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ONTOLOGY REPORT - ANNOTATIONS

Term:glycerophospholipid biosynthetic process
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Accession:GO:0046474 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue.
Synonyms:exact_synonym: glycerophospholipid anabolism;   glycerophospholipid biosynthesis;   glycerophospholipid formation;   glycerophospholipid synthesis;   phosphoglyceride biosynthesis;   phosphoglyceride biosynthetic process


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glycerophospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO (PMID:15870270) RGD PMID:15870270 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:17482562) RGD PMID:17482562 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G Far1 fatty acyl CoA reductase 1 involved_in ISO
IEA		 (PMID:20071337)
GO_REF:0000107		 RGD
Ensembl		 PMID:20071337 GO_REF:0000107 NCBI chr 1:167,644,622...167,705,868
Ensembl chr 1:167,644,677...167,705,730 		JBrowse link
G Hdhd5 haloacid dehalogenase like hydrolase domain containing 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:153,701,026...153,753,303
Ensembl chr 4:153,718,791...153,753,277 		JBrowse link
1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26774281)		 UniProt
Ensembl
RGD		 PMID:26774281 GO_REF:0000024 GO_REF:0000107 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029 		JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO
IEA
ISS		 (PMID:26774281)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26774281 GO_REF:0000024 GO_REF:0000107 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938 		JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO
IEA
ISS		 (PMID:26774281)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26774281 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078 		JBrowse link
attachment of GPI anchor to protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:108,051,896...108,055,479
Ensembl chr 7:108,051,861...108,055,484 		JBrowse link
G Pigk phosphatidylinositol glycan anchor biosynthesis, class K involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:241,630,021...241,715,493
Ensembl chr 2:241,630,053...241,716,134 		JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis, class S involved_in ISO
IBA		 (MGI:3688056|PMID:11483512)
GO_REF:0000033		 RGD
GO_Central		 PMID:11483512 GO_REF:0000033 MGI:3688056 NCBI chr10:63,222,611...63,237,190
Ensembl chr10:63,222,572...63,237,187 		JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis, class T involved_in ISO
IBA		 (MGI:3688056|PMID:11483512)
GO_REF:0000033		 RGD
GO_Central		 PMID:11483512 GO_REF:0000033 MGI:3688056 NCBI chr 3:153,227,749...153,236,922
Ensembl chr 3:153,227,420...153,236,887 		JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U involved_in IEA
IBA
ISO		 GO_REF:0000002
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
(PMID:12802054)		 InterPro
TreeGrafter
GO_Central
Ensembl
RGD		 PMID:12802054 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807 		JBrowse link
cardiolipin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crls1 cardiolipin synthase 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:16678169)		 UniProt
GO_Central
RGD		 PMID:16678169 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:120,119,822...120,138,674
Ensembl chr 3:120,119,852...120,138,655 		JBrowse link
G ENSRNOG00000065266 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr  X:116,711,549...116,712,324 JBrowse link
G Pgs1 phosphatidylglycerophosphate synthase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,214,635...103,250,254
Ensembl chr10:103,214,646...103,250,254 		JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO
IEA		 (PMID:19164547)
GO_REF:0000107		 RGD
Ensembl		 PMID:19164547 GO_REF:0000107 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114 		JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO
IEA
ISS		 (PMID:16939411)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:16939411 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,566,556...54,573,240
Ensembl chr10:54,566,873...54,578,709 		JBrowse link
G Ptpmt1 protein tyrosine phosphatase, mitochondrial 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5288296|PMID:21641550)		 UniProt
RGD		 PMID:21641550 GO_REF:0000024 MGI:5288296 NCBI chr 3:76,889,922...76,899,427
Ensembl chr 3:76,889,922...76,899,427 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000118
GO_REF:0000107		 RGD
TreeGrafter
Ensembl		 PMID:19523918 GO_REF:0000107 GO_REF:0000118 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:11118295), (PMID:16873891), (PMID:17043667), (PMID:19164547) RGD PMID:11118295 PMID:16873891 PMID:17043667 PMID:19164547 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001 		JBrowse link
G Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694 		JBrowse link
CDP-choline pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cept1 choline/ethanolamine phosphotransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Chka choline kinase alpha involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000108
(MGI:3695773|PMID:16861741)
GO_REF:0000033		 GOC
RGD
GO_Central		 PMID:16861741 GO_REF:0000033 GO_REF:0000108 MGI:3695773 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Chkb choline kinase beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:120,500,960...120,504,359
Ensembl chr 7:120,500,984...120,504,461 		JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline involved_in IDA
ISO		 PMID:19783652
(MGI:2667298|PMID:12842190)
PMID:8185307
(PMID:10480912)
PMID:8381041		 RGD PMID:10480912 PMID:12842190 PMID:19783652 PMID:8185307 PMID:8381041 MGI:2667298, RGD:8553740, RGD:39458015, RGD:729578 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357 		JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in IEA
ISO
ISS		 GO_REF:0000107
GO_REF:0000002
(MGI:2667298|PMID:12842190)
GO_REF:0000024
(PMID:10480912)		 Ensembl
InterPro
RGD
UniProt		 PMID:10480912 PMID:12842190 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:2667298 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935 		JBrowse link
G Phka1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:67,601,302...67,738,504
Ensembl chr  X:67,601,302...67,738,455 		JBrowse link
CDP-diacylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:48,525,131...48,633,798
Ensembl chr 1:48,527,323...48,633,345 		JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
(PMID:8863531)
GO_REF:0000041
(PMID:25375833), (PMID:9407135)		 UniProt
RGD		 PMID:8863531 PMID:9407135 PMID:25375833 GO_REF:0000024 GO_REF:0000041 NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681 		JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISO
ISS
IEA		 (PMID:25375833)
GO_REF:0000024
GO_REF:0000041		 RGD
UniProt		 PMID:25375833 GO_REF:0000024 GO_REF:0000041 NCBI chr 3:119,514,963...119,553,555
Ensembl chr 3:119,515,000...119,553,541 		JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639 		JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:114,646,446...114,657,051
Ensembl chr 3:114,648,498...114,657,051 		JBrowse link
G Gpat3 glycerol-3-phosphate acyltransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:8,715,367...8,768,051
Ensembl chr14:8,714,373...8,766,490 		JBrowse link
G Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694 		JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07038703.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr  X:54,564,018...54,565,271 JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:34,754,279...34,800,530
Ensembl chr14:34,754,289...34,800,814 		JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:10835346), (PMID:9535917)
(PMID:9535917)
GO_REF:0000033
(PMID:9535917), (PMID:9724629)		 RGD
GO_Central		 PMID:9535917 PMID:9724629 PMID:10835346 GO_REF:0000033 NCBI chr 3:156,919,979...156,939,522
Ensembl chr 3:156,919,979...156,939,536 		JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory involved_in
acts_upstream_of_or_within		 TAS
IBA
IEA
ISO
IDA		 GO_REF:0000033
GO_REF:0000107
(PMID:10835346), (PMID:16162815)
PMID:9724629		 GO_Central
Ensembl
RGD		 PMID:10835346 PMID:16162815 PMID:9724629 PMID:9724629 GO_REF:0000033 GO_REF:0000107, RGD:69827, RGD:69827 NCBI chr 3:15,855,952...15,858,867
Ensembl chr 3:15,856,182...15,869,165
Ensembl chr 3:15,856,182...15,869,165 		JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in ISO
IBA		 (PMID:10835346)
GO_REF:0000033		 RGD
GO_Central		 PMID:10835346 GO_REF:0000033 NCBI chr 2:174,676,532...174,677,047
Ensembl chr 2:174,676,363...174,677,668
Ensembl chr15:174,676,363...174,677,668 		JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 TAS RGD PMID:10702226 RGD:1331364 NCBI chr 7:108,051,896...108,055,479
Ensembl chr 7:108,051,861...108,055,484 		JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000043
(PMID:29374258)		 UniProt
RGD		 PMID:29374258 GO_REF:0000024 GO_REF:0000043 NCBI chr18:60,763,418...60,781,553
Ensembl chr18:60,763,419...60,781,553 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 IMP RGD PMID:14734546 RGD:1303970 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464 		JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in IMP
IEA
IBA
ISO		 PMID:16407401
GO_REF:0000118
GO_REF:0000033
GO_REF:0000043
(PMID:29374258)		 TreeGrafter
GO_Central
UniProt
RGD		 PMID:29374258 PMID:16407401 GO_REF:0000033 GO_REF:0000043 GO_REF:0000118, RGD:8553507 NCBI chr 1:156,591,540...156,618,116
Ensembl chr 1:156,591,615...156,618,114 		JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in ISO
IBA		 (PMID:29374258)
GO_REF:0000033		 RGD
GO_Central		 PMID:29374258 GO_REF:0000033 NCBI chr10:83,387,113...83,399,357
Ensembl chr10:83,387,113...83,398,628 		JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:29374258)		 UniProt
GO_Central
RGD		 PMID:29374258 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:63,931,916...63,947,004
Ensembl chr 5:63,930,682...63,951,716 		JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis, class A involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000041
MGI:3652879 (PMID:8611683)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:8611683 GO_REF:0000033 GO_REF:0000041 NCBI chr  X:30,043,033...30,055,861
Ensembl chr  X:30,042,343...30,055,804 		JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis, class B involved_in ISO
IBA		 (PMID:8861954)
GO_REF:0000033		 RGD
GO_Central		 PMID:8861954 GO_REF:0000033 NCBI chr 8:73,751,756...73,775,679
Ensembl chr 8:73,751,798...73,775,679 		JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis, class C involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000041
(PMID:16162815), (PMID:27694521)		 UniProt
RGD		 PMID:16162815 PMID:27694521 GO_REF:0000024 GO_REF:0000041 NCBI chr13:74,343,619...74,346,148
Ensembl chr13:74,296,854...74,346,211 		JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis, class F involved_in ISO
IBA
IEA		 (PMID:33386993)
GO_REF:0000033
GO_REF:0000041
(MGI:1860649|PMID:10781593)		 RGD
GO_Central
UniProt		 PMID:10781593 PMID:33386993 GO_REF:0000033 GO_REF:0000041 MGI:1860649 NCBI chr 6:7,589,584...7,617,719
Ensembl chr 6:7,589,570...7,639,675 		JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis, class G acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15632136)
GO_REF:0000041		 RGD
UniProt		 PMID:15632136 GO_REF:0000041 NCBI chr14:1,404,911...1,433,199
Ensembl chr14:1,406,798...1,433,187 		JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis, class H involved_in ISO
IBA
IEA		 (PMID:16162815)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:16162815 GO_REF:0000033 GO_REF:0000041 NCBI chr 6:97,874,903...97,897,188
Ensembl chr 6:97,882,903...97,897,142 		JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis, class L IDA RGD PMID:9188481 RGD:729509 NCBI chr10:47,142,160...47,199,892
Ensembl chr10:47,141,780...47,200,145 		JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis, class M involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:11226175 GO_REF:0000033 GO_REF:0000041, RGD:70624 NCBI chr13:84,838,329...84,842,026
Ensembl chr13:84,838,175...84,843,381 		JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis, class N involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr13:21,659,092...21,812,932
Ensembl chr13:21,662,455...21,806,790 		JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis, class O involved_in ISO
IBA
IEA		 (MGI:1860649|PMID:10781593)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:10781593 GO_REF:0000033 GO_REF:0000041 MGI:1860649 NCBI chr 5:57,244,721...57,256,252
Ensembl chr 5:57,245,166...57,254,146 		JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis, class P involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:16162815), (PMID:28334793)
(PMID:10944123)
GO_REF:0000033		 RGD
GO_Central		 PMID:10944123 PMID:16162815 PMID:28334793 GO_REF:0000033 NCBI chr11:33,682,943...33,689,111
Ensembl chr11:33,682,948...33,689,321 		JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis, class Q involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:16162815)
PomBase:SPBC30D10.11|SGD:S000003448 (PMID:10373468), (PMID:9729469)
GO_REF:0000033		 RGD
GO_Central		 PMID:9729469 PMID:10373468 PMID:16162815 GO_REF:0000033 NCBI chr10:14,942,571...14,958,584
Ensembl chr10:14,942,577...14,958,584 		JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U involved_in ISO (PMID:15034568) RGD PMID:15034568 NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807 		JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis, class V involved_in ISO
IBA
IEA		 UniProtKB:P38211 (PMID:15623507), (PMID:15720390)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:15623507 PMID:15720390 GO_REF:0000033 GO_REF:0000041 NCBI chr 5:145,889,642...145,901,533
Ensembl chr 5:145,889,646...145,901,533 		JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis, class W involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr10:69,746,996...69,782,656
Ensembl chr10:69,748,789...69,790,475 		JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis, class X involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr11:68,687,126...68,703,067
Ensembl chr11:68,687,093...68,703,472 		JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis, class Y acts_upstream_of_or_within ISO (PMID:16162815) RGD PMID:16162815 NCBI chr 8:20,689,621...20,691,863
Ensembl chr 8:20,689,502...20,692,585 		JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis, class Z involved_in ISO UniProtKB:Q04174 (PMID:15208306) RGD PMID:15208306 NCBI chr11:68,831,847...68,851,798 JBrowse link
G Slc30a5 solute carrier family 30 member 5 acts_upstream_of_positive_effect ISO (PMID:35525268) RGD PMID:35525268 NCBI chr 2:31,945,745...31,975,969
Ensembl chr 2:31,945,729...31,975,934 		JBrowse link
negative regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of_or_within ISO (PMID:20018880) RGD PMID:20018880 NCBI chr 1:29,766,070...29,816,401
Ensembl chr 1:29,766,071...29,816,401 		JBrowse link
negative regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:2538439)		 UniProt
Ensembl
RGD		 PMID:2538439 GO_REF:0000024 GO_REF:0000107 NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:2538439)		 UniProt
Ensembl
RGD		 PMID:2538439 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:27,697,384...27,716,013
Ensembl chr15:27,704,113...27,716,966 		JBrowse link
G Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase involved_in ISO
IBA
IEA
ISS		 (PMID:18606822)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl
UniProt		 PMID:18606822 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:122,000,241...122,026,447
Ensembl chr 8:122,000,389...122,026,447 		JBrowse link
G Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:9212163)
(PMID:9299423)
GO_REF:0000033		 RGD
GO_Central		 PMID:9212163 PMID:9299423 GO_REF:0000033 NCBI chr20:4,135,955...4,144,880
Ensembl chr20:4,135,957...4,145,278 		JBrowse link
G Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 involved_in ISO
IBA		 (PMID:9212163)
GO_REF:0000033		 RGD
GO_Central		 PMID:9212163 GO_REF:0000033 NCBI chr 3:9,416,837...9,428,567
Ensembl chr 3:9,416,843...9,428,371 		JBrowse link
G Dgka diacylglycerol kinase, alpha involved_in ISO
IEA
ISS		 (PMID:15544348), (PMID:2175712), (PMID:22627129)
GO_REF:0000107
GO_REF:0000024
(PMID:23949095)		 RGD
Ensembl
UniProt		 PMID:2175712 PMID:15544348 PMID:22627129 PMID:23949095 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,148,734...1,175,324
Ensembl chr 7:1,148,735...1,175,110 		JBrowse link
G Dgkb diacylglycerol kinase, beta involved_in IDA PMID:23949095 UniProt PMID:23949095 RGD:30309912 NCBI chr 6:54,640,948...55,397,210
Ensembl chr 6:54,641,614...55,397,043 		JBrowse link
G Dgkd diacylglycerol kinase, delta involved_in ISO (PMID:17880279), (PMID:23949095) RGD PMID:17880279 PMID:23949095 NCBI chr 9:88,516,686...88,607,349
Ensembl chr 9:88,516,715...88,607,345 		JBrowse link
G Dgke diacylglycerol kinase epsilon involved_in ISO (PMID:15544348), (PMID:19744926), (PMID:22108654) RGD PMID:15544348 PMID:19744926 PMID:22108654 NCBI chr10:73,853,030...73,877,334
Ensembl chr10:73,855,583...73,877,100 		JBrowse link
G Dgkg diacylglycerol kinase, gamma involved_in ISO
ISS		 (PMID:8034597)
(MGI:6431961|PMID:32033984)
GO_REF:0000024		 RGD
UniProt		 PMID:8034597 PMID:32033984 GO_REF:0000024 MGI:6431961 NCBI chr11:78,384,212...78,579,158
Ensembl chr11:78,384,458...78,577,212 		JBrowse link
G Dgkh diacylglycerol kinase, eta involved_in ISO (MGI:6253974|PMID:27643686) RGD PMID:27643686 MGI:6253974 NCBI chr15:53,981,079...54,150,470
Ensembl chr15:53,991,481...54,150,706 		JBrowse link
G Dgki diacylglycerol kinase, iota involved_in IDA PMID:15024004 UniProt PMID:15024004 RGD:1302915 NCBI chr 4:65,410,878...65,872,733
Ensembl chr 4:65,420,108...65,872,733 		JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISS
ISO		 GO_REF:0000024
(PMID:22732145), (PMID:23610160), (PMID:23767959), (PMID:23949095), (PMID:9099683)		 UniProt
RGD		 PMID:9099683 PMID:22732145 PMID:23610160 PMID:23767959 PMID:23949095 GO_REF:0000024 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131 		JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:2672999|PMID:12883552), (MGI:6201900|PMID:27739494)
(PMID:15544348), (PMID:19744926)		 UniProt
Ensembl
RGD		 PMID:12883552 PMID:15544348 PMID:19744926 PMID:27739494 GO_REF:0000024 GO_REF:0000107 MGI:2672999 MGI:6201900 NCBI chr 3:77,904,149...77,946,114
Ensembl chr 3:77,904,150...77,946,099 		JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in IMP PMID:22905194 UniProt PMID:22905194 RGD:30309909 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639 		JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial involved_in ISS
ISO		 GO_REF:0000024
(MGI:6228436|PMID:22905194)		 UniProt
RGD		 PMID:22905194 GO_REF:0000024 MGI:6228436 NCBI chr 3:114,646,446...114,657,051
Ensembl chr 3:114,648,498...114,657,051 		JBrowse link
G Lpin1 lipin 1 IEP RGD PMID:21715287 RGD:38599010 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097 		JBrowse link
G Pld1 phospholipase D1 involved_in
acts_upstream_of_or_within		 IEA
IMP		 GO_REF:0000002
PMID:18519738		 InterPro PMID:18519738 GO_REF:0000002, RGD:8554572 NCBI chr 2:110,849,205...111,047,304
Ensembl chr 2:110,893,608...111,047,692 		JBrowse link
G Pld2 phospholipase D2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:55,256,326...55,274,192
Ensembl chr10:55,256,359...55,272,808 		JBrowse link
G Pnpla3 patatin-like phospholipase domain containing 3 involved_in ISO (PMID:22560221)
(MGI:5426312|PMID:22560221)		 RGD PMID:22560221 MGI:5426312 NCBI chr 7:115,293,538...115,314,077
Ensembl chr 7:115,293,538...115,314,077 		JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 acts_upstream_of_or_within ISO (PMID:12456676) RGD PMID:12456676 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000118
GO_REF:0000107		 RGD
TreeGrafter
Ensembl		 PMID:19523918 GO_REF:0000107 GO_REF:0000118 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in ISO
IEA		 (PMID:4335615)
GO_REF:0000107		 RGD
Ensembl		 PMID:4335615 GO_REF:0000107 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 acts_upstream_of_or_within ISO (PMID:20018880) RGD PMID:20018880 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Chka choline kinase alpha involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:16371353)
(PMID:34077757)
(PMID:19915674)		 UniProt
RGD		 PMID:16371353 PMID:19915674 PMID:34077757 GO_REF:0000024 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Chkb choline kinase beta acts_upstream_of_or_within ISO MGI:3578417 (PMID:16371353) RGD PMID:16371353 NCBI chr 7:120,500,960...120,504,359
Ensembl chr 7:120,500,984...120,504,461 		JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:10893425)
(PMID:20018880)		 RGD PMID:10893425 PMID:20018880 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G Dhrs7b dehydrogenase/reductase 7B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:28930673)		 Ensembl
RGD		 PMID:28930673 GO_REF:0000107 NCBI chr10:45,504,344...45,537,094
Ensembl chr10:45,504,426...45,537,076 		JBrowse link
G Fabp5 fatty acid binding protein 5 acts_upstream_of_or_within ISO MGI:95476 (PMID:15164767) RGD PMID:15164767 NCBI chr 2:91,765,056...91,768,716
Ensembl chr 2:91,765,056...91,853,773 		JBrowse link
G Fgf7 fibroblast growth factor 7 IMP surfactant disaturated phosphatidylcholine (DSPC) synthesis RGD PMID:11316745 RGD:68696 NCBI chr 3:113,280,448...113,333,279
Ensembl chr 3:113,281,283...113,332,929 		JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 involved_in ISO (PMID:18238778) RGD PMID:18238778 NCBI chr16:68,819,031...68,852,903
Ensembl chr16:68,819,079...68,852,901 		JBrowse link
G Lcat lecithin cholesterol acyltransferase involved_in ISO
IEA		 (PMID:11966470), (PMID:12354767)
GO_REF:0000107		 RGD
Ensembl		 PMID:11966470 PMID:12354767 GO_REF:0000107 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231 		JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of ISO (PMID:20018880) RGD PMID:20018880 NCBI chr 1:29,766,070...29,816,401
Ensembl chr 1:29,766,071...29,816,401 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880 		JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline acts_upstream_of_or_within
involved_in		 TAS
ISO
IDA
IMP		 MGI:2176050|MGI:3027956 (PMID:11829742), (PMID:15798219)
(MGI:2667298|PMID:12842190)
PMID:8381041
PMID:8185307
(PMID:10480912)		 RGD PMID:10480912 PMID:11829742 PMID:12842190 PMID:15798219 PMID:2166941 More... MGI:2667298, RGD:70012, RGD:729578, RGD:39458015, RGD:729598 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357 		JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline involved_in ISO
ISS		 (PMID:10480912)
(MGI:2667298|PMID:12842190)
GO_REF:0000024		 RGD
UniProt		 PMID:10480912 PMID:12842190 GO_REF:0000024 MGI:2667298 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:8344945 GO_REF:0000033 GO_REF:0000041, RGD:729486 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Phka1 phosphorylase kinase regulatory subunit alpha 1 TAS RGD PMID:12401806 RGD:724642 NCBI chr  X:67,601,302...67,738,504
Ensembl chr  X:67,601,302...67,738,455 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000118
GO_REF:0000107		 RGD
TreeGrafter
Ensembl		 PMID:19523918 GO_REF:0000107 GO_REF:0000118 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
phosphatidylethanolamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5436199|PMID:22503541)		 UniProt
Ensembl
RGD		 PMID:22503541 GO_REF:0000024 GO_REF:0000107 MGI:5436199 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874 		JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000118
GO_REF:0000033		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000041 GO_REF:0000118 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Chka choline kinase alpha involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:19915674)
GO_REF:0000041		 UniProt
GO_Central
Ensembl
RGD		 PMID:19915674 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Chkb choline kinase beta involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000041
(PMID:19915674)		 UniProt
GO_Central
RGD		 PMID:19915674 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr 7:120,500,960...120,504,359
Ensembl chr 7:120,500,984...120,504,461 		JBrowse link
G Chpt1 choline phosphotransferase 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G Etnk1 ethanolamine kinase 1 involved_in ISO
IBA		 (PMID:11044454)
GO_REF:0000033		 RGD
GO_Central		 PMID:11044454 GO_REF:0000033 NCBI chr 4:176,126,056...176,170,325
Ensembl chr 4:176,126,180...176,193,770 		JBrowse link
G Etnk2 ethanolamine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000041
MGI:3526407 (PMID:16861741)
GO_REF:0000118
GO_REF:0000033		 UniProt
RGD
TreeGrafter
GO_Central		 PMID:16861741 GO_REF:0000033 GO_REF:0000041 GO_REF:0000118 NCBI chr13:44,811,012...44,829,052
Ensembl chr13:44,811,015...44,829,037 		JBrowse link
G Pcyt2 phosphate cytidylyltransferase 2, ethanolamine involved_in TAS
IBA
ISO
IEA
ISS		 GO_REF:0000033
(MGI:3709941|PMID:17325045)
GO_REF:0000041
GO_REF:0000024
(PMID:31637422)		 GO_Central
RGD
UniProt		 PMID:17325045 PMID:31637422 PMID:10493918 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 MGI:3709941, RGD:633525 NCBI chr10:105,888,769...105,896,182
Ensembl chr10:105,888,775...105,896,172 		JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000041
(PMID:30488656), (PMID:30858161)		 UniProt
GO_Central
RGD		 PMID:30488656 PMID:30858161 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr14:77,941,927...77,991,021
Ensembl chr14:77,941,948...77,991,003 		JBrowse link
G Selenoi selenoprotein I involved_in ISO
IBA		 (PMID:17132865), (PMID:28052917), (PMID:29500230)
GO_REF:0000033		 RGD
GO_Central		 PMID:17132865 PMID:28052917 PMID:29500230 GO_REF:0000033 NCBI chr 6:26,073,127...26,111,326
Ensembl chr 6:26,072,648...26,111,314 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000118
GO_REF:0000107		 RGD
TreeGrafter
Ensembl		 PMID:19523918 GO_REF:0000107 GO_REF:0000118 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
phosphatidylglycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial involved_in ISO
ISS
IEA		 (PMID:19075029)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:19075029 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO (PMID:19523918) RGD PMID:19523918 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:8110188), (PMID:9407135)		 GO_Central
Ensembl
RGD		 PMID:8110188 PMID:9407135 PMID:8804431 PMID:7998949 GO_REF:0000033 GO_REF:0000107, RGD:724663, RGD:1626301 NCBI chr 1:181,583,098...181,587,409
Ensembl chr 1:181,583,141...181,587,408 		JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9407135)		 UniProt
RGD		 PMID:9407135 GO_REF:0000024 NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681 		JBrowse link
G Dgke diacylglycerol kinase epsilon involved_in ISO (MGI:6414743|PMID:19744926) RGD PMID:19744926 MGI:6414743 NCBI chr10:73,853,030...73,877,334
Ensembl chr10:73,855,583...73,877,100 		JBrowse link
G Impa1 inositol monophosphatase 1 involved_in IMP
ISO		 (PMID:1377913) RGD PMID:1377913 PMID:11853098 RGD:2302239 NCBI chr 2:91,462,781...91,484,057
Ensembl chr 2:91,462,799...91,484,313 		JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21624956)		 Ensembl
RGD		 PMID:21624956 GO_REF:0000107 NCBI chr 1:156,183,043...156,197,500
Ensembl chr 1:156,183,059...156,197,500 		JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 involved_in ISO (PMID:18094042) RGD PMID:18094042 NCBI chr 1:65,525,206...65,539,538
Ensembl chr 1:65,525,213...65,539,538 		JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO
ISS		 (PMID:11279162)
GO_REF:0000024		 RGD
UniProt		 PMID:11279162 GO_REF:0000024 NCBI chr 1:240,902,804...240,929,234
Ensembl chr 1:240,902,855...240,929,337 		JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma NAS RGD PMID:9685379 RGD:633581 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078 		JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha acts_upstream_of_or_within ISO MGI:1298224 (PMID:20622009) RGD PMID:20622009 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598 		JBrowse link
G Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta acts_upstream_of_or_within ISO MGI:1298224 (PMID:20622009) RGD PMID:20622009 NCBI chr 1:221,907,220...222,183,672
Ensembl chr 1:221,914,159...222,183,672 		JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma acts_upstream_of_or_within ISO MGI:3054978 (PMID:20622009) RGD PMID:20622009 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:11606584), (PMID:12181444)		 Ensembl
UniProt
RGD		 PMID:11606584 PMID:12181444 GO_REF:0000024 GO_REF:0000107 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930 		JBrowse link
G Sh3yl1 SH3 and SYLF domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21624956)		 Ensembl
RGD		 PMID:21624956 GO_REF:0000107 NCBI chr 6:47,522,098...47,565,858
Ensembl chr 6:47,522,091...47,565,858 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000118
GO_REF:0000107		 RGD
TreeGrafter
Ensembl		 PMID:19523918 GO_REF:0000107 GO_REF:0000118 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
G Vac14 VAC14 component of PIKFYVE complex involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:38,590,569...38,691,911
Ensembl chr19:38,590,569...38,691,909 		JBrowse link
phosphatidylinositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:96,865,634...96,893,506
Ensembl chr13:96,868,580...96,893,503 		JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:17,775,684...17,802,570
Ensembl chr 5:17,772,608...17,802,570 		JBrowse link
G Cish cytokine inducible SH2-containing protein involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:107,972,306...107,977,254
Ensembl chr 8:107,972,306...107,977,250 		JBrowse link
G Efr3b EFR3 homolog B involved_in ISO (PMID:23229899) RGD PMID:23229899 NCBI chr 6:26,947,436...27,021,113
Ensembl chr 6:26,948,540...27,020,933 		JBrowse link
G Hycc1 hyccin PI4KA lipid kinase complex subunit 1 involved_in ISO
IBA		 (PMID:26571211)
GO_REF:0000033		 RGD
GO_Central		 PMID:26571211 GO_REF:0000033 NCBI chr 4:11,132,224...11,239,120
Ensembl chr 4:11,132,385...11,239,113 		JBrowse link
G Hycc2 hyccin PI4KA lipid kinase complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:60,056,883...60,129,176
Ensembl chr 9:60,056,890...60,093,007 		JBrowse link
G Impa1 inositol monophosphatase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:91,462,781...91,484,057
Ensembl chr 2:91,462,799...91,484,313 		JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:60,834,206...60,867,575
Ensembl chr18:60,834,246...60,865,641 		JBrowse link
G Inpp1 inositol polyphosphate-1-phosphatase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:48,688,037...48,717,793
Ensembl chr 9:48,669,901...48,717,793 		JBrowse link
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:10574768)		 UniProt
GO_Central
RGD		 PMID:10574768 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:108,693,068...108,737,278 JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in ISO
IBA
IEA		 (PMID:10574768)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:10574768 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:109,483,843...109,510,172
Ensembl chr 8:109,484,310...109,510,166 		JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:5,223,863...5,245,443
Ensembl chr20:5,224,120...5,245,428 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in ISS
ISO		 GO_REF:0000024
(PMID:12747803), (PMID:1847047)		 UniProt
RGD		 PMID:1847047 PMID:12747803 GO_REF:0000024 NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in ISS
ISO		 GO_REF:0000024
(PMID:12747803)		 UniProt
RGD		 PMID:12747803 GO_REF:0000024 NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004 		JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11085927), (PMID:12747803)		 UniProt
Ensembl
RGD		 PMID:11085927 PMID:12747803 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:82,500,957...82,522,533
Ensembl chr 1:82,500,957...82,522,779 		JBrowse link
G P3r3urf PIK3R3 upstream open reading frame involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:129,656,654...129,673,140
Ensembl chr 5:129,656,833...129,672,848 		JBrowse link
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha involved_in ISO
IBA
IEA		 (PMID:11923287), (PMID:12324459), (PMID:25168678)
GO_REF:0000033
GO_REF:0000104		 RGD
GO_Central
UniProt		 PMID:11923287 PMID:12324459 PMID:25168678 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:240,902,804...240,929,234
Ensembl chr 1:240,902,855...240,929,337 		JBrowse link
G Pi4k2b phosphatidylinositol 4-kinase type 2 beta involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:11923287), (PMID:12324459)		 UniProt
GO_Central
RGD		 PMID:11923287 PMID:12324459 GO_REF:0000024 GO_REF:0000033 NCBI chr14:58,221,790...58,248,716
Ensembl chr14:58,220,437...58,248,673 		JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in ISO
IBA
IEA		 (MGI:5476893|PMID:23229899)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:23229899 GO_REF:0000033 GO_REF:0000107 MGI:5476893 NCBI chr11:83,609,148...83,726,876
Ensembl chr11:83,609,069...83,724,080 		JBrowse link
G Pi4kb phosphatidylinositol 4-kinase beta involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033
GO_REF:0000118		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:182,540,377...182,572,684
Ensembl chr 2:182,540,567...182,588,488 		JBrowse link
G Pik3c2g phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:172,483,752...172,851,623
Ensembl chr 4:172,484,345...172,850,544 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in ISO (PMID:7628435) RGD PMID:7628435 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha IDA RGD PMID:12882977 RGD:4144086 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032 		JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in IDA
ISO		 (PMID:12502714) RGD PMID:12502714 PMID:12882977 RGD:4144086 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663 		JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma involved_in IDA
ISO		 (PMID:12502714) RGD PMID:12502714 PMID:12882977 RGD:4144086 NCBI chr 6:48,766,778...48,802,098
Ensembl chr 6:48,766,864...48,802,043 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISS
IBA
IEA		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:18,665,517...18,674,067
Ensembl chr16:18,665,457...18,674,065 		JBrowse link
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:129,700,925...129,772,591
Ensembl chr 5:129,701,229...129,772,583 		JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029 		JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938 		JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078 		JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598 		JBrowse link
G Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:221,907,220...222,183,672
Ensembl chr 1:221,914,159...222,183,672 		JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988 		JBrowse link
G Pip5kl1 phosphatidylinositol-4-phosphate 5-kinase-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:15,860,493...15,869,264
Ensembl chr 3:15,855,946...15,869,165 		JBrowse link
G Sla2 Src-like-adaptor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:145,367,070...145,383,586
Ensembl chr 3:145,368,598...145,382,480 		JBrowse link
G Smg1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:11331269) RGD PMID:11331269 NCBI chr 1:172,441,892...172,543,667
Ensembl chr 1:172,444,936...172,543,698 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383 		JBrowse link
G Socs2 suppressor of cytokine signaling 2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:30,006,360...30,045,161
Ensembl chr 7:30,008,578...30,043,548 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787 		JBrowse link
G Socs4 suppressor of cytokine signaling 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:20,523,406...20,537,889
Ensembl chr15:20,523,183...20,542,494 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834 		JBrowse link
G Socs6 suppressor of cytokine signaling 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:82,111,866...82,139,193
Ensembl chr18:82,111,827...82,139,219 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830 		JBrowse link
G Tmem150a transmembrane protein 150A involved_in ISS
ISO		 GO_REF:0000024
(PMID:25608530)		 UniProt
RGD		 PMID:25608530 GO_REF:0000024 NCBI chr 4:104,410,271...104,414,630
Ensembl chr 4:104,410,516...104,429,349 		JBrowse link
G Ttc7a tetratricopeptide repeat domain 7A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:7,159,285...7,261,826
Ensembl chr 6:7,159,061...7,261,892 		JBrowse link
G Ttc7b tetratricopeptide repeat domain 7B involved_in ISO
IBA		 (PMID:23229899), (PMID:26571211)
GO_REF:0000033		 RGD
GO_Central		 PMID:23229899 PMID:26571211 GO_REF:0000033 NCBI chr 6:119,587,389...119,799,167
Ensembl chr 6:119,587,390...119,799,330 		JBrowse link
phosphatidylinositol-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 involved_in ISO (PMID:8999962) RGD PMID:8999962 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113 		JBrowse link
G Atm ATM serine/threonine kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:8999962) RGD PMID:8999962 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Fig4 FIG4 phosphoinositide 5-phosphatase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:44,600,603...44,724,047
Ensembl chr20:44,600,603...44,723,844 		JBrowse link
G Inpp4a inositol polyphosphate-4-phosphatase type I A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:39,528,245...39,650,574
Ensembl chr 9:39,528,674...39,646,581 		JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:25,920,189...26,670,085
Ensembl chr19:25,925,358...26,280,634 		JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:9,216,776...9,229,539
Ensembl chr 3:9,216,776...9,229,450 		JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2685045 (PMID:24098492)		 GO_Central
RGD		 PMID:24098492 GO_REF:0000033 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472 		JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1203729 (PMID:24098492)		 GO_Central
RGD		 PMID:24098492 GO_REF:0000033 NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612 		JBrowse link
G Pik3c2g phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma involved_in ISO
IBA
IDA		 (MGI:1201706|PMID:9514948)
GO_REF:0000033
PMID:9516481		 RGD
GO_Central		 PMID:9514948 PMID:9516481 GO_REF:0000033 MGI:1201706, RGD:729517 NCBI chr 4:172,483,752...172,851,623
Ensembl chr 4:172,484,345...172,850,544 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:8999962)
(PMID:24098492)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000108		 RGD
GO_Central
Ensembl
GOC		 PMID:8999962 PMID:24098492 GO_REF:0000033 GO_REF:0000107 GO_REF:0000108 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032 		JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in IEA
IBA		 GO_REF:0000108
GO_REF:0000033		 GOC
GO_Central		 GO_REF:0000033 GO_REF:0000108 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663 		JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:160,094,952...160,142,962
Ensembl chr 5:160,094,952...160,120,930 		JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:48,766,778...48,802,098
Ensembl chr 6:48,766,864...48,802,043 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in ISO (PMID:8999962) RGD PMID:8999962 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584 		JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:8999962) RGD PMID:8999962 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
phosphatidylserine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plscr1 phospholipid scramblase 1 involved_in ISO (MGI:5284813|PMID:12509439) RGD PMID:12509439 MGI:5284813 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692 		JBrowse link
G Ptdss1 phosphatidylserine synthase 1 involved_in ISO
IEA		 (PMID:19014349)
GO_REF:0000041		 RGD
UniProt		 PMID:19014349 GO_REF:0000041 NCBI chr 7:63,845,017...63,906,791
Ensembl chr 7:63,844,268...63,906,791 		JBrowse link
G Ptdss2 phosphatidylserine synthase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19014349)
MGI:2447151 (PMID:12361952)
GO_REF:0000041		 RGD
UniProt		 PMID:12361952 PMID:19014349 GO_REF:0000041 NCBI chr 1:196,241,439...196,267,632
Ensembl chr 1:196,241,494...196,267,685 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:19523918)
GO_REF:0000118
GO_REF:0000107		 RGD
TreeGrafter
Ensembl		 PMID:19523918 GO_REF:0000107 GO_REF:0000118 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
platelet activating factor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chpt1 choline phosphotransferase 1 involved_in ISO
IEA		 (PMID:10893425)
GO_REF:0000107		 RGD
Ensembl		 PMID:10893425 GO_REF:0000107 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G Lpcat2 lysophosphatidylcholine acyltransferase 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:3708195|PMID:17182612)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17182612 GO_REF:0000024 GO_REF:0000107 MGI:3708195 NCBI chr19:14,088,389...14,152,742
Ensembl chr19:14,089,686...14,152,829 		JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO
IEA		 (MGI:1100762|PMID:9403692)
GO_REF:0000107		 RGD
Ensembl		 PMID:9403692 GO_REF:0000107 MGI:1100762 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266 		JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in ISO (PMID:19501189) RGD PMID:19501189 NCBI chr 1:74,237,714...74,275,757
Ensembl chr 1:74,236,211...74,274,656 		JBrowse link
G Pla2g5 phospholipase A2, group V IDA RGD PMID:11106649 RGD:2303037 NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658 		JBrowse link
positive regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO
IEA		 (PMID:23767959)
GO_REF:0000107		 RGD
Ensembl		 PMID:23767959 GO_REF:0000107 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
positive regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long-chain family member 3 involved_in ISO
IEA		 (PMID:18003621)
GO_REF:0000107		 RGD
Ensembl		 PMID:18003621 GO_REF:0000107 NCBI chr 9:80,115,164...80,164,636
Ensembl chr 9:80,115,112...80,164,627 		JBrowse link
G Capn2 calpain 2 IMP RGD PMID:9481489 RGD:13792658 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969 		JBrowse link
G Rab38 RAB38, member RAS oncogene family IDA RGD PMID:28438206 RGD:13524861 NCBI chr 1:142,182,566...142,262,923
Ensembl chr 1:142,182,556...142,262,924 		JBrowse link
positive regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr2a 5-hydroxytryptamine receptor 2A involved_in ISO (PMID:19057895) RGD PMID:19057895 NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928 		JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19057895)		 UniProt
Ensembl
RGD		 PMID:19057895 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:86,735,793...86,756,638
Ensembl chr 9:86,742,102...86,755,108 		JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C involved_in ISO (PMID:19057895) RGD PMID:19057895 NCBI chr  X:110,640,777...110,870,288
Ensembl chr  X:110,641,153...110,870,287 		JBrowse link
preassembly of GPI anchor in ER membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pigl phosphatidylinositol glycan anchor biosynthesis, class L involved_in IDA
ISO		 PMID:10085243
(PMID:10085243)		 RGD PMID:10085243 PMID:10085243 RGD:401901217 NCBI chr10:47,142,160...47,199,892
Ensembl chr10:47,141,780...47,200,145 		JBrowse link
regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO MGI:5014325 (PMID:27806294) RGD PMID:27806294 NCBI chr 1:205,731,828...205,743,430
Ensembl chr 1:205,733,872...205,743,421 		JBrowse link
regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101790 (PMID:15164767)		 Ensembl
RGD		 PMID:15164767 GO_REF:0000107 NCBI chr 5:142,651,962...142,658,707
Ensembl chr 5:142,651,956...142,658,718 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    cellular process 18769
      cellular metabolic process 10279
        cellular biosynthetic process 8211
          glycerolipid biosynthetic process 226
            glycerophospholipid biosynthetic process 176
              CDP-diacylglycerol biosynthetic process 7
              lysobisphosphatidic acid biosynthetic process 0
              phosphatidic acid biosynthetic process + 23
              phosphatidylcholine biosynthetic process + 22
              phosphatidylethanolamine biosynthetic process + 11
              phosphatidylglycerol biosynthetic process + 10
              phosphatidylinositol biosynthetic process + 106
              phosphatidylserine biosynthetic process + 4
              platelet activating factor biosynthetic process 5
Path 2
Term Annotations click to browse term
  biological_process 20292
    metabolic process 11720
      primary metabolic process 10271
        lipid metabolic process 1483
          cellular lipid metabolic process 1100
            glycerolipid metabolic process 398
              glycerolipid biosynthetic process 226
                glycerophospholipid biosynthetic process 176
                  CDP-diacylglycerol biosynthetic process 7
                  lysobisphosphatidic acid biosynthetic process 0
                  phosphatidic acid biosynthetic process + 23
                  phosphatidylcholine biosynthetic process + 22
                  phosphatidylethanolamine biosynthetic process + 11
                  phosphatidylglycerol biosynthetic process + 10
                  phosphatidylinositol biosynthetic process + 106
                  phosphatidylserine biosynthetic process + 4
                  platelet activating factor biosynthetic process 5
paths to the root