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ONTOLOGY REPORT - ANNOTATIONS

Term:photoreceptor cell differentiation
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Accession:GO:0046530 term browser browse the term
Definition:The specialization of organization of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. An example of this process is found in Drosophila melanogaster.
Synonyms:alt_id: GO:0007467


show annotations for term's descendants           Sort by:
photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:73,862,775...73,867,377
Ensembl chr12:76,713,028...76,716,956 		JBrowse link
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:26149919), (PMID:30705315) MGI PMID:26149919 PMID:30705315 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521 		JBrowse link
G ELP6 elongator acetyltransferase complex subunit 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:47,392,777...47,415,830
Ensembl chr 3:48,496,874...48,515,090 		JBrowse link
G EPG5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:39,129,678...39,250,418
Ensembl chr18:42,669,223...42,788,788 		JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PROM1 prominin 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:10,405,299...10,519,518
Ensembl chr 4:15,702,159...15,815,454 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:57,970,290...57,972,658
Ensembl chr11:61,324,900...61,327,278 		JBrowse link
G SDK2 sidekick cell adhesion molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:67,261,847...67,577,568
Ensembl chr17:72,823,709...73,133,952 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr 3:27,261,155...27,373,223
Ensembl chr 3:27,591,639...27,670,815 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:69,446,355...69,502,351
Ensembl chr14:88,802,812...88,857,055 		JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506 		JBrowse link
eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISO (PMID:20081859) CACAO PMID:20081859 NCBI chr 6:133,055,026...133,273,591
Ensembl chr 6:137,156,237...137,361,232 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:172,794,523...173,076,045
Ensembl chr 1:177,174,431...177,422,867 		JBrowse link
G DZANK1 double zinc ribbon and ankyrin repeat domains 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:18,345,187...18,429,142
Ensembl chr20:18,317,912...18,398,939 		JBrowse link
G FSCN2 fascin actin-bundling protein 2, retinal acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:75,974,971...75,993,275
Ensembl chr17:81,687,051...81,694,823 		JBrowse link
G GABRR2 gamma-aminobutyric acid type A receptor subunit rho2 NOT|acts_upstream_of_or_within ISO (PMID:12019334) MGI PMID:12019334 NCBI chr 6:87,123,527...87,185,547
Ensembl chr 6:90,401,811...90,459,468 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568 		JBrowse link
G GNGT1 G protein subunit gamma transducin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:85,839,639...85,859,844
Ensembl chr 7:99,446,623...99,451,185 		JBrowse link
G MFRP membrane frizzled-related protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:114,179,998...114,187,716
Ensembl chr11:118,107,317...118,115,050 		JBrowse link
G NR2E3 nuclear receptor subfamily 2 group E member 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:50,759,707...50,767,703
Ensembl chr15:69,525,351...69,533,034 		JBrowse link
G OLFM3 olfactomedin 3 ISO RGD PMID:12019210 RGD:633402 NCBI chr 1:104,451,488...104,651,208
Ensembl chr 1:103,168,819...103,364,306 		JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:25224828) MGI PMID:25224828 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883 		JBrowse link
G POC5 POC5 centriolar protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:39,587,659...39,631,472
Ensembl chr 5:40,205,697...40,244,182 		JBrowse link
G PRDM1 PR/SET domain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:103,899,410...103,923,389
Ensembl chr 6:107,773,229...107,796,815 		JBrowse link
G PRKCI protein kinase C iota acts_upstream_of_or_within ISO (PMID:16267237) MGI PMID:16267237 NCBI chr 3:167,237,093...167,320,522
Ensembl chr 3:175,426,774...175,510,072 		JBrowse link
G RDH13 retinol dehydrogenase 13 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:52,081,674...52,107,781
Ensembl chr19:60,776,114...60,794,267 		JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030 		JBrowse link
G RPGR retinitis pigmentosa GTPase regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:30,718,669...30,777,671 JBrowse link
G RPGRIP1 RPGR interacting protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:2,105,703...2,169,362
Ensembl chr14:20,185,236...20,247,064 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433 		JBrowse link
G TULP1 TUB like protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,058,422...35,073,472
Ensembl chr 6:36,151,747...36,166,160 		JBrowse link
G VEGFA vascular endothelial growth factor A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353 		JBrowse link
eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP2R3A protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chr 3:133,017,166...133,202,163
Ensembl chr 3:140,485,925...140,666,592 		JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:14625556) MGI PMID:14625556 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012 		JBrowse link
negative regulation of photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTF ciliary neurotrophic factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:53,876,081...53,882,870
Ensembl chr11:57,336,792...57,341,121 		JBrowse link
G DLX1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chr17:66,028,737...66,034,122 JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 1:9,396,936...9,557,100
Ensembl chr 1:10,622,519...10,677,091 		JBrowse link
photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL3 ARF like GTPase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:99,271,620...99,312,784
Ensembl chr10:102,735,325...102,775,849 		JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:16,988,340...17,342,911
Ensembl chr13:35,425,382...35,768,935 		JBrowse link
G DCX doublecortin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:100,411,871...100,529,833
Ensembl chr  X:110,875,032...110,988,582 		JBrowse link
G FAM151B family with sequence similarity 151 member B involved_in ISO (PMID:31949211) UniProt PMID:31949211 NCBI chr 5:34,775,157...34,829,828
Ensembl chr 5:35,049,564...35,103,071 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:50,979,412...51,311,431
Ensembl chr 8:48,419,033...48,583,879
Ensembl chr 8:48,419,033...48,583,879 		JBrowse link
G RP1L1 RP1 like 1 involved_in ISO (PMID:19657028) UniProt PMID:19657028 NCBI chr 8:8,586,410...8,605,275 JBrowse link
G TUG1 taurine up-regulated 1 acts_upstream_of_or_within ISO (PMID:15797018) MGI PMID:15797018
photoreceptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:61,868,257...61,892,473
Ensembl chr11:65,192,355...65,216,274 		JBrowse link
G CABP4 calcium binding protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:62,813,477...62,820,425
Ensembl chr11:66,121,992...66,128,758 		JBrowse link
G CDHR1 cadherin related family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:80,610,079...80,632,084
Ensembl chr10:84,179,704...84,204,747 		JBrowse link
G CFAP418 cilia and flagella associated protein 418 involved_in ISO (PMID:29440555) UniProt PMID:29440555 NCBI chr 8:91,862,207...91,887,127
Ensembl chr 8:94,062,122...94,086,565 		JBrowse link
G GRK1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within ISO (PMID:10097103) MGI PMID:10097103 NCBI chr13:94,816,045...94,838,509
Ensembl chr13:113,867,002...113,885,610 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438 		JBrowse link
G RABL2B RAB, member of RAS oncogene family like 2B involved_in ISO (PMID:28625565) UniProt PMID:28625565 NCBI chr22:31,007,409...31,023,281 JBrowse link
photoreceptor cell outer segment organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:20592197)
(PMID:20081859)		 MGI
UniProt		 PMID:20081859 PMID:20592197 NCBI chr 6:133,055,026...133,273,591
Ensembl chr 6:137,156,237...137,361,232 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G CDHR1 cadherin related family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:80,610,079...80,632,084
Ensembl chr10:84,179,704...84,204,747 		JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:38,160,056...38,249,474
Ensembl chr16:57,292,093...57,375,460 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:172,794,523...173,076,045
Ensembl chr 1:177,174,431...177,422,867 		JBrowse link
G IFT140 intraflagellar transport 140 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:130,150...232,369
Ensembl chr16:1,566,824...1,658,884 		JBrowse link
G IFT20 intraflagellar transport 20 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:28,438,960...28,446,113
Ensembl chr17:28,941,303...28,948,129 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438 		JBrowse link
G NPHP1 nephrocystin 1 involved_in ISO (PMID:20081859) UniProt PMID:20081859 NCBI chr2A:91,520,612...91,602,187
Ensembl chr2A:111,625,267...111,706,205 		JBrowse link
G NPHP4 nephrocystin 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:4,620,593...4,756,363
Ensembl chr 1:5,878,739...6,012,864 		JBrowse link
G PCARE photoreceptor cilium actin regulator involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:29,069,651...29,082,796
Ensembl chr2A:29,147,730...29,160,296 		JBrowse link
G PRPH2 peripherin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:42,284,818...42,316,150
Ensembl chr 6:43,582,317...43,608,011 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:57,970,290...57,972,658
Ensembl chr11:61,324,900...61,327,278 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:50,979,412...51,311,431
Ensembl chr 8:48,419,033...48,583,879
Ensembl chr 8:48,419,033...48,583,879 		JBrowse link
G TMEM67 transmembrane protein 67 ISO RGD PMID:23516626 RGD:11535084 NCBI chr 8:90,378,623...90,442,904
Ensembl chr 8:92,324,402...92,387,437 		JBrowse link
positive regulation of photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRX cone-rod homeobox ISO RGD PMID:16799048 RGD:1600973 NCBI chr19:44,828,119...44,856,284 JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:9236238 RGD:2306313 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
retinal cone cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISO (PMID:20081859) CACAO PMID:20081859 NCBI chr 6:133,055,026...133,273,591
Ensembl chr 6:137,156,237...137,361,232 		JBrowse link
G CABP4 calcium binding protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:62,813,477...62,820,425
Ensembl chr11:66,121,992...66,128,758 		JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr2A:100,911,053...100,962,278
Ensembl chr2A:99,259,808...99,308,517 		JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:94,473,423...94,511,285
Ensembl chr 9:123,011,968...123,032,855 		JBrowse link
G DIO3 iodothyronine deiodinase 3 acts_upstream_of_or_within ISO (PMID:20203194) MGI PMID:20203194 NCBI chr14:82,188,126...82,190,220 JBrowse link
G GNAT2 G protein subunit alpha transducin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808 		JBrowse link
G HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:64,673,392...65,116,259
Ensembl chr 5:69,724,767...70,158,761 		JBrowse link
G PDE6C phosphodiesterase 6C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:90,361,003...90,414,169
Ensembl chr10:93,871,704...93,924,654 		JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:50,979,412...51,311,431
Ensembl chr 8:48,419,033...48,583,879
Ensembl chr 8:48,419,033...48,583,879 		JBrowse link
G THRB thyroid hormone receptor beta acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 3:24,024,025...24,401,024
Ensembl chr 3:24,346,824...24,564,960 		JBrowse link
G THY1 Thy-1 cell surface antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:114,253,535...114,259,495
Ensembl chr11:118,180,717...118,186,901 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:17,548,501...17,598,923
Ensembl chr11:17,233,854...17,284,256 		JBrowse link
retinal cone cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:73,862,775...73,867,377
Ensembl chr12:76,713,028...76,716,956 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
retinal rod cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISO (PMID:20081859) CACAO PMID:20081859 NCBI chr 6:133,055,026...133,273,591
Ensembl chr 6:137,156,237...137,361,232 		JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:16000322) MGI PMID:16000322 NCBI chr2A:73,438,657...73,671,313
Ensembl chr2A:74,926,650...75,152,139 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964 		JBrowse link
G BHLHE23 basic helix-loop-helix family member e23 acts_upstream_of_or_within ISO (PMID:17255172) MGI PMID:17255172 NCBI chr20:59,385,608...59,392,078 JBrowse link
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:17921253) MGI PMID:17921253 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242 		JBrowse link
G NRL neural retina leucine zipper involved_in
acts_upstream_of_or_within		 IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:4,858,105...4,891,207
Ensembl chr14:22,982,367...22,998,187 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678 		JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:50,979,412...51,311,431
Ensembl chr 8:48,419,033...48,583,879
Ensembl chr 8:48,419,033...48,583,879 		JBrowse link
G RPGRIP1 RPGR interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:2,105,703...2,169,362
Ensembl chr14:20,185,236...20,247,064 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G SAMD11 sterile alpha motif domain containing 11 involved_in ISO (PMID:33603070) UniProt PMID:33603070
G SAMD7 sterile alpha motif domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:166,914,164...166,952,937
Ensembl chr 3:174,980,176...175,007,421 		JBrowse link
G TRPM1 transient receptor potential cation channel subfamily M member 1 acts_upstream_of_or_within ISO (PMID:19966281) MGI PMID:19966281 NCBI chr15:9,492,500...9,653,644
Ensembl chr15:28,530,878...28,690,947 		JBrowse link
retinal rod cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:73,862,775...73,867,377
Ensembl chr12:76,713,028...76,716,956 		JBrowse link
G CNTF ciliary neurotrophic factor acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr11:53,876,081...53,882,870
Ensembl chr11:57,336,792...57,341,121 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr  X:36,399,868...36,424,953
Ensembl chr  X:44,224,161...44,249,067 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:16914133 RGD:9831439 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G RORB RAR related orphan receptor B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:50,144,836...50,340,910
Ensembl chr 9:73,469,767...73,543,030 		JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:19490914) MGI PMID:19490914
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:19490914) MGI PMID:19490914 NCBI chr17:66,028,737...66,034,122 JBrowse link
G STAT3 signal transducer and activator of transcription 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067 		JBrowse link
retinal rod cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 1:9,396,936...9,557,100
Ensembl chr 1:10,622,519...10,677,091 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    cellular process 18871
      cellular developmental process 4499
        cell differentiation 4498
          neuron differentiation 1665
            photoreceptor cell differentiation 87
              eye photoreceptor cell differentiation + 61
              negative regulation of photoreceptor cell differentiation + 7
              ocellus photoreceptor cell differentiation + 0
              photoreceptor cell development + 65
              photoreceptor cell fate commitment + 3
              positive regulation of photoreceptor cell differentiation + 2
              regulation of photoreceptor cell differentiation + 9
Path 2
Term Annotations click to browse term
  biological_process 19315
    developmental process 6685
      anatomical structure development 6266
        multicellular organism development 5026
          system development 4369
            nervous system development 2737
              neurogenesis 2026
                generation of neurons 1750
                  neuron differentiation 1665
                    photoreceptor cell differentiation 87
                      eye photoreceptor cell differentiation + 61
                      negative regulation of photoreceptor cell differentiation + 7
                      ocellus photoreceptor cell differentiation + 0
                      photoreceptor cell development + 65
                      photoreceptor cell fate commitment + 3
                      positive regulation of photoreceptor cell differentiation + 2
                      regulation of photoreceptor cell differentiation + 9
paths to the root