ONTOLOGY REPORT - ANNOTATIONS
Term: phosphatidylcholine metabolic process
Accession: GO:0046470
browse the term
Definition: The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes.
Synonyms: exact_synonym: phosphatidylcholine metabolism
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ABCA3
ATP binding cassette subfamily A member 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:38,679,312...38,712,868
Ensembl chr 6:38,679,324...38,712,648
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ABHD3
abhydrolase domain containing 3, phospholipase
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 7:66,331,687...66,383,443
Ensembl chr 7:66,332,410...66,382,942
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APOA4
apolipoprotein A4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:16,751,588...16,754,215
Ensembl chr 5:16,751,799...16,754,837
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LCAT
lecithin-cholesterol acyltransferase
involved_in
ISO
(PMID:26195816)
UniProt
PMID:26195816
NCBI chr 5:81,556,047...81,559,313
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LIPC
lipase C, hepatic type
ISO
RGD
PMID:2223857
RGD:1600650
NCBI chr30:23,432,460...23,584,037
Ensembl chr30:23,432,493...23,584,037
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MECP2
methyl-CpG binding protein 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17237885)
Ensembl MGI
PMID:17237885
GO_REF:0000107
NCBI chr X:121,866,721...121,876,088
Ensembl chr X:121,873,218...121,932,994
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MECP2
methyl-CpG binding protein 2
involved_in
IEA
Ensembl
GO_REF:0000107
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PLA2G10
phospholipase A2 group X
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 6:28,573,239...28,591,714
Ensembl chr 6:28,574,387...28,591,703
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PLA2G15
phospholipase A2 group XV
involved_in
ISO IEA ISS
RGD Ensembl UniProt
PMID:11238016
GO_REF:0000024 GO_REF:0000107 RGD:1582127
NCBI chr 5:81,269,914...81,280,700
Ensembl chr 5:81,269,920...81,280,700
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PLA2G1B
phospholipase A2 group IB
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr26:16,248,417...16,257,163
Ensembl chr26:16,248,409...16,257,178
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PLA2G2C
phospholipase A2 group IIC
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr 2:78,609,852...78,700,940
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PLA2G2D
phospholipase A2 group IID
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:78,739,826...78,745,839
Ensembl chr 2:78,739,769...78,745,920
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PLA2G2E
phospholipase A2 group IIE
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:78,834,820...78,838,058
Ensembl chr 2:78,831,309...78,841,821
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PLA2G2F
phospholipase A2 group IIF
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr 2:78,714,251...78,724,257
Ensembl chr 2:78,716,228...78,723,984
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PLA2G3
phospholipase A2 group III
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20424323)
Ensembl MGI
PMID:20424323
GO_REF:0000107
NCBI chr26:24,127,074...24,132,508
Ensembl chr26:24,128,005...24,132,508
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PLA2G5
phospholipase A2 group V
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr 2:78,762,851...78,781,642
Ensembl chr 2:78,762,852...78,781,983
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PLAAT1
phospholipase A and acyltransferase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr34:24,751,404...24,770,690
Ensembl chr34:24,760,155...24,770,690
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PNPLA6
patatin like phospholipase domain containing 6
involved_in
IEA
InterPro
GO_REF:0000002
NCBI chr20:52,327,547...52,349,006
Ensembl chr20:52,318,408...52,348,963
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PON1
paraoxonase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr14:20,565,620...20,600,774
Ensembl chr14:20,565,641...20,642,985
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CEPT1
choline/ethanolamine phosphotransferase 1
involved_in
IEA
GOC
GO_REF:0000108
NCBI chr 6:40,838,584...40,869,606
Ensembl chr 6:40,839,219...40,869,582
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CHKA
choline kinase alpha
involved_in
IEA IBA
GOC GO_Central
GO_REF:0000033 GO_REF:0000108
NCBI chr18:49,717,512...49,784,653
Ensembl chr18:49,745,437...49,781,882
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CHKB
choline kinase beta
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr10:16,733,071...16,736,797
Ensembl chr10:16,733,095...16,736,758
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CHPT1
choline phosphotransferase 1
involved_in
IEA
GOC
GO_REF:0000108
NCBI chr15:40,602,570...40,631,422
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PCYT1A
phosphate cytidylyltransferase 1A, choline
involved_in
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chr33:29,363,282...29,414,635
Ensembl chr33:29,358,452...29,430,424
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PCYT1B
phosphate cytidylyltransferase 1B, choline
involved_in
IEA
InterPro Ensembl
GO_REF:0000002 GO_REF:0000107
NCBI chr X:20,076,298...20,207,837
Ensembl chr X:20,079,772...20,207,722
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LPCAT1
lysophosphatidylcholine acyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20018880)
Ensembl MGI
PMID:20018880
GO_REF:0000107
NCBI chr34:11,162,715...11,195,380
Ensembl chr34:11,164,615...11,193,681
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APOC1
apolipoprotein C1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:110,520,177...110,522,563
Ensembl chr 1:110,520,198...110,631,412
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DBI
diazepam binding inhibitor, acyl-CoA binding protein
involved_in
ISO
(PMID:21079819)
UniProt
PMID:21079819
NCBI chr19:30,640,429...30,645,704
Ensembl chr19:30,640,429...30,646,405
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LPCAT1
lysophosphatidylcholine acyltransferase 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr34:11,162,715...11,195,380
Ensembl chr34:11,164,615...11,193,681
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LPCAT2
lysophosphatidylcholine acyltransferase 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:60,401,317...60,469,177
Ensembl chr 2:60,388,557...60,469,199
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LPCAT3
lysophosphatidylcholine acyltransferase 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr27:38,028,438...38,068,854
Ensembl chr27:38,028,120...38,068,502
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LPCAT4
lysophosphatidylcholine acyltransferase 4
involved_in
ISO
(PMID:18458083) (PMID:18156367)
UniProt
PMID:18156367 PMID:18458083
NCBI chr30:746,053...754,691
Ensembl chr30:743,407...754,409
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MBOAT2
membrane bound O-acyltransferase domain containing 2
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr17:6,090,746...6,217,139
Ensembl chr17:6,094,900...6,213,142
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MBOAT7
membrane bound O-acyltransferase domain containing 7
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:103,028,000...103,040,299
Ensembl chr 1:103,028,002...103,040,167
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NR1H2
nuclear receptor subfamily 1 group H member 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:106,332,691...106,339,168
Ensembl chr 1:106,332,798...106,339,135
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NR1H3
nuclear receptor subfamily 1 group H member 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr18:42,333,173...42,346,152
Ensembl chr18:42,333,202...42,341,236
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PLA2G2F
phospholipase A2 group IIF
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:78,714,251...78,724,257
Ensembl chr 2:78,716,228...78,723,984
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PLA2G4A
phospholipase A2 group IVA
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:19,804,412...19,955,215
Ensembl chr 7:19,832,664...19,966,936
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PLA2G4B
phospholipase A2 group IVB
involved_in
ISO
(PMID:10358058), (PMID:16617059)
UniProt
PMID:10358058 PMID:16617059
NCBI chr30:8,865,941...8,878,687
Ensembl chr30:8,859,257...8,876,395
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APOA1
apolipoprotein A1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 5:16,740,071...16,742,081
Ensembl chr 5:16,740,130...16,741,943
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APOA2
apolipoprotein A2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr38:21,263,641...21,265,887
Ensembl chr38:21,262,789...21,265,887
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CEPT1
choline/ethanolamine phosphotransferase 1
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:20018880)
MGI Ensembl
PMID:20018880
GO_REF:0000107
NCBI chr 6:40,838,584...40,869,606
Ensembl chr 6:40,839,219...40,869,582
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CHKA
choline kinase alpha
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:16371353)
Ensembl MGI
PMID:16371353
GO_REF:0000107
NCBI chr18:49,717,512...49,784,653
Ensembl chr18:49,745,437...49,781,882
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CHPT1
choline phosphotransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20018880)
Ensembl MGI
PMID:20018880
GO_REF:0000107
NCBI chr15:40,602,570...40,631,422
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DHRS7B
dehydrogenase/reductase 7B
acts_upstream_of_or_within
ISO
(PMID:28930673)
MGI
PMID:28930673
NCBI chr 5:42,603,027...42,666,446
Ensembl chr 5:42,603,078...42,665,673
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FGF7
fibroblast growth factor 7
ISO
surfactant disaturated phosphatidylcholine (DSPC) synthesis
RGD
PMID:11316745
RGD:68696
NCBI chr30:15,555,016...15,608,230
Ensembl chr30:15,555,266...15,606,521
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GPAT4
glycerol-3-phosphate acyltransferase 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr16:23,990,142...24,022,822
Ensembl chr16:23,911,972...24,010,152
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LCAT
lecithin-cholesterol acyltransferase
involved_in
ISO
(PMID:12354767) (PMID:11966470)
UniProt BHF-UCL
PMID:11966470 PMID:12354767
NCBI chr 5:81,556,047...81,559,313
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LOC102155424
fatty acid-binding protein 5
acts_upstream_of_or_within
ISO
(PMID:15164767)
MGI
PMID:15164767
NCBI chr X:35,086,820...35,087,968
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LPCAT1
lysophosphatidylcholine acyltransferase 1
involved_in acts_upstream_of
IEA ISO
(PMID:20018880)
Ensembl MGI
PMID:20018880
GO_REF:0000107
NCBI chr34:11,162,715...11,195,380
Ensembl chr34:11,164,615...11,193,681
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LPCAT3
lysophosphatidylcholine acyltransferase 3
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr27:38,028,438...38,068,854
Ensembl chr27:38,028,120...38,068,502
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PCYT1A
phosphate cytidylyltransferase 1A, choline
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11829742) (PMID:15798219)
RGD MGI UniProt Ensembl
PMID:11829742 PMID:12718547 PMID:15798219
GO_REF:0000041 GO_REF:0000107 RGD:729598
NCBI chr33:29,363,282...29,414,635
Ensembl chr33:29,358,452...29,430,424
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PCYT1B
phosphate cytidylyltransferase 1B, choline
involved_in
IEA
UniProt Ensembl
GO_REF:0000041 GO_REF:0000107
NCBI chr X:20,076,298...20,207,837
Ensembl chr X:20,079,772...20,207,722
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PEMT
phosphatidylethanolamine N-methyltransferase
involved_in
ISO IBA IEA
RGD GO_Central UniProt InterPro
PMID:8344945
GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 RGD:729486
NCBI chr 5:41,871,685...41,960,831
Ensembl chr 5:41,872,108...41,960,828
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ENPP2
ectonucleotide pyrophosphatase/phosphodiesterase 2
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr13:18,586,886...18,697,339
Ensembl chr13:18,587,129...18,697,324
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GDPD3
glycerophosphodiester phosphodiesterase domain containing 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:18,103,273...18,108,818
Ensembl chr 6:18,103,267...18,108,533
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PLA2G10
phospholipase A2 group X
involved_in
ISO
(PMID:12021277)
UniProt
PMID:12021277
NCBI chr 6:28,573,239...28,591,714
Ensembl chr 6:28,574,387...28,591,703
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PLA2G15
phospholipase A2 group XV
involved_in
IEA ISS
Ensembl UniProt
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:81,269,914...81,280,700
Ensembl chr 5:81,269,920...81,280,700
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PLA2G4A
phospholipase A2 group IVA
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:19,804,412...19,955,215
Ensembl chr 7:19,832,664...19,966,936
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PLA2G5
phospholipase A2 group V
involved_in
ISO
(PMID:23533611)
UniProt
PMID:23533611
NCBI chr 2:78,762,851...78,781,642
Ensembl chr 2:78,762,852...78,781,983
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PLA2G6
phospholipase A2 group VI
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr10:26,499,033...26,559,533
Ensembl chr10:26,509,695...26,634,087
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PLA2G7
phospholipase A2 group VII
involved_in
ISS IEA
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr12:14,866,229...14,908,230
Ensembl chr12:14,866,229...14,908,114
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PLB1
phospholipase B1
involved_in
ISO
PMID:9442065 PMID:9442064
UniProt
PMID:9442064 PMID:9442065
RGD:30309923 RGD:633237
NCBI chr17:22,420,679...22,558,318
Ensembl chr17:22,440,651...22,557,737
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PNLIPRP2
pancreatic lipase related protein 2
involved_in
ISO
(PMID:17401110)
UniProt
PMID:17401110
NCBI chr28:27,190,641...27,212,185
Ensembl chr28:27,139,230...27,212,178
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PNPLA7
patatin like phospholipase domain containing 7
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 9:48,221,754...48,286,352
Ensembl chr 9:48,221,514...48,286,352
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PNPLA8
patatin like phospholipase domain containing 8
involved_in
ISO
(PMID:15695510)
UniProt
PMID:15695510
NCBI chr18:12,134,921...12,181,496
Ensembl chr18:12,141,830...12,179,974
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LPCAT3
lysophosphatidylcholine acyltransferase 3
involved_in
IEA IBA
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr27:38,028,438...38,068,854
Ensembl chr27:38,028,120...38,068,502
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LPCAT4
lysophosphatidylcholine acyltransferase 4
involved_in
ISO
(PMID:18458083)
UniProt
PMID:18458083
NCBI chr30:746,053...754,691
Ensembl chr30:743,407...754,409
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LPGAT1
lysophosphatidylglycerol acyltransferase 1
involved_in
ISO
(PMID:35131264)
UniProt
PMID:35131264
NCBI chr 7:10,091,628...10,205,388
Ensembl chr 7:10,094,069...10,198,309
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MBOAT1
membrane bound O-acyltransferase domain containing 1
involved_in
ISO
(PMID:18287005)
UniProt
PMID:18287005
NCBI chr35:18,721,582...18,837,155
Ensembl chr35:18,713,654...18,836,142
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MBOAT2
membrane bound O-acyltransferase domain containing 2
involved_in
IBA
GO_Central
GO_REF:0000033
NCBI chr17:6,090,746...6,217,139
Ensembl chr17:6,094,900...6,213,142
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PLA2G2F
phospholipase A2 group IIF
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 2:78,714,251...78,724,257
Ensembl chr 2:78,716,228...78,723,984
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PLA2G4B
phospholipase A2 group IVB
involved_in
ISO
(PMID:16617059)
UniProt
PMID:16617059
NCBI chr30:8,865,941...8,878,687
Ensembl chr30:8,859,257...8,876,395
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ACSL3
acyl-CoA synthetase long chain family member 3
involved_in
ISO
(PMID:18003621)
UniProt
PMID:18003621
NCBI chr37:28,882,264...28,929,451
Ensembl chr37:28,864,147...28,938,866
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CAPN2
calpain 2
ISO
RGD
PMID:9481489
RGD:13792658
NCBI chr 7:40,333,379...40,367,158
Ensembl chr 7:40,334,012...40,377,037
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RAB38
RAB38, member RAS oncogene family
ISO
RGD
PMID:28438206
RGD:13524861
NCBI chr21:11,769,924...11,823,546
Ensembl chr21:11,769,351...11,822,815
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FABP3
fatty acid binding protein 3
acts_upstream_of_or_within
ISO
(PMID:15164767)
MGI
PMID:15164767
NCBI chr 2:69,651,140...69,659,082
Ensembl chr 2:69,650,322...69,658,443
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LDLR
low density lipoprotein receptor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:50,115,175...50,152,443
Ensembl chr20:50,048,736...50,152,355
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SCARB1
scavenger receptor class B member 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr26:5,035,797...5,122,383
Ensembl chr26:5,049,407...5,121,468
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ABCA3
ATP binding cassette subfamily A member 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:38,679,312...38,712,868
Ensembl chr 6:38,679,324...38,712,648
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MFSD2A
MFSD2 lysolipid transporter A, lysophospholipid
acts_upstream_of involved_in
ISO IEA
(PMID:26005868) (PMID:30074985)
ARUK-UCL Ensembl
PMID:26005868 PMID:30074985
GO_REF:0000107
NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all