Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:glycosylceramide biosynthetic process
go back to main search page
Accession:GO:0046476 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.
Synonyms:exact_synonym: glycosylceramide anabolism;   glycosylceramide biosynthesis;   glycosylceramide formation;   glycosylceramide synthesis

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 beta-1,3-galactosyltransferase 1 involved_in ISO (PMID:9582303) BHF-UCL PMID:9582303 NCBI chrNW_004955449:6,452,189...7,007,329
Ensembl chrNW_004955449:6,452,189...6,553,158 		JBrowse link
G B3galt2 beta-1,3-galactosyltransferase 2 involved_in ISO (PMID:9582303) BHF-UCL PMID:9582303 NCBI chrNW_004955406:30,603,238...30,610,822
Ensembl chrNW_004955406:30,603,238...30,610,822 		JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in ISO (PMID:9405390) BHF-UCL PMID:9405390 NCBI chrNW_004955468:12,934,521...12,945,435
Ensembl chrNW_004955468:12,932,059...12,940,723 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISO PMID:17901466
(MGI:3826747|PMID:18815260)
(MGI:3696647|PMID:15658937)		 UniProt PMID:15658937 PMID:17901466 PMID:18815260 MGI:3696647 MGI:3826747 RGD:13825191 NCBI chrNW_004955484:2,726,496...2,775,763
Ensembl chrNW_004955484:2,726,362...2,775,903 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 acts_upstream_of_or_within ISO (MGI:1355015|PMID:10727929) MGI PMID:10727929 MGI:1355015 NCBI chrNW_004955455:4,771,378...4,794,085
Ensembl chrNW_004955455:4,771,346...4,784,142 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in ISO PMID:8713090 UniProt PMID:8713090 RGD:39458006 NCBI chrNW_004955428:24,800,854...24,864,904
Ensembl chrNW_004955428:24,800,854...24,865,378 		JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in ISO (MGI:5285470|PMID:21628453) UniProt PMID:21628453 MGI:5285470 NCBI chrNW_004955484:2,726,496...2,775,763
Ensembl chrNW_004955484:2,726,362...2,775,903 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in ISO (PMID:8643456)
(MGI:2180222|PMID:10430909), (MGI:3603060|PMID:16109770), (MGI:5448789|PMID:22851168), (MGI:5510915|PMID:23748427)		 UniProt PMID:8643456 PMID:10430909 PMID:16109770 PMID:22851168 PMID:23748427 MGI:2180222 MGI:3603060 MGI:5448789 MGI:5510915 NCBI chrNW_004955419:15,417,468...15,451,936
Ensembl chrNW_004955419:15,416,796...15,451,936 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12334
    metabolic process 7839
      nitrogen compound metabolic process 5392
        amide metabolic process 773
          ceramide metabolic process 93
            glycosylceramide metabolic process 16
              glycosylceramide biosynthetic process 7
                galactosylceramide biosynthetic process 6
                glucosylceramide biosynthetic process + 2
Path 2
Term Annotations click to browse term
  biological_process 12334
    metabolic process 7839
      primary metabolic process 5772
        lipid metabolic process 987
          cellular lipid metabolic process 731
            membrane lipid metabolic process 161
              sphingolipid metabolic process 123
                ceramide metabolic process 93
                  glycosylceramide metabolic process 16
                    glycosylceramide biosynthetic process 7
                      galactosylceramide biosynthetic process 6
                      glucosylceramide biosynthetic process + 2
paths to the root