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ONTOLOGY REPORT - ANNOTATIONS


Term:gamma-delta T cell activation
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Accession:GO:0046629 term browser browse the term
Definition:The change in morphology and behavior of a gamma-delta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
Synonyms:exact_synonym: gamma-delta T lymphocyte activation


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gamma-delta T cell activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXADR CXADR Ig-like cell adhesion molecule involved_in ISO (MGI:4822257|PMID:20813954) UniProt PMID:20813954 MGI:4822257 NCBI chr31:14,021,292...14,079,049
Ensembl chr31:14,021,303...14,078,847
JBrowse link
G ITK IL2 inducible T cell kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:52,902,886...52,966,465
Ensembl chr 4:52,902,871...52,966,542
JBrowse link
G JAML junction adhesion molecule like involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:15,485,378...15,513,457
Ensembl chr 5:15,476,582...15,513,075
JBrowse link
G MICA MHC class I polypeptide-related sequence A involved_in ISO (PMID:9497295) UniProt PMID:9497295
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR9 C-C motif chemokine receptor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5629467|PMID:25348153) Ensembl
MGI
PMID:25348153 GO_REF:0000107 MGI:5629467 NCBI chr20:42,607,024...42,616,823
Ensembl chr20:42,607,024...42,616,823
JBrowse link
G GPR18 G protein-coupled receptor 18 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5629467|PMID:25348153) Ensembl
MGI
PMID:25348153 GO_REF:0000107 MGI:5629467 NCBI chr22:49,288,226...49,294,567
Ensembl chr22:49,288,343...49,289,338
JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG2 jagged canonical Notch ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,535,539...72,553,531
Ensembl chr 8:72,535,107...72,550,322
JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:702,974...721,340
Ensembl chr38:523,481...720,195
JBrowse link
G TCF7 transcription factor 7 involved_in ISO (MGI:6276541|PMID:30413363) UniProt PMID:30413363 MGI:6276541 NCBI chr11:22,313,113...22,346,221
Ensembl chr11:22,313,105...22,344,004
JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LCK LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:70338|PMID:7807014) MGI PMID:7807014 MGI:70338 NCBI chr 2:68,940,816...68,964,585
Ensembl chr 2:68,941,249...68,964,567
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019
JBrowse link
G LOC100687459 GTPase IMAP family member 5 ISO RGD PMID:11859104 RGD:625608 NCBI chr16:14,887,308...14,895,522 JBrowse link
G NCKAP1L NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:805,274...858,901
Ensembl chr27:805,310...843,439
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:70338|PMID:7807014) Ensembl
MGI
PMID:7807014 GO_REF:0000107 MGI:70338 NCBI chr 7:4,155,876...4,282,151
Ensembl chr 7:4,137,728...4,282,124
JBrowse link
G SOX13 SRY-box transcription factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:702,974...721,340
Ensembl chr38:523,481...720,195
JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:20,098,783...20,101,357
Ensembl chr35:20,099,773...20,101,154
JBrowse link
G STAT5A signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO (MGI:3054293|PMID:15294943) MGI PMID:15294943 MGI:3054293 NCBI chr 9:20,616,041...20,638,523
Ensembl chr 9:20,617,151...20,638,103
JBrowse link
G STAT5B signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3054293|PMID:15294943) Ensembl
MGI
PMID:15294943 GO_REF:0000107 MGI:3054293 NCBI chr 9:20,647,712...20,718,453
Ensembl chr 9:20,691,483...20,716,485
JBrowse link
G SYK spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:77314|PMID:7477352)
(MGI:83585|PMID:8790395)
Ensembl
MGI
PMID:7477352 PMID:8790395 GO_REF:0000107 MGI:77314 MGI:83585 NCBI chr 1:95,903,501...95,955,577
Ensembl chr 1:95,903,566...95,955,583
JBrowse link
regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR3 early growth response 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5139961|PMID:21737317) Ensembl
MGI
PMID:21737317 GO_REF:0000107 MGI:5139961 NCBI chr25:34,591,691...34,597,144
Ensembl chr25:34,591,863...34,594,346
JBrowse link
G RORC RAR related orphan receptor C acts_upstream_of_or_within ISO (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453
JBrowse link
G SOX13 SRY-box transcription factor 13 acts_upstream_of_or_within ISO (MGI:5139961|PMID:21737317) MGI PMID:21737317 MGI:5139961 NCBI chr38:702,974...721,340
Ensembl chr38:523,481...720,195
JBrowse link
G TCF7 transcription factor 7 involved_in ISO (MGI:5486619|PMID:23562159) UniProt PMID:23562159 MGI:5486619 NCBI chr11:22,313,113...22,346,221
Ensembl chr11:22,313,105...22,344,004
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16235
    immune system process 2409
      leukocyte activation 917
        lymphocyte activation 740
          T cell activation 511
            gamma-delta T cell activation 20
              gamma-delta T cell activation involved in immune response + 0
              gamma-delta T cell differentiation + 16
              gamma-delta T cell proliferation + 0
              negative regulation of gamma-delta T cell activation + 0
              positive regulation of gamma-delta T cell activation + 10
              regulation of gamma-delta T cell activation + 13
Path 2
Term Annotations click to browse term
  biological_process 16235
    cellular process 15553
      cell activation 1047
        leukocyte activation 917
          lymphocyte activation 740
            T cell activation 511
              gamma-delta T cell activation 20
                gamma-delta T cell activation involved in immune response + 0
                gamma-delta T cell differentiation + 16
                gamma-delta T cell proliferation + 0
                negative regulation of gamma-delta T cell activation + 0
                positive regulation of gamma-delta T cell activation + 10
                regulation of gamma-delta T cell activation + 13
paths to the root