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ONTOLOGY REPORT - ANNOTATIONS


Term:isopentenyl diphosphate metabolic process
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Accession:GO:0046490 term browser browse the term
Definition:The chemical reactions and pathways involving isopentenyl diphosphate, an isomer of dimethylallyl diphosphate and the key precursor of all isoprenoids.
Synonyms:exact_synonym: IPP metabolic process;   IPP metabolism;   isopentenyl diphosphate metabolism;   isopentenyl pyrophosphate metabolic process;   isopentenyl pyrophosphate metabolism


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isopentenyl diphosphate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idi2 isopentenyl-diphosphate delta isomerase 2 ISO (PMID:17202134) RGD PMID:17202134 NCBI chr17:63,107,152...63,107,469 JBrowse link
isopentenyl diphosphate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028137.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:57,755,210...57,765,652 JBrowse link
G AABR07028157.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:57,906,050...57,908,621 JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:57,976,266...57,984,036
Ensembl chr17:57,976,268...57,984,036
JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:57,864,652...57,866,201
Ensembl chr17:57,864,244...57,865,804
JBrowse link
G LOC103694120 isopentenyl-diphosphate delta-isomerase 2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:57,814,239...57,816,277
Ensembl chr17:57,814,539...57,816,256
JBrowse link
G LOC291276 similar to isopentenyl diphosphate delta-isomerase type 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:57,701,861...57,705,698
Ensembl chr17:57,701,861...57,704,293
JBrowse link
G RGD1564347 similar to isopentenyl diphosphate delta-isomerase type 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:57,674,146...57,688,350
Ensembl chr17:57,676,569...57,687,379
JBrowse link
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:197206, PMID:21873635 RGD:2316852, RGD:13792537 NCBI chr19:55,258,910...55,268,933
Ensembl chr19:55,258,905...55,268,951
JBrowse link
G Mvk mevalonate kinase IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:197206, PMID:21873635 GO_REF:0000041, RGD:2316852, RGD:13792537 NCBI chr12:47,904,266...47,920,457
Ensembl chr12:47,904,719...47,919,400
JBrowse link
G Pmvk phosphomevalonate kinase IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:197206, PMID:21873635 GO_REF:0000041, RGD:2316852, RGD:13792537 NCBI chr 2:188,784,329...188,793,890
Ensembl chr 2:188,784,222...188,793,895
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        organophosphate metabolic process 971
          phospholipid metabolic process 415
            isopentenyl diphosphate metabolic process 11
              isopentenyl diphosphate biosynthetic process + 10
Path 2
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular metabolic process 11065
        phosphorus metabolic process 3289
          phosphate-containing compound metabolic process 3268
            phospholipid metabolic process 415
              isopentenyl diphosphate metabolic process 11
                isopentenyl diphosphate biosynthetic process + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.