Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:glycosylceramide biosynthetic process
go back to main search page
Accession:GO:0046476 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.
Synonyms:exact_synonym: glycosylceramide anabolism;   glycosylceramide biosynthesis;   glycosylceramide formation;   glycosylceramide synthesis


show annotations for term's descendants           Sort by:
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:67,395,528...67,953,226
Ensembl chr 2:67,396,215...67,953,033 		JBrowse link
G B3galt2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:143,516,435...143,525,675
Ensembl chr 1:143,516,402...143,530,352 		JBrowse link
G B4galt3 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 1:171,097,898...171,104,468
Ensembl chr 1:171,097,898...171,104,469 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IMP
ISO
IDA		 (MGI:3826747|PMID:18815260)
(MGI:3696647|PMID:15658937)		 UniProt
MGI		 PMID:15658937 PMID:18815260 GO_REF:0000096 MGI:3696647 MGI:3826747 MGI:4417868 NCBI chr 8:112,071,770...112,120,453
Ensembl chr 8:112,071,767...112,120,456 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IBA
IDA		 (MGI:6201960|PMID:21873635)
(MGI:1355015|PMID:10727929)		 GO_Central
MGI		 PMID:10727929 PMID:21873635 MGI:1355015 MGI:6201960 NCBI chr11:3,933,636...3,949,328
Ensembl chr11:3,933,636...3,949,326 		JBrowse link
G Ugt8a UDP galactosyltransferase 8A involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 NCBI chr 3:125,655,071...125,732,301
Ensembl chr 3:125,658,920...125,732,268 		JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in IMP (MGI:5285470|PMID:21628453) UniProt PMID:21628453 MGI:5285470 NCBI chr 8:112,071,770...112,120,453
Ensembl chr 8:112,071,767...112,120,456 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in ISO
IMP
IBA		 (MGI:2180222|PMID:10430909), (MGI:3603060|PMID:16109770), (MGI:5448789|PMID:22851168), (MGI:5510915|PMID:23748427)
(MGI:6201960|PMID:21873635)		 MGI
UniProt
GO_Central		 PMID:10430909 PMID:16109770 PMID:21873635 PMID:22851168 PMID:23748427 GO_REF:0000096 MGI:2180222 MGI:3603060 MGI:4834177 MGI:5448789 MGI:5510915 MGI:6201960 NCBI chr 4:59,189,452...59,222,833
Ensembl chr 4:59,189,257...59,222,833 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28775
    metabolic process 11619
      nitrogen compound metabolic process 7844
        amide metabolic process 1322
          ceramide metabolic process 102
            glycosylceramide metabolic process 16
              glycosylceramide biosynthetic process 7
                galactosylceramide biosynthetic process 6
                glucosylceramide biosynthetic process + 2
Path 2
Term Annotations click to browse term
  biological_process 28775
    metabolic process 11619
      primary metabolic process 8509
        lipid metabolic process 1505
          cellular lipid metabolic process 1076
            membrane lipid metabolic process 193
              sphingolipid metabolic process 147
                ceramide metabolic process 102
                  glycosylceramide metabolic process 16
                    glycosylceramide biosynthetic process 7
                      galactosylceramide biosynthetic process 6
                      glucosylceramide biosynthetic process + 2
paths to the root