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ONTOLOGY REPORT - ANNOTATIONS


Term:glycerophospholipid catabolic process
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Accession:GO:0046475 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue.
Synonyms:exact_synonym: glycerophospholipid breakdown;   glycerophospholipid catabolism;   glycerophospholipid degradation;   phosphoglyceride catabolic process;   phosphoglyceride catabolism


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glycerophospholipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in ISO (PMID:25290914) RGD PMID:25290914 NCBI chr 3:139,659,315...139,719,529
Ensembl chr 3:139,659,317...139,719,564
JBrowse link
G Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:71,840,497...71,883,936
Ensembl chr10:71,840,497...71,883,850
JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:181,373,505...181,383,063
Ensembl chr 1:181,366,626...181,383,063
JBrowse link
G Gpcpd1 glycerophosphocholine phosphodiesterase 1 involved_in IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 3:119,787,681...119,832,550
Ensembl chr 3:119,787,682...119,832,517
JBrowse link
G Lipc lipase C, hepatic type IDA phosphatidylcholine, phosphatidylethanolamine hydrolysis RGD PMID:9048565 RGD:2308766 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Pla2g4b phospholipase A2 group IVB involved_in IBA
ISO
PMID:21873635
(PMID:10085124)
RGD PMID:10085124 PMID:21873635 RGD:13792537 NCBI chr 3:107,004,238...107,013,853
Ensembl chr 3:107,005,489...107,013,853
JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in IBA
ISO
PMID:21873635
(PMID:10085124)
RGD PMID:10085124 PMID:21873635 RGD:13792537 NCBI chr 1:74,249,688...74,272,133
Ensembl chr 1:74,236,211...74,274,656
JBrowse link
G Pla2g4d phospholipase A2 group IVD involved_in ISO
IBA
(PMID:14709560)
PMID:21873635
RGD PMID:14709560 PMID:21873635 RGD:13792537 NCBI chr 3:107,220,973...107,242,224
Ensembl chr 3:107,220,978...107,242,224
JBrowse link
G Pla2g4e phospholipase A2, group IVE involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:107,132,540...107,198,609
Ensembl chr 3:107,132,541...107,198,233
JBrowse link
G Pla2g4f phospholipase A2, group IVF involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:107,249,053...107,266,201
Ensembl chr 3:107,250,075...107,264,689
JBrowse link
G Prdx6 peroxiredoxin 6 involved_in ISO (PMID:10893423) RGD PMID:10893423 NCBI chr13:73,528,746...73,539,295
Ensembl chr13:73,528,210...73,539,355
JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in ISO
IBA
(PMID:16517606)
PMID:21873635
RGD PMID:16517606 PMID:21873635 RGD:13792537 NCBI chr11:83,362,534...83,386,257
Ensembl chr11:83,362,534...83,386,250
JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:2302419) RGD PMID:2302419 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375
JBrowse link
phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in IBA
IEA
ISO
IDA
PMID:21873635
GO_REF:0000107
(MGI:5050048|PMID:21240269)
PMID:21240271
(PMID:21240271)
Ensembl
RGD
PMID:21240269 PMID:21240271 PMID:21873635 PMID:21240271 GO_REF:0000107 MGI:5050048, RGD:13792537, RGD:8553522 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in ISO (MGI:5616003|PMID:25528375) RGD PMID:25528375 MGI:5616003 NCBI chr 1:181,373,505...181,383,063
Ensembl chr 1:181,366,626...181,383,063
JBrowse link
G Pla2g10 phospholipase A2, group X involved_in IEA
ISO
GO_REF:0000107
(PMID:12021277)
Ensembl
RGD
PMID:12021277 GO_REF:0000107 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
JBrowse link
G Pla2g15 phospholipase A2, group XV involved_in ISS
ISO
GO_REF:0000024
(MGI:3654404|PMID:16880524), (MGI:3694368|PMID:16837646), (MGI:6392937|PMID:17626977)
UniProt
RGD
PMID:16837646 PMID:16880524 PMID:17626977 GO_REF:0000024 MGI:3654404 MGI:3694368 MGI:6392937 NCBI chr19:34,050,685...34,068,070
Ensembl chr19:34,050,694...34,068,063
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:1100763|PMID:9403693)
GO_REF:0000024
(PMID:12672805), (PMID:14709560), (PMID:17472963), (PMID:7794891), (PMID:9425121)
Ensembl
RGD
UniProt
PMID:7794891 PMID:9403693 PMID:9425121 PMID:12672805 PMID:14709560 More... GO_REF:0000024 GO_REF:0000107 MGI:1100763 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Pla2g5 phospholipase A2, group V involved_in ISS
ISO
GO_REF:0000024
(PMID:23533611)
UniProt
RGD
PMID:23533611 GO_REF:0000024 NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658
JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISS
ISO
GO_REF:0000024
(PMID:20886109)
UniProt
RGD
PMID:20886109 GO_REF:0000024 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G Pla2g7 phospholipase A2 group VII involved_in ISO (PMID:2040620) RGD PMID:2040620 NCBI chr 9:17,362,214...17,404,476
Ensembl chr 9:17,362,225...17,404,476
JBrowse link
G Plb1 phospholipase B1 involved_in IDA PMID:9442065
PMID:9442064
UniProt PMID:9442065 PMID:9442064 RGD:633237, RGD:30309923 NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117
JBrowse link
G Pnliprp2 pancreatic lipase related protein 2 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:17401110)
Ensembl
UniProt
RGD
PMID:17401110 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:257,897,766...257,916,434
Ensembl chr 1:257,897,766...257,916,434
JBrowse link
G Pnpla7 patatin-like phospholipase domain containing 7 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6393153|PMID:28887301)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28887301 GO_REF:0000024 GO_REF:0000107 MGI:6393153 NCBI chr 3:7,782,572...7,861,504
Ensembl chr 3:7,782,572...7,861,497
JBrowse link
G Pnpla8 patatin-like phospholipase domain containing 8 involved_in ISO (PMID:15695510) RGD PMID:15695510 NCBI chr 6:61,329,810...61,391,736
Ensembl chr 6:61,329,810...61,391,734
JBrowse link
phosphatidylethanolamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g15 phospholipase A2, group XV involved_in ISS
ISO
GO_REF:0000024
(MGI:3654404|PMID:16880524), (MGI:3694368|PMID:16837646)
UniProt
RGD
PMID:16837646 PMID:16880524 GO_REF:0000024 MGI:3654404 MGI:3694368 NCBI chr19:34,050,685...34,068,070
Ensembl chr19:34,050,694...34,068,063
JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G Plb1 phospholipase B1 involved_in IDA PMID:9442064 UniProt PMID:9442064 RGD:30309923 NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117
JBrowse link
G Pnpla8 patatin-like phospholipase domain containing 8 involved_in ISO (PMID:15695510) RGD PMID:15695510 NCBI chr 6:61,329,810...61,391,736
Ensembl chr 6:61,329,810...61,391,734
JBrowse link
phosphatidylglycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g4a phospholipase A2 group IVA involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:9425121)
UniProt
Ensembl
RGD
PMID:9425121 GO_REF:0000024 GO_REF:0000107 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Plb1 phospholipase B1 involved_in IDA PMID:9442064 UniProt PMID:9442064 RGD:30309923 NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117
JBrowse link
phosphatidylinositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inpp5f inositol polyphosphate-5-phosphatase F acts_upstream_of_or_within ISO MGI:4128518 (MGI:4943859|PMID:19875726) RGD PMID:19875726 MGI:4943859 NCBI chr 1:183,190,480...183,270,276
Ensembl chr 1:183,190,480...183,270,276
JBrowse link
G Plcb1 phospholipase C beta 1 IDA RGD PMID:8387502 RGD:11535163 NCBI chr 3:122,059,968...122,772,896
Ensembl chr 3:122,060,031...122,772,869
JBrowse link
G Plcb3 phospholipase C beta 3 IDA RGD PMID:8387502 RGD:11535163 NCBI chr 1:204,143,257...204,160,384
Ensembl chr 1:204,144,956...204,160,228
JBrowse link
phosphatidylserine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
MGI:5487621 (MGI:5469248|PMID:23297193)
GO_REF:0000024
(PMID:30643283)
RGD
UniProt
PMID:23297193 PMID:30643283 PMID:21873635 GO_REF:0000024 MGI:5469248, RGD:13792537 NCBI chr 3:139,659,315...139,719,529
Ensembl chr 3:139,659,317...139,719,564
JBrowse link
G Abhd12b abhydrolase domain containing 12B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:88,668,748...88,696,166
Ensembl chr 6:88,668,642...88,696,458
JBrowse link
G Abhd16a abhydrolase domain containing 16A, phospholipase involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:5779796|PMID:25580854)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25580854 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5779796, RGD:13792537 NCBI chr20:3,719,089...3,733,952
Ensembl chr20:3,719,091...3,733,927
JBrowse link
G Abhd16b abhydrolase domain containing 16B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:168,594,677...168,596,574
Ensembl chr 3:168,594,609...168,619,762
JBrowse link
platelet activating factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g10 phospholipase A2, group X involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16962371)
Ensembl
UniProt
RGD
PMID:16962371 GO_REF:0000024 GO_REF:0000107 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
JBrowse link
G Pla2g7 phospholipase A2 group VII involved_in ISO (PMID:16371369) RGD PMID:16371369 NCBI chr 9:17,362,214...17,404,476
Ensembl chr 9:17,362,225...17,404,476
JBrowse link
regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in IEA
ISO
GO_REF:0000107
(MGI:3784112|PMID:18175806)
Ensembl
RGD
PMID:18175806 GO_REF:0000107 MGI:3784112 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO (MGI:3784112|PMID:18175806) RGD PMID:18175806 MGI:3784112 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11797
      catabolic process 2548
        cellular catabolic process 2181
          cellular lipid catabolic process 227
            phospholipid catabolic process 53
              glycerophospholipid catabolic process 32
                CDP-diacylglycerol catabolic process 0
                phosphatidylcholine catabolic process + 15
                phosphatidylethanolamine catabolic process 4
                phosphatidylglycerol catabolic process 2
                phosphatidylinositol catabolic process + 3
                phosphatidylserine catabolic process 4
                platelet activating factor catabolic process 2
Path 2
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular metabolic process 10717
        phosphorus metabolic process 2828
          phosphate-containing compound metabolic process 2806
            phospholipid metabolic process 377
              glycerophospholipid metabolic process 288
                glycerophospholipid catabolic process 32
                  CDP-diacylglycerol catabolic process 0
                  phosphatidylcholine catabolic process + 15
                  phosphatidylethanolamine catabolic process 4
                  phosphatidylglycerol catabolic process 2
                  phosphatidylinositol catabolic process + 3
                  phosphatidylserine catabolic process 4
                  platelet activating factor catabolic process 2
paths to the root