Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Community Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:gamma-delta T cell activation
go back to main search page
Accession:GO:0046629 term browser browse the term
Definition:The change in morphology and behavior of a gamma-delta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
Synonyms:exact_synonym: gamma-delta T lymphocyte activation


show annotations for term's descendants           Sort by:
gamma-delta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD247 CD247 molecule involved_in NAS (PMID:30976362) ComplexPortal PMID:30976362 NCBI chr 1:167,430,640...167,518,529
Ensembl chr 1:167,425,027...167,518,640 		JBrowse link
G CD3E CD3 epsilon subunit of T-cell receptor complex involved_in NAS (PMID:30976362) ComplexPortal PMID:30976362 NCBI chr11:118,304,730...118,316,173
Ensembl chr11:118,304,730...118,316,175 		JBrowse link
G CD3G CD3 gamma subunit of T-cell receptor complex involved_in NAS (PMID:30976362) ComplexPortal PMID:30976362 NCBI chr11:118,344,344...118,355,161
Ensembl chr11:118,344,344...118,355,161 		JBrowse link
G CXADR CXADR Ig-like cell adhesion molecule involved_in ISS UniProt GO_REF:0000024 NCBI chr21:17,513,043...17,636,262
Ensembl chr21:17,513,043...17,593,579 		JBrowse link
G ITK IL2 inducible T cell kinase involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:157,180,840...157,255,185
Ensembl chr 5:157,142,933...157,255,185 		JBrowse link
G JAML junction adhesion molecule like involved_in ISS UniProt GO_REF:0000024 NCBI chr11:118,193,725...118,225,011
Ensembl chr11:118,193,725...118,225,092 		JBrowse link
G MICA MHC class I polypeptide-related sequence A involved_in IDA (PMID:9497295) UniProt PMID:9497295 NCBI chr 6:31,400,711...31,415,315
Ensembl chr 6:31,399,784...31,415,315 		JBrowse link
G MICB MHC class I polypeptide-related sequence B involved_in IDA (PMID:9497295) UniProt PMID:9497295 NCBI chr 6:31,494,918...31,511,124
Ensembl chr 6:31,494,881...31,511,124 		JBrowse link
G TRDC T cell receptor delta constant involved_in NAS (PMID:30976362) ComplexPortal PMID:30976362 NCBI chr14:22,462,932...22,466,577
Ensembl chr14:22,462,932...22,465,787 		JBrowse link
G TRGC1 T cell receptor gamma constant 1 involved_in NAS (PMID:30976362) ComplexPortal PMID:30976362 NCBI chr 7:38,260,088...38,265,678 JBrowse link
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR9 C-C motif chemokine receptor 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5629467|PMID:25348153) MGI
Ensembl		 PMID:25348153 GO_REF:0000107 MGI:5629467 NCBI chr 3:45,886,064...45,903,174
Ensembl chr 3:45,884,425...45,903,174 		JBrowse link
G GPR18 G protein-coupled receptor 18 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5629467|PMID:25348153) MGI
Ensembl		 PMID:25348153 GO_REF:0000107 MGI:5629467 NCBI chr13:99,254,739...99,258,379
Ensembl chr13:99,254,732...99,261,744 		JBrowse link
G KLRC1 killer cell lectin like receptor C1 involved_in IDA (PMID:18064301) UniProt PMID:18064301 NCBI chr12:10,442,264...10,454,685
Ensembl chr12:10,442,264...10,454,685 		JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG2 jagged canonical Notch ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:105,140,995...105,168,776
Ensembl chr14:105,140,982...105,168,824 		JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of ISO (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chr 1:32,251,265...32,286,165
Ensembl chr 1:32,251,244...32,286,165 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of
involved_in		 ISO
IEA		 (MGI:70338|PMID:7807014) MGI
Ensembl		 PMID:7807014 GO_REF:0000107 MGI:70338 NCBI chr 1:198,638,713...198,757,476
Ensembl chr 1:198,638,457...198,757,476 		JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:204,073,115...204,127,743
Ensembl chr 1:204,073,115...204,127,743 		JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of ISO (MGI:3054293|PMID:15294943) MGI PMID:15294943 MGI:3054293 NCBI chr17:42,287,439...42,311,943
Ensembl chr17:42,287,547...42,311,943 		JBrowse link
G STAT5B signal transducer and activator of transcription 5B acts_upstream_of
involved_in		 ISO
IEA		 (MGI:3054293|PMID:15294943) MGI
Ensembl		 PMID:15294943 GO_REF:0000107 MGI:3054293 NCBI chr17:42,199,177...42,288,370
Ensembl chr17:42,199,176...42,288,633 		JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of
involved_in		 ISO
IEA		 (MGI:83585|PMID:8790395)
(MGI:77314|PMID:7477352)		 MGI
Ensembl		 PMID:7477352 PMID:8790395 GO_REF:0000107 MGI:77314 MGI:83585 NCBI chr 9:90,801,600...90,898,549
Ensembl chr 9:90,801,787...90,898,549 		JBrowse link
G TCF7 transcription factor 7 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:134,108,218...134,148,210
Ensembl chr 5:134,114,681...134,151,865 		JBrowse link
gamma-delta T cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH5 alkB homolog 5, RNA demethylase involved_in
acts_upstream_of		 IEA
ISO		 (MGI:7437433|PMID:35939687) Ensembl
UniProt		 PMID:35939687 GO_REF:0000107 MGI:7437433 NCBI chr17:18,183,828...18,209,954
Ensembl chr17:18,183,078...18,209,954 		JBrowse link
positive regulation of gamma-delta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077 		JBrowse link
positive regulation of gamma-delta T cell activation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LILRB1 leukocyte immunoglobulin like receptor B1 involved_in IDA (PMID:21233315) UniProt PMID:21233315 NCBI chr19:54,616,322...54,638,022
Ensembl chr19:54,617,158...54,638,022 		JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GIMAP5 GTPase, IMAP family member 5 ISO RGD PMID:11859104 RGD:625608 NCBI chr 7:150,737,418...150,743,646
Ensembl chr 7:150,722,253...150,750,033 		JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chr 1:32,251,265...32,286,165
Ensembl chr 1:32,251,244...32,286,165 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956 		JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:54,497,752...54,548,243
Ensembl chr12:54,497,752...54,548,243 		JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:70338|PMID:7807014) MGI
Ensembl		 PMID:7807014 GO_REF:0000107 MGI:70338 NCBI chr 1:198,638,713...198,757,476
Ensembl chr 1:198,638,457...198,757,476 		JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:204,073,115...204,127,743
Ensembl chr 1:204,073,115...204,127,743 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:21,593,751...21,598,619
Ensembl chr 6:21,593,751...21,598,619 		JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (MGI:3054293|PMID:15294943) MGI PMID:15294943 MGI:3054293 NCBI chr17:42,287,439...42,311,943
Ensembl chr17:42,287,547...42,311,943 		JBrowse link
G STAT5B signal transducer and activator of transcription 5B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3054293|PMID:15294943) MGI
Ensembl		 PMID:15294943 GO_REF:0000107 MGI:3054293 NCBI chr17:42,199,177...42,288,370
Ensembl chr17:42,199,176...42,288,633 		JBrowse link
G SYK spleen associated tyrosine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:83585|PMID:8790395)
(MGI:77314|PMID:7477352)		 MGI
Ensembl		 PMID:7477352 PMID:8790395 GO_REF:0000107 MGI:77314 MGI:83585 NCBI chr 9:90,801,600...90,898,549
Ensembl chr 9:90,801,787...90,898,549 		JBrowse link
regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR3 early growth response 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5139961|PMID:21737317) MGI
Ensembl		 PMID:21737317 GO_REF:0000107 MGI:5139961 NCBI chr 8:22,687,659...22,693,480
Ensembl chr 8:22,687,659...22,693,480 		JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chr 1:151,806,071...151,831,802
Ensembl chr 1:151,806,071...151,831,845 		JBrowse link
G SOX13 SRY-box transcription factor 13 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5139961|PMID:21737317) MGI
Ensembl		 PMID:21737317 GO_REF:0000107 MGI:5139961 NCBI chr 1:204,073,115...204,127,743
Ensembl chr 1:204,073,115...204,127,743 		JBrowse link
G TCF7 transcription factor 7 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:134,108,218...134,148,210
Ensembl chr 5:134,114,681...134,151,865 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19567
    immune system process 3145
      leukocyte activation 1122
        lymphocyte activation 920
          T cell activation 654
            gamma-delta T cell activation 30
              gamma-delta T cell activation involved in immune response + 1
              gamma-delta T cell differentiation + 17
              gamma-delta T cell proliferation + 1
              negative regulation of gamma-delta T cell activation + 0
              positive regulation of gamma-delta T cell activation + 12
              regulation of gamma-delta T cell activation + 15
Path 2
Term Annotations click to browse term
  biological_process 19567
    cellular process 18201
      cell activation 1291
        leukocyte activation 1122
          lymphocyte activation 920
            T cell activation 654
              gamma-delta T cell activation 30
                gamma-delta T cell activation involved in immune response + 1
                gamma-delta T cell differentiation + 17
                gamma-delta T cell proliferation + 1
                negative regulation of gamma-delta T cell activation + 0
                positive regulation of gamma-delta T cell activation + 12
                regulation of gamma-delta T cell activation + 15
paths to the root