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ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor cell differentiation
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Accession:GO:0046530 term browser browse the term
Definition:The specialization of organization of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. An example of this process is found in Drosophila melanogaster.
Synonyms:alt_id: GO:0007467


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photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H ISO (MGI:5796739|PMID:26149919), (MGI:6304909|PMID:30705315) MGI PMID:26149919, PMID:30705315 MGI:5796739, MGI:6304909 NCBI chr38:2,878,677...2,956,226 JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PROM1 prominin 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 3:64,229,487...64,362,346
Ensembl chr 3:64,260,685...64,382,009
JBrowse link
G ROM1 retinal outer segment membrane protein 1 IEA Ensembl GO_REF:0000107 NCBI chr18:54,025,603...54,027,803
Ensembl chr18:54,025,606...54,027,375
JBrowse link
G SDK2 sidekick cell adhesion molecule 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:6,788,305...6,868,052
Ensembl chr 9:6,734,504...6,867,078
JBrowse link
G SLC4A7 solute carrier family 4 member 7 ISO (MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:2680888 NCBI chr23:16,710,649...16,788,277
Ensembl chr23:16,710,701...16,785,541
JBrowse link
G TTC8 tetratricopeptide repeat domain 8 IEA Ensembl GO_REF:0000107 NCBI chr 8:60,061,670...60,115,464
Ensembl chr 8:60,061,732...60,115,075
JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule ISO (MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:3807419 NCBI chr37:25,616,942...25,622,989 JBrowse link
eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 ISO (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351
JBrowse link
G CRB1 crumbs cell polarity complex component 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:5,277,394...5,490,542
Ensembl chr 7:5,277,394...5,490,470
JBrowse link
G FSCN2 fascin actin-bundling protein 2, retinal IEA Ensembl GO_REF:0000107 NCBI chr 9:616,088...622,152
Ensembl chr 9:617,609...621,882
JBrowse link
G GABRR2 gamma-aminobutyric acid type A receptor subunit rho2 NOT ISO (MGI:2179933|PMID:12019334) MGI PMID:12019334 MGI:2179933 NCBI chr12:48,492,607...48,537,961
Ensembl chr12:48,431,379...48,538,037
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 IEA Ensembl GO_REF:0000107 NCBI chr20:39,128,244...39,133,280
Ensembl chr20:39,128,244...39,133,280
JBrowse link
G GNGT1 G protein subunit gamma transducin 1 IEA Ensembl GO_REF:0000107 NCBI chr14:19,081,676...19,420,261
Ensembl chr14:19,415,510...19,420,255
JBrowse link
G MFRP membrane frizzled-related protein IEA Ensembl GO_REF:0000107 NCBI chr 5:14,555,619...14,561,577
Ensembl chr 5:14,556,065...14,561,623
JBrowse link
G NR2E3 nuclear receptor subfamily 2 group E member 3 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chr30:35,375,181...35,382,398 JBrowse link
G OLFM3 olfactomedin 3 ISO RGD PMID:12019210 RGD:633402 NCBI chr 6:48,259,403...48,453,110
Ensembl chr 6:48,259,545...48,446,363
JBrowse link
G PDGFB platelet derived growth factor subunit B ISO (MGI:5607451|PMID:25224828) MGI PMID:25224828 MGI:5607451 NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746
JBrowse link
G PRDM1 PR/SET domain 1 IEA Ensembl GO_REF:0000107 NCBI chr12:63,454,242...63,495,278
Ensembl chr12:63,470,974...63,495,579
JBrowse link
G PRKCI protein kinase C iota IEA Ensembl GO_REF:0000107 NCBI chr34:34,767,066...34,839,823
Ensembl chr34:34,766,801...34,837,605
JBrowse link
G RDH13 retinol dehydrogenase 13 IEA Ensembl GO_REF:0000107 NCBI chr 1:102,539,363...102,552,749
Ensembl chr 1:102,539,124...102,554,027
JBrowse link
G RORB RAR related orphan receptor B ISO (MGI:3652638|PMID:16574740) UniProt PMID:16574740 MGI:3652638 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061
JBrowse link
G RPGR retinitis pigmentosa GTPase regulator ISO (MGI:2654998|PMID:12651948) MGI PMID:12651948 MGI:2654998 NCBI chr  X:33,056,371...33,105,036
Ensembl chr  X:32,745,020...33,330,841
JBrowse link
G RPGRIP1 RPGR interacting protein 1 IEA InterPro GO_REF:0000002 NCBI chr15:18,316,887...18,388,724
Ensembl chr15:18,316,887...18,387,735
JBrowse link
G TH tyrosine hydroxylase IEA Ensembl GO_REF:0000107 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602
JBrowse link
G TULP1 TUB like protein 1 ISO (MGI:4397555|PMID:19218615) UniProt PMID:19218615 MGI:4397555 NCBI chr12:4,632,580...4,644,313
Ensembl chr12:4,633,098...4,645,994
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (MGI:3607459|PMID:16251428) MGI PMID:16251428 MGI:3607459 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312
JBrowse link
G PPP2R3A protein phosphatase 2 regulatory subunit B''alpha ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chr23:32,441,130...32,628,588
Ensembl chr23:32,471,921...32,626,548
JBrowse link
G STAT3 signal transducer and activator of transcription 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:20,539,660...20,614,631
Ensembl chr 9:20,539,697...20,612,672
JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTX2 orthodenticle homeobox 2 ISO (MGI:2680889|PMID:14625556) MGI PMID:14625556 MGI:2680889 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
negative regulation of eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIO3 iodothyronine deiodinase 3 ISO (MGI:4441081|PMID:20203194) MGI PMID:20203194 MGI:4441081 NCBI chr 8:69,696,779...69,698,880 JBrowse link
G THRB thyroid hormone receptor beta IEA Ensembl GO_REF:0000107 NCBI chr23:19,278,650...19,648,547
Ensembl chr23:19,277,493...19,660,283
JBrowse link
negative regulation of photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTF ciliary neurotrophic factor ISO (MGI:3045481|PMID:15207851) MGI PMID:15207851 MGI:3045481 NCBI chr18:37,758,148...37,765,698 JBrowse link
G DLX1 distal-less homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886
JBrowse link
G DLX2 distal-less homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510
JBrowse link
G NOTCH1 notch receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G SOX8 SRY-box transcription factor 8 IEA Ensembl GO_REF:0000107 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638
JBrowse link
G SOX9 SRY-box transcription factor 9 ISS UniProtKB GO_REF:0000024 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 2:85,194,640...85,218,068
Ensembl chr 2:85,176,161...85,232,920
JBrowse link
photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL3 ADP ribosylation factor like GTPase 3 IEA Ensembl GO_REF:0000107 NCBI chr28:15,152,762...15,189,043
Ensembl chr28:15,142,485...15,188,903
JBrowse link
G RP1 RP1 axonemal microtubule associated ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009
JBrowse link
G RP1L1 RP1 like 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:27,317,102...27,332,075
Ensembl chr25:27,325,658...27,330,556
JBrowse link
photoreceptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS1 Bardet-Biedl syndrome 1 IEA Ensembl GO_REF:0000107 NCBI chr18:50,816,126...50,835,354 JBrowse link
G C29H8orf37 chromosome 29 C8orf37 homolog IEA Ensembl GO_REF:0000107 NCBI chr29:39,856,910...39,869,759
Ensembl chr29:39,856,948...39,869,112
JBrowse link
G CABP4 calcium binding protein 4 IEA Ensembl GO_REF:0000107 NCBI chr18:50,014,698...50,017,854
Ensembl chr18:50,014,698...50,017,854
JBrowse link
G CDHR1 cadherin related family member 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:32,435,364...32,459,181
Ensembl chr 4:32,439,148...32,459,192
JBrowse link
G GRK1 G protein-coupled receptor kinase 1 ISO (MGI:1334014|PMID:10097103) MGI PMID:10097103 MGI:1334014 NCBI chr22:60,911,953...60,929,330
Ensembl chr22:60,911,953...60,926,146
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A IEA Ensembl GO_REF:0000107 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968
JBrowse link
G RABL2B RAB, member of RAS oncogene family like 2B IEA Ensembl GO_REF:0000107 NCBI chr10:16,555,009...16,571,207 JBrowse link
photoreceptor cell outer segment organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 ISS UniProtKB GO_REF:0000024 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO (MGI:5467890|PMID:23178122) MGI PMID:23178122 MGI:5467890 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381
JBrowse link
G CDHR1 cadherin related family member 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:32,435,364...32,459,181
Ensembl chr 4:32,439,148...32,459,192
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:58,574,552...58,641,631
Ensembl chr 2:58,574,552...58,640,812
JBrowse link
G CRB1 crumbs cell polarity complex component 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:5,277,394...5,490,542
Ensembl chr 7:5,277,394...5,490,470
JBrowse link
G IFT140 intraflagellar transport 140 ISO (MGI:5604762|PMID:24619649) MGI PMID:24619649 MGI:5604762 NCBI chr 6:39,262,887...39,308,912
Ensembl chr 6:39,295,045...39,308,758
JBrowse link
G IFT20 intraflagellar transport 20 IEA Ensembl GO_REF:0000107 NCBI chr 9:42,581,117...42,587,830
Ensembl chr 9:42,581,433...42,587,804
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A IEA Ensembl GO_REF:0000107 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968
JBrowse link
G NPHP1 nephrocystin 1 ISO (MGI:4437526|PMID:20081859) UniProt PMID:20081859 MGI:4437526 NCBI chr17:35,076,527...35,136,674
Ensembl chr17:35,076,636...35,136,425
JBrowse link
G NPHP4 nephrocystin 4 IEA Ensembl GO_REF:0000107 NCBI chr 5:59,819,236...59,936,220
Ensembl chr 5:59,814,274...59,929,386
JBrowse link
G PCARE photoreceptor cilium actin regulator IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:22,898,998...22,910,639
Ensembl chr17:22,898,998...22,910,639
JBrowse link
G PRPH2 peripherin 2 IEA Ensembl GO_REF:0000107 NCBI chr12:11,299,236...11,316,175
Ensembl chr12:11,299,236...11,316,175
JBrowse link
G ROM1 retinal outer segment membrane protein 1 IEA Ensembl GO_REF:0000107 NCBI chr18:54,025,603...54,027,803
Ensembl chr18:54,025,606...54,027,375
JBrowse link
G RP1 RP1 axonemal microtubule associated ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009
JBrowse link
G TMEM67 transmembrane protein 67 ISO RGD PMID:23516626 RGD:11535084 NCBI chr29:38,655,531...38,715,774
Ensembl chr29:38,654,733...38,720,559
JBrowse link
positive regulation of photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRX cone-rod homeobox ISO RGD PMID:16799048 RGD:1600973 NCBI chr 1:108,249,911...108,261,015
Ensembl chr 1:108,249,911...108,261,010
JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:9236238 RGD:2306313 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
regulation of eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGAP35 Rho GTPase activating protein 35 NAS (PMID:12234678) UniProtKB PMID:12234678 NCBI chr 1:108,952,836...109,034,329
Ensembl chr 1:108,952,562...109,034,337
JBrowse link
retinal cone cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 ISO (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351
JBrowse link
G CABP4 calcium binding protein 4 IEA Ensembl GO_REF:0000107 NCBI chr18:50,014,698...50,017,854
Ensembl chr18:50,014,698...50,017,854
JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chr10:44,232,716...44,278,555
Ensembl chr10:44,234,004...44,260,746
JBrowse link
G DIO3 iodothyronine deiodinase 3 ISO (MGI:4441081|PMID:20203194) MGI PMID:20203194 MGI:4441081 NCBI chr 8:69,696,779...69,698,880 JBrowse link
G GNAT2 G protein subunit alpha transducin 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:42,259,404...42,271,197
Ensembl chr 6:42,259,702...42,268,082
JBrowse link
G HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:64,777,069...65,162,603
Ensembl chr 4:64,775,577...65,160,444
JBrowse link
G MIR124-1 microRNA mir-124-1 ISO (MGI:5303045|PMID:21857657) MGI PMID:21857657 MGI:5303045 NCBI chr25:28,188,264...28,188,322
Ensembl chr25:28,188,250...28,188,334
JBrowse link
G MIR124-2 microRNA mir-124-2 ISO (MGI:5303045|PMID:21857657) MGI PMID:21857657 MGI:5303045 NCBI chr29:14,264,389...14,264,445 JBrowse link
G MIR183 microRNA mir-183 ISO (MGI:5469752|PMID:23341629) MGI PMID:23341629 MGI:5469752 NCBI chr14:7,068,542...7,068,603
Ensembl chr14:7,068,519...7,068,625
JBrowse link
G MIR96 microRNA mir-96 ISO (MGI:5469752|PMID:23341629) MGI PMID:23341629 MGI:5469752 NCBI chr14:7,068,754...7,068,842
Ensembl chr14:7,068,754...7,068,842
JBrowse link
G PDE6C phosphodiesterase 6C IEA Ensembl GO_REF:0000107 NCBI chr28:7,839,604...7,887,827
Ensembl chr28:7,839,847...7,887,776
JBrowse link
G RORB RAR related orphan receptor B IEA Ensembl GO_REF:0000107 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061
JBrowse link
G RP1 RP1 axonemal microtubule associated IEA
ISS
Ensembl
UniProtKB
GO_REF:0000024, GO_REF:0000107 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009
JBrowse link
G THRB thyroid hormone receptor beta IEA Ensembl GO_REF:0000107 NCBI chr23:19,278,650...19,648,547
Ensembl chr23:19,277,493...19,660,283
JBrowse link
G THY1 Thy-1 cell surface antigen IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:14,503,902...14,509,113
Ensembl chr 5:14,503,902...14,509,113
JBrowse link
G USH1C USH1 protein network component harmonin IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:40,055,786...40,100,685
Ensembl chr21:40,055,730...40,101,430
JBrowse link
retinal rod cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 ISO (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351
JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein ISO (MGI:3588454|PMID:16000322) MGI PMID:16000322 MGI:3588454 NCBI chr17:49,301,397...49,513,729
Ensembl chr17:49,301,606...49,513,625
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO (MGI:3044824|PMID:15173597) MGI PMID:15173597 MGI:3044824 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381
JBrowse link
G BHLHE23 basic helix-loop-helix family member e23 ISO (MGI:3814679|PMID:17255172) MGI PMID:17255172 MGI:3814679 NCBI chr24:46,791,368...46,792,019 JBrowse link
G CCDC66 coiled-coil domain containing 66 ISO (MGI:5141557|PMID:21680557) MGI PMID:21680557 MGI:5141557 NCBI chr20:33,714,224...33,758,846
Ensembl chr20:33,714,224...33,758,799
JBrowse link
G CFH complement factor H ISO (MGI:3760334|PMID:17921253) MGI PMID:17921253 MGI:3760334 NCBI chr38:2,878,677...2,956,226 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase IEA Ensembl GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056
JBrowse link
G NRL neural retina leucine zipper IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:4,086,487...4,090,373
Ensembl chr 8:4,086,508...4,089,216
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:74,447,927...74,777,910
Ensembl chr 1:74,449,060...74,777,032
JBrowse link
G RORB RAR related orphan receptor B IEA Ensembl GO_REF:0000107 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061
JBrowse link
G RP1 RP1 axonemal microtubule associated IEA
ISS
Ensembl
UniProtKB
GO_REF:0000024, GO_REF:0000107 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009
JBrowse link
G RPGRIP1 RPGR interacting protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:18,316,887...18,388,724
Ensembl chr15:18,316,887...18,387,735
JBrowse link
G TRPM1 transient receptor potential cation channel subfamily M member 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:37,860,730...37,949,108
Ensembl chr 3:37,817,339...37,949,108
JBrowse link
retinal rod cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTN pleiotrophin ISO RGD PMID:16914133 RGD:9831439 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814
JBrowse link
G SOX8 SRY-box transcription factor 8 IEA Ensembl GO_REF:0000107 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638
JBrowse link
G SOX9 SRY-box transcription factor 9 ISS UniProtKB GO_REF:0000024 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
retinal rod cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 2:85,194,640...85,218,068
Ensembl chr 2:85,176,161...85,232,920
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16190
    cellular process 15467
      cellular developmental process 4137
        cell differentiation 4043
          neuron differentiation 1555
            photoreceptor cell differentiation 79
              eye photoreceptor cell differentiation + 57
              negative regulation of photoreceptor cell differentiation + 7
              ocellus photoreceptor cell differentiation + 0
              photoreceptor cell development + 60
              photoreceptor cell fate commitment + 3
              positive regulation of photoreceptor cell differentiation + 2
              regulation of photoreceptor cell differentiation + 12
Path 2
Term Annotations click to browse term
  biological_process 16190
    developmental process 6310
      anatomical structure development 5858
        multicellular organism development 5351
          system development 4984
            nervous system development 2586
              neurogenesis 1855
                generation of neurons 1707
                  neuron differentiation 1555
                    photoreceptor cell differentiation 79
                      eye photoreceptor cell differentiation + 57
                      negative regulation of photoreceptor cell differentiation + 7
                      ocellus photoreceptor cell differentiation + 0
                      photoreceptor cell development + 60
                      photoreceptor cell fate commitment + 3
                      positive regulation of photoreceptor cell differentiation + 2
                      regulation of photoreceptor cell differentiation + 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.