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ONTOLOGY REPORT - ANNOTATIONS


Term:sphingolipid binding
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Accession:GO:0046625 term browser browse the term
Definition:Binding to a sphingolipid, a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).



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sphingolipid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cerkl ceramide kinase-like enables ISO (MGI:5571022|PMID:23501591) RGD PMID:23501591 MGI:5571022 NCBI chr 3:64,238,714...64,344,695
Ensembl chr 3:64,237,522...64,340,675
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 IPI in glomerular endothelial, but not mesangial, cells RGD PMID:15164763 RGD:2293487 NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:43,350,098...43,414,463
JBrowse link
G Phb2 prohibitin 2 enables ISO
IEA
ISS
(PMID:20959514)
GO_REF:0000107
(MGI:6294409|PMID:20959514)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20959514 GO_REF:0000024 GO_REF:0000107 MGI:6294409 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 IDA RGD PMID:9765227 RGD:1581785 NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681
JBrowse link
G Traf2 Tnf receptor-associated factor 2 enables ISO (PMID:20577214) RGD PMID:20577214 NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538
JBrowse link
ceramide 1-phosphate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cert1 ceramide transporter 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:27,882,546...27,987,090
Ensembl chr 2:27,882,555...27,987,074
JBrowse link
G Cptp ceramide-1-phosphate transfer protein enables IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:23863933)
UniProt
RGD
PMID:23863933 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:166,474,947...166,479,103
Ensembl chr 5:166,474,966...166,479,017
JBrowse link
G Gltp glycolipid transfer protein enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,907,168...41,927,321
Ensembl chr12:41,907,144...41,927,319
JBrowse link
G Pla2g4a phospholipase A2 group IVA enables ISO
ISS
(PMID:17472963)
GO_REF:0000024
RGD
UniProt
PMID:17472963 GO_REF:0000024 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Plekha8 pleckstrin homology domain containing A8 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:83,723,470...83,774,081
Ensembl chr 4:83,723,561...83,774,081
JBrowse link
ceramide binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300lf Cd300 molecule-like family member F enables ISO
ISS
(PMID:24035150)
GO_REF:0000024
(MGI:5451118|PMID:23123064)
RGD
UniProt
PMID:23123064 PMID:24035150 GO_REF:0000024 MGI:5451118 NCBI chr10:100,359,942...100,376,130
Ensembl chr10:100,359,943...100,376,041
JBrowse link
G Cert1 ceramide transporter 1 enables ISO (PMID:18184806)
(PMID:14685229)
RGD PMID:14685229 PMID:18184806 NCBI chr 2:27,882,546...27,987,090
Ensembl chr 2:27,882,555...27,987,074
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:18317235)
UniProt
RGD
PMID:18317235 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta enables ISO
ISS
(PMID:26280656)
GO_REF:0000024
RGD
UniProt
PMID:26280656 GO_REF:0000024 NCBI chr 7:65,434,525...65,477,386
Ensembl chr 7:65,434,394...65,477,383
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta enables ISO (PMID:22922758) RGD PMID:22922758 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Plekha8 pleckstrin homology domain containing A8 enables ISO
ISS
(PMID:17687330)
GO_REF:0000024
RGD
UniProt
PMID:17687330 GO_REF:0000024 NCBI chr 4:83,723,470...83,774,081
Ensembl chr 4:83,723,561...83,774,081
JBrowse link
G Pltp phospholipid transfer protein enables ISO
IBA
(PMID:9132017)
PMID:21873635
RGD PMID:9132017 PMID:21873635 RGD:13792537 NCBI chr 3:153,574,825...153,592,647
Ensembl chr 3:153,574,825...153,592,647
JBrowse link
G Vdac1 voltage-dependent anion channel 1 enables ISO (PMID:31015432) RGD PMID:31015432 NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
JBrowse link
G Vdac2 voltage-dependent anion channel 2 enables ISO
ISS
(PMID:31015432)
GO_REF:0000024
RGD
UniProt
PMID:31015432 GO_REF:0000024 NCBI chr15:2,462,877...2,476,802
Ensembl chr15:2,463,056...2,476,553
JBrowse link
ganglioside binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clip3 CAP-GLY domain containing linker protein 3 enables ISO
ISS
(PMID:20052288)
GO_REF:0000024
RGD
UniProt
PMID:20052288 GO_REF:0000024 NCBI chr 1:85,547,170...85,563,187
Ensembl chr 1:85,547,206...85,563,184
JBrowse link
ganglioside GM1 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epdr1 ependymin related 1 enables ISO (PMID:30729188) RGD PMID:30729188 NCBI chr17:45,333,677...45,358,597
Ensembl chr17:45,333,956...45,358,594
JBrowse link
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Rtn4r reticulon 4 receptor enables ISO
ISS
(PMID:18411262)
GO_REF:0000024
RGD
UniProt
PMID:18411262 GO_REF:0000024 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
ganglioside GM2 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
ganglioside GM3 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
ganglioside GP1c binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
ganglioside GT1b binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mag myelin-associated glycoprotein enables ISS
ISO
IDA
GO_REF:0000024
(MGI:5822923|PMID:27922006)
PMID:8995428
UniProt
RGD
PMID:27922006 PMID:8995428 GO_REF:0000024 MGI:5822923, RGD:12050139 NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
JBrowse link
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Rtn4r reticulon 4 receptor enables ISS
ISO
GO_REF:0000024
(PMID:18411262)
UniProt
RGD
PMID:18411262 GO_REF:0000024 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
glycosphingolipid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cel carboxyl ester lipase IDA RGD PMID:15296737 RGD:2313559 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
G Il2 interleukin 2 IDA binds gangliosides GM1, GD1a, GD1b and GT1b with increased binding as the carbohydrate side chains increase in complexity RGD PMID:6609839 RGD:1600093 NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
JBrowse link
G Lama1 laminin subunit alpha 1 enables ISO (MGI:3836888|PMID:19118221) RGD PMID:19118221 MGI:3836888 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Lamb1 laminin subunit beta 1 enables ISO (MGI:3836888|PMID:19118221) RGD PMID:19118221 MGI:3836888 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
JBrowse link
G Lamc1 laminin subunit gamma 1 enables ISO (MGI:3836888|PMID:19118221) RGD PMID:19118221 MGI:3836888 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase IPI RGD PMID:8106508 RGD:2303724 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19437
    binding 16664
      lipid binding 802
        sphingolipid binding 28
          ceramide binding + 17
          glycosphingolipid binding + 11
paths to the root