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ONTOLOGY REPORT - ANNOTATIONS

Term:ether lipid metabolic process
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Accession:GO:0046485 term browser browse the term
Definition:The chemical reactions and pathways involving ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol.
Synonyms:exact_synonym: ether lipid metabolism
 narrow_synonym: plasmalogen metabolic process
 xref: Wikipedia:Ether_lipid


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ether lipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGMO alkylglycerol monooxygenase involved_in IDA (PMID:20643956) UniProt PMID:20643956 NCBI chr 7:15,117,223...15,562,015
Ensembl chr 7:15,200,317...15,562,015 		JBrowse link
G LIPE lipase E, hormone sensitive type involved_in ISS UniProt GO_REF:0000024 NCBI chr19:42,401,514...42,427,388
Ensembl chr19:42,401,514...42,427,388 		JBrowse link
G NCEH1 neutral cholesterol ester hydrolase 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:172,630,249...172,711,067
Ensembl chr 3:172,630,249...172,711,218 		JBrowse link
G PLAAT1 phospholipase A and acyltransferase 1 acts_upstream_of_or_within ISO (PMID:22134920) MGI PMID:22134920 NCBI chr 3:193,240,606...193,281,426
Ensembl chr 3:193,241,128...193,277,738 		JBrowse link
G PLAAT3 phospholipase A and acyltransferase 3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:63,574,462...63,616,927
Ensembl chr11:63,573,195...63,616,883 		JBrowse link
G PXMP4 peroxisomal membrane protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:35169201) Ensembl
MGI		 PMID:35169201 GO_REF:0000107 NCBI chr20:33,702,758...33,720,310
Ensembl chr20:33,702,758...33,720,319 		JBrowse link
G TMEM86B transmembrane protein 86B involved_in IDA
IBA
IEA		 (PMID:21515882) UniProt
GO_Central
TreeGrafter		 PMID:21515882 GO_REF:0000033 GO_REF:0000118 NCBI chr19:55,226,638...55,228,763
Ensembl chr19:55,226,638...55,228,784 		JBrowse link
ether lipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGPS alkylglycerone phosphate synthase involved_in ISS
IEA		 UniProt GO_REF:0000024 GO_REF:0000041 NCBI chr 2:177,392,773...177,543,834
Ensembl chr 2:177,392,746...177,567,024 		JBrowse link
G DHRS7B dehydrogenase/reductase 7B involved_in TAS
IEA		 Reactome
Ensembl		 GO_REF:0000107 Reactome:R-HSA-75896 NCBI chr17:21,126,964...21,191,420
Ensembl chr17:21,123,364...21,193,265 		JBrowse link
G FAR1 fatty acyl-CoA reductase 1 involved_in IMP
IDA		 (PMID:20071337)
(PMID:24108123)		 UniProt PMID:20071337 PMID:24108123 NCBI chr11:13,668,668...13,732,346
Ensembl chr11:13,668,668...13,732,346 		JBrowse link
G FASN fatty acid synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:82,078,338...82,098,236
Ensembl chr17:82,078,338...82,098,294 		JBrowse link
G GNPAT glyceronephosphate O-acyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IDA
TAS		 (PMID:12874108)
(PMID:15687349)		 InterPro
MGI
GO_Central
TreeGrafter
Ensembl
UniProt
Reactome		 PMID:12874108 PMID:15687349 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 Reactome:R-HSA-75896 NCBI chr 1:231,241,212...231,277,973
Ensembl chr 1:231,241,207...231,277,973 		JBrowse link
G PEDS1 plasmanylethanolamine desaturase 1 involved_in IMP
IBA
IEA
IDA		 (PMID:32209662)
(PMID:31604315)		 UniProt
GO_Central
TreeGrafter
Ensembl		 PMID:31604315 PMID:32209662 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:50,118,254...50,153,723
Ensembl chr20:50,118,254...50,153,734 		JBrowse link
G PEDS1-UBE2V1 PEDS1-UBE2V1 readthrough involved_in IMP
IBA
IEA
IDA		 (PMID:32209662)
(PMID:31604315)		 UniProt
GO_Central
TreeGrafter
Ensembl		 PMID:31604315 PMID:32209662 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:50,081,124...50,153,723
Ensembl chr20:50,081,124...50,153,637 		JBrowse link
G PEX7 peroxisomal biogenesis factor 7 involved_in IMP (PMID:12522768), (PMID:9090383) UniProt PMID:9090383 PMID:12522768 NCBI chr 6:136,822,592...136,913,934
Ensembl chr 6:136,822,564...136,913,934 		JBrowse link
platelet activating factor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHPT1 choline phosphotransferase 1 involved_in IDA (PMID:10893425) UniProt PMID:10893425 NCBI chr12:101,697,640...101,729,074
Ensembl chr12:101,696,947...101,744,140 		JBrowse link
G LPCAT2 lysophosphatidylcholine acyltransferase 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:55,509,072...55,586,666
Ensembl chr16:55,509,072...55,586,666 		JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in IEA
NAS		 (PMID:9430701) Ensembl
UniProt		 PMID:9430701 GO_REF:0000107 NCBI chr 1:186,828,949...186,988,981
Ensembl chr 1:186,828,949...186,988,981 		JBrowse link
G PLA2G4C phospholipase A2 group IVC involved_in IDA (PMID:19501189) UniProt PMID:19501189 NCBI chr19:48,047,846...48,110,817
Ensembl chr19:48,047,843...48,110,817 		JBrowse link
G PLA2G5 phospholipase A2 group V ISO RGD PMID:11106649 RGD:2303037 NCBI chr 1:20,028,408...20,091,911
Ensembl chr 1:20,028,179...20,091,911 		JBrowse link
platelet activating factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLA2G10 phospholipase A2 group X involved_in IDA (PMID:16962371) UniProt PMID:16962371 NCBI chr16:14,672,548...14,701,850
Ensembl chr16:14,672,548...14,694,308 		JBrowse link
G PLA2G10BP phospholipase A2 group XB, pseudogene involved_in IDA (PMID:16962371) UniProt PMID:16962371 NCBI chr16:14,709,058...14,742,495 JBrowse link
G PLA2G7 phospholipase A2 group VII involved_in IDA (PMID:16371369) UniProt PMID:16371369 NCBI chr 6:46,704,201...46,735,721
Ensembl chr 6:46,704,201...46,735,693 		JBrowse link
platelet activating factor metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISS (PMID:8028668) BHF-UCL PMID:8028668 NCBI chr17:2,593,183...2,685,615
Ensembl chr17:2,593,210...2,685,615 		JBrowse link
G PLA2G6 phospholipase A2 group VI involved_in ISS UniProt GO_REF:0000024 NCBI chr22:38,111,495...38,181,830
Ensembl chr22:38,111,495...38,214,778 		JBrowse link
G PLA2G7 phospholipase A2 group VII involved_in IDA (PMID:10066756), (PMID:10504265), (PMID:11590221), (PMID:8624782) UniProt PMID:8624782 PMID:10066756 PMID:10504265 PMID:11590221 NCBI chr 6:46,704,201...46,735,721
Ensembl chr 6:46,704,201...46,735,693 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19770
    metabolic process 12509
      cellular metabolic process 11168
        cellular lipid metabolic process 1131
          ether lipid metabolic process 25
            ether lipid biosynthetic process + 13
            platelet activating factor metabolic process + 10
Path 2
Term Annotations click to browse term
  biological_process 19770
    metabolic process 12509
      small molecule metabolic process 2024
        ether metabolic process 30
          glycerol ether metabolic process 25
            ether lipid metabolic process 25
              ether lipid biosynthetic process + 13
              platelet activating factor metabolic process + 10
paths to the root