,215,975...46,280,342
Ensembl chr11:46,215,977...46,280,342 		JBrowse link
G Jaml junction adhesion molecule like involved_in IDA (MGI:4822257|PMID:20813954) UniProt PMID:20813954 MGI:4822257 NCBI chr 9:44,990,451...45,019,829
Ensembl chr 9:44,990,481...45,019,832 		JBrowse link
G Mill2 MHC I like leukocyte 2 involved_in ISO (PMID:9497295) UniProt PMID:9497295 NCBI chr 7:18,573,878...18,603,621
Ensembl chr 7:18,573,891...18,599,327 		JBrowse link
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr9 C-C motif chemokine receptor 9 acts_upstream_of_or_within IMP (MGI:5629467|PMID:25348153) MGI PMID:25348153 MGI:5629467 NCBI chr 9:123,596,276...123,612,522
Ensembl chr 9:123,507,504...123,613,395 		JBrowse link
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within IDA
IMP		 (MGI:5629467|PMID:25348153) MGI PMID:25348153 MGI:5629467 NCBI chr14:122,148,846...122,153,300
Ensembl chr14:122,148,665...122,153,193 		JBrowse link
G Klrc1 killer cell lectin-like receptor subfamily C, member 1 involved_in ISO (PMID:18064301) UniProt PMID:18064301 NCBI chr 6:129,642,978...129,659,815
Ensembl chr 6:129,642,978...129,655,936 		JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged 2 involved_in IMP (MGI:1342169|PMID:10383933) UniProt PMID:10383933 MGI:1342169 NCBI chr12:112,871,439...112,893,437
Ensembl chr12:112,871,439...112,893,396 		JBrowse link
G Lck lymphocyte protein tyrosine kinase acts_upstream_of IMP (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chr 4:129,442,142...129,467,415
Ensembl chr 4:129,442,137...129,467,434 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of IMP (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chr 1:137,990,597...138,103,491
Ensembl chr 1:137,990,599...138,103,446 		JBrowse link
G Skint1 selection and upkeep of intraepithelial T cells 1 acts_upstream_of IDA (MGI:4940419|PMID:21300860) MGI PMID:21300860 MGI:4940419 NCBI chr 4:111,863,466...111,886,735
Ensembl chr 4:111,863,466...111,886,735 		JBrowse link
G Sox13 SRY (sex determining region Y)-box 13 involved_in IMP (MGI:3695974|PMID:17218525), (MGI:6276541|PMID:30413363) UniProt PMID:17218525 PMID:30413363 MGI:3695974 MGI:6276541 NCBI chr 1:133,310,038...133,352,198
Ensembl chr 1:133,310,041...133,352,115 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of IGI (MGI:3054293|PMID:15294943) MGI PMID:15294943 MGI:3054293 NCBI chr11:100,750,177...100,775,995
Ensembl chr11:100,750,177...100,775,995 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of IGI (MGI:3054293|PMID:15294943) MGI PMID:15294943 MGI:3054293 NCBI chr11:100,671,557...100,741,407
Ensembl chr11:100,671,557...100,741,550 		JBrowse link
G Syk spleen tyrosine kinase acts_upstream_of IMP (MGI:83585|PMID:8790395)
(MGI:77314|PMID:7477352)		 MGI PMID:7477352 PMID:8790395 MGI:77314 MGI:83585 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828 		JBrowse link
G Tcf7 transcription factor 7, T cell specific involved_in IMP (MGI:6276541|PMID:30413363) UniProt PMID:30413363 MGI:6276541 NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158 		JBrowse link
gamma-delta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scart2 scavenger receptor family member expressed on T cells 2 acts_upstream_of_or_within IDA (MGI:3803061|PMID:18641307) MGI PMID:18641307 MGI:3803061 NCBI chr 7:139,827,192...139,880,647
Ensembl chr 7:139,827,197...139,880,649 		JBrowse link
gamma-delta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase acts_upstream_of IMP (MGI:7437433|PMID:35939687) UniProt PMID:35939687 MGI:7437433 NCBI chr11:60,428,509...60,449,338
Ensembl chr11:60,427,207...60,449,338 		JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gimap3 GTPase, IMAP family member 3 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:48,741,398...48,747,785
Ensembl chr 6:48,741,398...48,747,785 		JBrowse link
G Gimap5 GTPase, IMAP family member 5 involved_in ISO RGD
MGI		 PMID:11859104 GO_REF:0000096 MGI:4417868 RGD:625608 NCBI chr 6:48,723,131...48,731,134
Ensembl chr 6:48,723,131...48,731,144 		JBrowse link
G Lck lymphocyte protein tyrosine kinase acts_upstream_of_or_within IMP (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chr 4:129,442,142...129,467,415
Ensembl chr 4:129,442,137...129,467,434 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in IMP (MGI:3818191|PMID:19015308) UniProt PMID:19015308 MGI:3818191 NCBI chr15:103,362,219...103,411,288
Ensembl chr15:103,362,221...103,407,237 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within IMP (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chr 1:137,990,597...138,103,491
Ensembl chr 1:137,990,599...138,103,446 		JBrowse link
G Skint1 selection and upkeep of intraepithelial T cells 1 acts_upstream_of_or_within IDA (MGI:4940419|PMID:21300860) MGI PMID:21300860 MGI:4940419 NCBI chr 4:111,863,466...111,886,735
Ensembl chr 4:111,863,466...111,886,735 		JBrowse link
G Sox13 SRY (sex determining region Y)-box 13 involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr 1:133,310,038...133,352,198
Ensembl chr 1:133,310,041...133,352,115 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within IGI (MGI:3054293|PMID:15294943) MGI PMID:15294943 MGI:3054293 NCBI chr11:100,750,177...100,775,995
Ensembl chr11:100,750,177...100,775,995 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within IGI (MGI:3054293|PMID:15294943) MGI PMID:15294943 MGI:3054293 NCBI chr11:100,671,557...100,741,407
Ensembl chr11:100,671,557...100,741,550 		JBrowse link
G Syk spleen tyrosine kinase acts_upstream_of_or_within IMP (MGI:77314|PMID:7477352)
(MGI:83585|PMID:8790395)		 MGI PMID:7477352 PMID:8790395 MGI:77314 MGI:83585 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828 		JBrowse link
regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr3 early growth response 3 acts_upstream_of_or_within IDA (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chr14:70,314,766...70,320,062
Ensembl chr14:70,314,652...70,320,063 		JBrowse link
G Rorc RAR-related orphan receptor gamma acts_upstream_of_or_within IDA (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chr 3:94,280,101...94,305,583
Ensembl chr 3:94,280,101...94,305,583 		JBrowse link
G Sox13 SRY (sex determining region Y)-box 13 acts_upstream_of_or_within IDA (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chr 1:133,310,038...133,352,198
Ensembl chr 1:133,310,041...133,352,115 		JBrowse link
G Tcf7 transcription factor 7, T cell specific involved_in IMP (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28698
    immune system process 3087
      leukocyte activation 1158
        lymphocyte activation 950
          T cell activation 683
            gamma-delta T cell activation 25
              gamma-delta T cell activation involved in immune response + 0
              gamma-delta T cell differentiation + 20
              gamma-delta T cell proliferation + 1
              negative regulation of gamma-delta T cell activation + 0
              positive regulation of gamma-delta T cell activation + 12
              regulation of gamma-delta T cell activation + 15
Path 2
Term Annotations click to browse term
  biological_process 28698
    cellular process 17677
      cell activation 1306
        leukocyte activation 1158
          lymphocyte activation 950
            T cell activation 683
              gamma-delta T cell activation 25
                gamma-delta T cell activation involved in immune response + 0
                gamma-delta T cell differentiation + 20
                gamma-delta T cell proliferation + 1
                negative regulation of gamma-delta T cell activation + 0
                positive regulation of gamma-delta T cell activation + 12
                regulation of gamma-delta T cell activation + 15
paths to the root