ONTOLOGY REPORT - ANNOTATIONS |
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Term: | membrane lipid biosynthetic process |
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Accession: | GO:0046467
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browse the term
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Definition: | The chemical reactions and pathways resulting in the formation of membrane lipids, any lipid found in or associated with a biological membrane. |
Synonyms: | exact_synonym: | membrane lipid anabolism; membrane lipid biosynthesis; membrane lipid formation; membrane lipid synthesis |
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Agk |
acylglycerol kinase |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:15252046) |
GO_Central RGD |
PMID:15252046 |
GO_REF:0000033 |
NCBI chr 4:70,081,550...70,160,642
Ensembl chr 4:69,114,269...69,193,934
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Alox12b |
arachidonate 12-lipoxygenase, 12R type |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:17403930) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:17403930 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:54,361,898...54,373,776
Ensembl chr10:53,863,060...53,874,938
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Aloxe3 |
arachidonate epidermal lipoxygenase 3 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:22832496) MGI:5496904 (PMID:22832496) |
UniProt RGD |
PMID:22832496 |
GO_REF:0000024 |
NCBI chr10:54,329,224...54,353,167
Ensembl chr10:53,831,264...53,854,328
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Asah1 |
N-acylsphingosine amidohydrolase 1 |
involved_in |
ISO ISS |
(PMID:12764132), (PMID:12815059) GO_REF:0000024 |
RGD UniProt |
PMID:12764132 PMID:12815059 |
GO_REF:0000024 |
NCBI chr16:57,669,927...57,701,349
Ensembl chr16:50,966,229...51,008,233
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Asah2 |
N-acylsphingosine amidohydrolase 2 |
involved_in |
ISO IDA |
(PMID:11278489), (PMID:17475390) (PMID:21613224) PMID:15123644 |
RGD |
PMID:11278489 PMID:17475390 PMID:21613224 PMID:15123644 PMID:11278489 |
RGD:13838793, RGD:13838803 |
NCBI chr 1:239,278,994...239,386,598
Ensembl chr 1:229,865,662...229,939,162
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Cers1 |
ceramide synthase 1 |
involved_in |
ISO IBA |
(PMID:12105227), (PMID:12869556), (PMID:15823095), (PMID:17548428), (PMID:18541923), (PMID:22922758), (PMID:24782409) (PMID:16951403), (PMID:17977534), (PMID:21625621), (PMID:26620563), (PMID:30605666) GO_REF:0000033 |
RGD GO_Central |
PMID:12105227 PMID:12869556 PMID:15823095 PMID:16951403 PMID:17548428 PMID:17977534 PMID:18541923 PMID:21625621 PMID:22922758 PMID:24782409 PMID:26620563 PMID:30605666 More...
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GO_REF:0000033 |
NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
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Cers2 |
ceramide synthase 2 |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:17977534), (PMID:18165233), (PMID:29632068) (PMID:19801672), (PMID:26620563), (PMID:38961186) (PMID:15823095) GO_REF:0000033 |
RGD GO_Central |
PMID:15823095 PMID:17977534 PMID:18165233 PMID:19801672 PMID:26620563 PMID:29632068 PMID:38961186 More...
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GO_REF:0000033 |
NCBI chr 2:185,579,511...185,587,789
Ensembl chr 2:182,890,493...182,933,314
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Cers3 |
ceramide synthase 3 |
involved_in |
ISO IBA |
(PMID:17977534), (PMID:22038835), (PMID:23754960) (PMID:22038835) GO_REF:0000033 |
RGD GO_Central |
PMID:17977534 PMID:22038835 PMID:23754960 |
GO_REF:0000033 |
NCBI chr 1:129,728,136...129,833,182
Ensembl chr 1:120,318,212...120,422,902
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Cers4 |
ceramide synthase 4 |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:17977534), (PMID:29632068) (PMID:12912983), (PMID:15823095) GO_REF:0000033 |
RGD GO_Central |
PMID:12912983 PMID:15823095 PMID:17977534 PMID:29632068 |
GO_REF:0000033 |
NCBI chr12:7,649,610...7,688,066
Ensembl chr12:2,851,784...2,886,828
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Cers5 |
ceramide synthase 5 |
involved_in |
ISO IBA |
(PMID:16951403), (PMID:29632068) (PMID:16100120), (PMID:17609214), (PMID:17977534), (PMID:38961186) GO_REF:0000033 |
RGD GO_Central |
PMID:16100120 PMID:16951403 PMID:17609214 PMID:17977534 PMID:29632068 PMID:38961186 More...
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GO_REF:0000033 |
NCBI chr 7:132,738,834...132,776,920
Ensembl chr 7:130,859,990...130,897,947
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Cers6 |
ceramide synthase 6 |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:17609214), (PMID:17977534) (PMID:23760501), (PMID:26620563) (PMID:15823095) GO_REF:0000033 |
RGD GO_Central |
PMID:15823095 PMID:17609214 PMID:17977534 PMID:23760501 PMID:26620563 |
GO_REF:0000033 |
NCBI chr 3:74,038,520...74,287,544
Ensembl chr 3:53,630,959...53,876,848
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Cyp4f39 |
cytochrome P450, family 4, subfamily f, polypeptide 39 |
involved_in |
ISO IBA |
(PMID:26056268) GO_REF:0000033 |
RGD GO_Central |
PMID:26056268 |
GO_REF:0000033 |
NCBI chr 7:11,426,806...11,505,553
Ensembl chr 7:11,433,371...11,536,181
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Degs1 |
delta(4)-desaturase, sphingolipid 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:3529540 (PMID:22984457) |
GO_Central RGD |
PMID:22984457 |
GO_REF:0000033 |
NCBI chr13:93,946,154...93,953,677
Ensembl chr13:93,946,157...93,953,664
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Degs1l1 |
delta(4)-desaturase, sphingolipid 1 like 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:92,772,654...92,818,811
Ensembl chr13:92,772,649...92,818,574
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Degs1l2 |
delta(4)-desaturase, sphingolipid 1 like 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:92,831,549...92,839,257
Ensembl chr13:92,831,537...92,839,246
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Degs2 |
delta(4)-desaturase, sphingolipid 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 6:127,596,063...127,613,293
Ensembl chr 6:127,596,071...127,613,293
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Elovl1 |
ELOVL fatty acid elongase 1 |
involved_in |
ISO |
(PMID:23689133) |
RGD |
PMID:23689133 |
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NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
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Fa2h |
fatty acid 2-hydroxylase |
involved_in |
ISO ISS |
(PMID:15337768) (PMID:22517924) GO_REF:0000024 |
RGD UniProt |
PMID:15337768 PMID:22517924 |
GO_REF:0000024 |
NCBI chr19:56,222,240...56,273,480
Ensembl chr19:39,312,906...39,364,153
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Gba1 |
glucosylceramidase beta 1 |
involved_in |
ISO |
(PMID:19279011) |
RGD |
PMID:19279011 |
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NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:174,609,403...174,618,263
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Mecr |
mitochondrial trans-2-enoyl-CoA reductase |
acts_upstream_of involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:37653044) |
UniProt Ensembl RGD |
PMID:37653044 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:144,029,684...144,056,373
Ensembl chr 5:144,029,731...144,055,863
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P2rx1 |
purinergic receptor P2X 1 |
acts_upstream_of_or_within |
ISO |
(PMID:16325464) |
RGD |
PMID:16325464 |
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NCBI chr10:58,117,107...58,132,167
Ensembl chr10:57,618,586...57,633,623
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P2rx7 |
purinergic receptor P2X 7 |
acts_upstream_of_or_within |
ISO |
(PMID:16325464) |
RGD |
PMID:16325464 |
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NCBI chr12:39,550,531...39,594,984
Ensembl chr12:33,879,745...33,934,619
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Pnpla1 |
patatin-like phospholipase domain containing 1 |
involved_in |
ISO |
(PMID:27751867) |
RGD |
PMID:27751867 |
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NCBI chr20:6,919,689...6,953,850
Ensembl chr20:6,917,931...6,952,375
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Samd8 |
sterile alpha motif domain containing 8 |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:19506037) MGI:5749225 (PMID:25605874), (PMID:25667419) GO_REF:0000033 |
RGD GO_Central |
PMID:19506037 PMID:25605874 PMID:25667419 |
GO_REF:0000033 |
NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379 Ensembl chr15:2,512,105...2,515,379
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Sgms1 |
sphingomyelin synthase 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
(PMID:25605874) GO_REF:0000033 |
RGD GO_Central |
PMID:25605874 |
GO_REF:0000033 |
NCBI chr 1:239,409,991...239,681,195
Ensembl chr 1:229,998,119...230,259,603
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Sgms2 |
sphingomyelin synthase 2 |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000107 MGI:4818459 (PMID:25605874) GO_REF:0000033 |
Ensembl RGD GO_Central |
PMID:25605874 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:222,567,661...222,641,804
Ensembl chr 2:219,893,572...219,967,546
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Smpd1 |
sphingomyelin phosphodiesterase 1 |
involved_in |
IMP ISO IBA |
(PMID:35705808), (PMID:8706124) GO_REF:0000033 (PMID:17303575), (PMID:18815062), (PMID:19279011), (PMID:20807762), (PMID:33163980), (PMID:8706124) |
RGD GO_Central |
PMID:8706124 PMID:17303575 PMID:18815062 PMID:19279011 PMID:20807762 PMID:33163980 PMID:35705808 PMID:17261082 More...
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GO_REF:0000033, RGD:1601344 |
NCBI chr 1:169,304,772...169,308,615
Ensembl chr 1:159,892,859...159,896,794
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Smpd2 |
sphingomyelin phosphodiesterase 2 |
involved_in |
IDA IBA |
GO_REF:0000033 |
GO_Central RGD |
PMID:12473648 |
GO_REF:0000033, RGD:1581395 |
NCBI chr20:46,568,627...46,571,741
Ensembl chr20:44,986,231...44,989,441
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Smpd4 |
sphingomyelin phosphodiesterase 4 |
involved_in |
ISO IBA |
(PMID:16517606), (PMID:25180167) (PMID:25180167) GO_REF:0000033 |
RGD GO_Central |
PMID:16517606 PMID:25180167 |
GO_REF:0000033 |
NCBI chr11:96,866,805...96,890,520
Ensembl chr11:83,362,534...83,386,250
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Smpd5 |
sphingomyelin phosphodiesterase 5 |
involved_in |
ISO |
(PMID:21183079) |
RGD |
PMID:21183079 |
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NCBI chr 7:109,889,532...109,892,428
Ensembl chr 7:108,009,173...108,011,763
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Sptlc1 |
serine palmitoyltransferase, long chain base subunit 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
(PMID:25691431) MGI:3815115 (PMID:16216550) GO_REF:0000033 |
RGD GO_Central |
PMID:16216550 PMID:25691431 |
GO_REF:0000033 |
NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
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Sptlc2 |
serine palmitoyltransferase, long chain base subunit 2 |
acts_upstream_of_or_within involved_in |
ISO IBA IEA |
(PMID:25691431) MGI:3815117 (PMID:16216550) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:16216550 PMID:25691431 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:106,950,949...107,031,542
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Sptlc3 |
serine palmitoyltransferase, long chain base subunit 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 3:126,847,878...126,978,010
Ensembl chr 3:126,847,878...126,978,010
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Sptssa |
serine palmitoyltransferase, small subunit A |
acts_upstream_of_or_within involved_in |
ISO IBA |
(PMID:25691431) GO_REF:0000033 |
RGD GO_Central |
PMID:25691431 |
GO_REF:0000033 |
NCBI chr 6:77,879,931...77,891,344
Ensembl chr 6:72,144,714...72,156,214
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Sptssb |
serine palmitoyltransferase, small subunit B |
acts_upstream_of_or_within |
ISO |
MGI:5689843 (PMID:26438849) |
RGD |
PMID:26438849 |
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NCBI chr 2:154,133,728...154,162,127
Ensembl chr 2:154,133,733...154,163,120
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Tlcd3b |
TLC domain containing 3B |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:23275342) |
GO_Central RGD |
PMID:23275342 |
GO_REF:0000033 |
NCBI chr 1:190,851,582...190,870,278
Ensembl chr 1:181,422,830...181,439,743
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Samd8 |
sterile alpha motif domain containing 8 |
acts_upstream_of_or_within |
ISO |
(PMID:25667419) |
RGD |
PMID:25667419 |
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NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379 Ensembl chr15:2,512,105...2,515,379
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Sgms2 |
sphingomyelin synthase 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:25667419) |
Ensembl RGD |
PMID:25667419 |
GO_REF:0000107 |
NCBI chr 2:222,567,661...222,641,804
Ensembl chr 2:219,893,572...219,967,546
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B3galt1 |
Beta-1,3-galactosyltransferase 1 |
involved_in |
ISO |
(PMID:9582303) |
RGD |
PMID:9582303 |
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NCBI chr 3:72,661,410...73,234,447
Ensembl chr 3:52,253,618...52,825,313
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B3galt2 |
Beta-1,3-galactosyltransferase 2 |
involved_in |
ISO |
(PMID:9582303) |
RGD |
PMID:9582303 |
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NCBI chr13:57,939,724...57,948,735
Ensembl chr13:55,389,406...55,398,419
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B4galt3 |
beta-1,4-galactosyltransferase 3 |
involved_in |
ISO IBA IEA |
(PMID:9405390) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:9405390 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr13:86,223,827...86,229,886
Ensembl chr13:83,691,446...83,697,448
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Fa2h |
fatty acid 2-hydroxylase |
involved_in |
ISS ISO IMP IEA |
GO_REF:0000024 (PMID:15658937), (PMID:18815260) PMID:17901466 GO_REF:0000041 |
UniProt RGD |
PMID:15658937 PMID:18815260 PMID:17901466 |
GO_REF:0000024 GO_REF:0000041, RGD:13825191 |
NCBI chr19:56,222,240...56,273,480
Ensembl chr19:39,312,906...39,364,153
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Gal3st1 |
galactose-3-O-sulfotransferase 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:10727929) |
GO_Central RGD |
PMID:10727929 |
GO_REF:0000033 |
NCBI chr14:78,868,049...78,886,402
Ensembl chr14:78,870,793...78,886,388
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Ugt8 |
UDP glycosyltransferase 8 |
involved_in |
IDA IBA IEA |
PMID:8713090 GO_REF:0000033 GO_REF:0000041 |
GO_Central UniProt |
PMID:8713090 |
GO_REF:0000033 GO_REF:0000041, RGD:39458006 |
NCBI chr 2:216,938,884...217,007,167
Ensembl chr 2:214,264,483...214,332,660
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B3galt4 |
Beta-1,3-galactosyltransferase 4 |
involved_in |
ISO IEA |
(PMID:9582303) GO_REF:0000107 |
RGD Ensembl |
PMID:9582303 |
GO_REF:0000107 |
NCBI chr20:4,936,089...4,937,664
Ensembl chr20:4,931,768...4,938,315
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B4galnt1 |
beta-1,4-N-acetyl-galactosaminyl transferase 1 |
involved_in acts_upstream_of_or_within |
ISS ISO IBA IEA IDA |
GO_REF:0000024 (PMID:8855236) MGI:2158349|MGI:96074 (PMID:10021458) GO_REF:0000033 GO_REF:0000107 PMID:3140234 (PMID:1601877), (PMID:7487055), (PMID:7890749) |
UniProt RGD GO_Central Ensembl |
PMID:1601877 PMID:7487055 PMID:7890749 PMID:8855236 PMID:10021458 PMID:3140234 More...
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GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:21201261 |
NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190
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Rps18 |
ribosomal protein S18 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr20:4,931,427...4,935,538
Ensembl chr20:4,931,768...4,938,315
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St6galnac3 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:242,129,755...242,645,120
Ensembl chr 2:242,129,763...242,645,133
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St6galnac4 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 3:15,872,230...15,885,250
Ensembl chr 3:15,872,532...15,885,243
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St6galnac5 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:244,398,604...244,571,100
Ensembl chr 2:241,742,688...241,911,208
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St6galnac6 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:10702226) |
GO_Central RGD |
PMID:10702226 |
GO_REF:0000033 |
NCBI chr 3:15,894,275...15,907,502
Ensembl chr 3:15,885,968...15,907,496
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St8sia2 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 |
involved_in |
ISO |
(PMID:10766765) |
RGD |
PMID:10766765 |
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NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091
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St8sia3 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 |
involved_in |
ISO |
(PMID:10766765) (PMID:7782326) |
RGD |
PMID:7782326 PMID:10766765 |
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NCBI chr18:57,754,349...57,760,839
Ensembl chr18:57,754,347...57,760,839
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St8sia4 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 |
involved_in |
ISO |
(PMID:10766765) |
RGD |
PMID:10766765 |
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NCBI chr 9:103,437,479...103,532,008
Ensembl chr 9:95,993,503...96,084,653
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St8sia6 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 |
involved_in |
ISO |
(PMID:11980897) |
RGD |
PMID:11980897 |
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NCBI chr17:76,740,755...76,884,178
Ensembl chr17:76,745,224...76,884,299
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B4galt5 |
beta-1,4-galactosyltransferase 5 |
involved_in |
ISO |
(PMID:30114188) |
RGD |
PMID:30114188 |
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NCBI chr 3:176,437,073...176,453,001
Ensembl chr 3:156,018,053...156,070,074
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B4galt6 |
beta-1,4-galactosyltransferase 6 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:30114188) |
UniProt RGD |
PMID:30114188 |
GO_REF:0000024 |
NCBI chr18:12,233,350...12,290,204
Ensembl chr18:11,958,390...12,015,247
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G |
C3h20orf173 |
similar to human chromosome 20 open reading frame 173 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:144,514,060...144,524,979
Ensembl chr 3:144,519,930...144,524,920
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G |
St3gal1 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 1 |
involved_in |
ISO IBA |
(PMID:8027041) (PMID:8144500) GO_REF:0000033 |
RGD GO_Central |
PMID:8027041 PMID:8144500 |
GO_REF:0000033 |
NCBI chr 7:100,734,300...100,802,443
Ensembl chr 7:98,845,270...98,913,236
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G |
St3gal2 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 2 |
involved_in |
IDA ISO IBA IEA |
PMID:8144500 (PMID:22735313), (PMID:8144500) GO_REF:0000033 GO_REF:0000117 (PMID:8920913) |
RGD GO_Central UniProt |
PMID:8144500 PMID:8920913 PMID:22735313 PMID:8144500 |
GO_REF:0000033 GO_REF:0000117, RGD:68307 |
NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
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G |
St3gal3 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 3 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:22735313) |
Ensembl RGD |
PMID:22735313 |
GO_REF:0000107 |
NCBI chr 5:131,470,348...131,670,794
Ensembl chr 5:131,470,348...131,670,810
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G |
A4galt |
alpha 1,4-galactosyltransferase |
acts_upstream_of_or_within |
ISO |
MGI:3624807|MGI:5445373 (PMID:16476743), (PMID:22875802) |
RGD |
PMID:16476743 PMID:22875802 |
|
NCBI chr 7:116,248,571...116,272,917
Ensembl chr 7:114,368,276...114,396,071
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G |
St3gal2 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 2 |
involved_in |
ISO IEA ISS |
(PMID:12716912) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:12716912 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
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G |
Fa2h |
fatty acid 2-hydroxylase |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21628453) |
UniProt RGD |
PMID:21628453 |
GO_REF:0000024 |
NCBI chr19:56,222,240...56,273,480
Ensembl chr19:39,312,906...39,364,153
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|
G |
Ugcg |
UDP-glucose ceramide glucosyltransferase |
involved_in |
ISO IBA ISS |
(PMID:8643456) (PMID:10430909), (PMID:16109770), (PMID:22851168), (PMID:23748427) GO_REF:0000033 GO_REF:0000024 |
RGD GO_Central UniProt |
PMID:8643456 PMID:10430909 PMID:16109770 PMID:22851168 PMID:23748427 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 5:78,828,006...78,860,725
Ensembl chr 5:74,032,978...74,065,393
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G |
Gal3st2 |
galactose-3-O-sulfotransferase 2 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 9:94,382,456...94,387,990
Ensembl chr 9:94,376,174...94,389,174
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G |
Gal3st3 |
galactose-3-O-sulfotransferase 3 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:212,022,989...212,032,802
Ensembl chr 1:202,593,692...202,603,445
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G |
Gal3st4 |
galactose-3-O-sulfotransferase 4 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr12:17,267,963...17,276,951
Ensembl chr12:17,267,963...17,276,833
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G |
Sccpdh |
saccharopine dehydrogenase (putative) |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr13:91,400,120...91,421,875
Ensembl chr13:91,400,190...91,422,222
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G |
St3gal2 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 2 |
involved_in |
ISO |
(PMID:9266697) |
RGD |
PMID:9266697 |
|
NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
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G |
St3gal4 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 4 |
involved_in |
ISO IBA |
(PMID:8288606) GO_REF:0000033 |
RGD GO_Central |
PMID:8288606 |
GO_REF:0000033 |
NCBI chr 8:41,673,510...41,723,158
Ensembl chr 8:33,415,671...33,524,389
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G |
St3gal6 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 6 |
involved_in |
ISS IBA ISO IEA |
GO_REF:0000024 GO_REF:0000033 (PMID:10206952) GO_REF:0000107 |
UniProt GO_Central RGD Ensembl |
PMID:10206952 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr11:55,530,120...55,590,950
Ensembl chr11:42,077,621...42,121,776
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G |
St8sia6 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 |
acts_upstream_of_or_within |
ISO |
(PMID:11980897) |
RGD |
PMID:11980897 |
|
NCBI chr17:76,740,755...76,884,178
Ensembl chr17:76,745,224...76,884,299
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G |
A3galt2 |
alpha 1,3-galactosyltransferase 2 |
acts_upstream_of_or_within involved_in |
IDA ISO |
MGI:1347344|MGI:3512453 (PMID:22875802) PMID:10854427 PMID:12626403 |
RGD |
PMID:22875802 PMID:10854427 PMID:10854427 PMID:12626403 |
RGD:1299594, RGD:1299594, RGD:632674 |
NCBI chr 5:141,101,329...141,113,760
Ensembl chr 5:141,107,983...141,115,641
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G |
A4galt |
alpha 1,4-galactosyltransferase |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:116,248,571...116,272,917
Ensembl chr 7:114,368,276...114,396,071
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|
G |
B4galnt1 |
beta-1,4-N-acetyl-galactosaminyl transferase 1 |
involved_in |
IDA |
PMID:1606358 |
UniProt |
PMID:1606358 |
RGD:21201272 |
NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190
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|
G |
B4galt6 |
beta-1,4-galactosyltransferase 6 |
involved_in |
IDA IBA |
GO_REF:0000033 |
GO_Central RGD |
PMID:9593693 |
GO_REF:0000033, RGD:70807 |
NCBI chr18:12,233,350...12,290,204
Ensembl chr18:11,958,390...12,015,247
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|
G |
Fut4 |
fucosyltransferase 4 |
involved_in |
ISO ISS |
(PMID:29593094) GO_REF:0000024 |
RGD UniProt |
PMID:29593094 |
GO_REF:0000024 |
NCBI chr 8:19,868,178...19,872,139
Ensembl chr 8:11,586,721...11,590,682
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|
G |
Fut4-ps1 |
fucosyltransferase 4, pseudogene 1 |
involved_in |
ISO |
(PMID:29593094) |
RGD |
PMID:29593094 |
|
NCBI chr 9:1,656,732...1,659,085
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|
G |
Fut9 |
fucosyltransferase 9 |
involved_in |
ISO ISS |
(PMID:29593094) GO_REF:0000024 |
RGD UniProt |
PMID:29593094 |
GO_REF:0000024 |
NCBI chr 5:39,351,815...39,565,256
Ensembl chr 5:39,351,819...39,565,130
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|
G |
St6galnac5 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 |
involved_in |
ISO |
(PMID:10521438) |
RGD |
PMID:10521438 |
|
NCBI chr 2:244,398,604...244,571,100
Ensembl chr 2:241,742,688...241,911,208
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G |
St8sia5 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 |
involved_in |
IDA |
PMID:1606358 |
UniProt |
PMID:1606358 |
RGD:21201272 |
NCBI chr18:73,010,235...73,072,984
Ensembl chr18:70,736,602...70,797,789
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G |
Tm9sf2 |
transmembrane 9 superfamily member 2 |
involved_in |
ISO |
(PMID:30660999) |
RGD |
PMID:30660999 |
|
NCBI chr15:105,606,082...105,660,715
Ensembl chr15:99,201,489...99,254,049
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G |
Ugt8 |
UDP glycosyltransferase 8 |
|
TAS |
|
RGD |
PMID:7521399 |
RGD:70050 |
NCBI chr 2:216,938,884...217,007,167
Ensembl chr 2:214,264,483...214,332,660
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G |
AABR07038703.1 |
|
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
Ensembl chr X:54,564,018...54,565,271
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G |
Cwh43 |
cell wall biogenesis 43 C-terminal homolog |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:34,754,279...34,800,530
Ensembl chr14:34,754,289...34,800,814
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G |
Dpm1 |
dolichyl-phosphate mannosyltransferase subunit 1, catalytic |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:10835346), (PMID:9535917) (PMID:9535917) GO_REF:0000033 (PMID:9535917), (PMID:9724629) |
RGD GO_Central |
PMID:9535917 PMID:9724629 PMID:10835346 |
GO_REF:0000033 |
NCBI chr 3:177,338,855...177,358,398
Ensembl chr 3:156,919,979...156,939,536
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G |
Dpm2 |
dolichyl-phosphate mannosyltransferase subunit 2, regulatory |
involved_in acts_upstream_of_or_within |
TAS IBA IEA ISO IDA |
GO_REF:0000033 GO_REF:0000107 (PMID:10835346), (PMID:16162815) PMID:9724629 |
GO_Central Ensembl RGD |
PMID:10835346 PMID:16162815 PMID:9724629 PMID:9724629 |
GO_REF:0000033 GO_REF:0000107, RGD:69827, RGD:69827 |
NCBI chr 3:15,855,952...15,858,867
Ensembl chr 3:15,856,182...15,869,165 Ensembl chr 3:15,856,182...15,869,165
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G |
Dpm3 |
dolichyl-phosphate mannosyltransferase subunit 3, regulatory |
involved_in |
ISO IBA |
(PMID:10835346) GO_REF:0000033 |
RGD GO_Central |
PMID:10835346 |
GO_REF:0000033 |
NCBI chr 2:176,974,290...176,974,805
Ensembl chr 2:174,676,363...174,677,668 Ensembl chr15:174,676,363...174,677,668
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G |
Gpaa1 |
glycosylphosphatidylinositol anchor attachment 1 |
|
TAS |
|
RGD |
PMID:10702226 |
RGD:1331364 |
NCBI chr 7:108,051,896...108,055,479
Ensembl chr 7:108,051,861...108,055,484
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G |
Mppe1 |
metallophosphoesterase 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000043 (PMID:29374258) |
UniProt RGD |
PMID:29374258 |
GO_REF:0000024 GO_REF:0000043 |
NCBI chr18:63,033,329...63,051,461
Ensembl chr18:60,763,419...60,781,553
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G |
Pgap1 |
post-GPI attachment to proteins inositol deacylase 1 |
involved_in |
IMP IBA |
GO_REF:0000033 |
GO_Central RGD |
PMID:14734546 |
GO_REF:0000033, RGD:1303970 |
NCBI chr 9:63,470,023...63,538,772
Ensembl chr 9:55,975,667...56,044,464
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G |
Pgap2 |
post-GPI attachment to proteins 2 |
involved_in |
IMP ISO ISS IBA IEA |
PMID:16407401 (PMID:23561846), (PMID:29374258) GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 |
RGD UniProt GO_Central |
PMID:23561846 PMID:29374258 PMID:16407401 PMID:29374258 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000043, RGD:8553507, RGD:596936197 |
NCBI chr 1:166,003,593...166,030,088
Ensembl chr 1:156,591,615...156,618,114
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G |
Pgap3 |
post-GPI attachment to proteins phospholipase 3 |
involved_in |
ISO |
(PMID:29374258) |
RGD |
PMID:29374258 |
|
NCBI chr10:83,387,113...83,399,357
Ensembl chr10:83,387,113...83,398,628
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G |
Pgap4 |
post-GPI attachment to proteins GalNAc transferase 4 |
involved_in |
ISS IBA ISO |
GO_REF:0000024 GO_REF:0000033 (PMID:29374258) |
UniProt GO_Central RGD |
PMID:29374258 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 5:63,931,916...63,947,004
Ensembl chr 5:63,930,682...63,951,716
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G |
Piga |
phosphatidylinositol glycan anchor biosynthesis, class A |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000041 MGI:3652879 (PMID:8611683) GO_REF:0000033 |
UniProt RGD GO_Central |
PMID:8611683 |
GO_REF:0000033 GO_REF:0000041 |
NCBI chr X:33,672,832...33,687,747
Ensembl chr X:30,042,343...30,055,804
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G |
Pigb |
phosphatidylinositol glycan anchor biosynthesis, class B |
involved_in |
ISO IBA |
(PMID:8861954) GO_REF:0000033 |
RGD GO_Central |
PMID:8861954 |
GO_REF:0000033 |
NCBI chr 8:73,751,756...73,775,679
Ensembl chr 8:73,751,798...73,775,679
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G |
Pigc |
phosphatidylinositol glycan anchor biosynthesis, class C |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000041 (PMID:16162815), (PMID:27694521) |
UniProt RGD |
PMID:16162815 PMID:27694521 |
GO_REF:0000024 GO_REF:0000041 |
NCBI chr13:76,876,894...76,879,420
Ensembl chr13:74,296,854...74,346,211
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G |
Pigf |
phosphatidylinositol glycan anchor biosynthesis, class F |
involved_in |
ISO IBA IEA |
(PMID:33386993) GO_REF:0000033 (PMID:10781593) GO_REF:0000041 |
RGD GO_Central UniProt |
PMID:10781593 PMID:33386993 |
GO_REF:0000033 GO_REF:0000041 |
NCBI chr 6:7,589,584...7,617,719
Ensembl chr 6:7,589,570...7,639,675
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G |
Pigg |
phosphatidylinositol glycan anchor biosynthesis, class G |
acts_upstream_of_or_within involved_in |
ISO IBA IEA |
(PMID:15632136) GO_REF:0000033 GO_REF:0000041 |
RGD GO_Central UniProt |
PMID:15632136 |
GO_REF:0000033 GO_REF:0000041 |
NCBI chr14:1,404,911...1,433,199
Ensembl chr14:1,406,798...1,433,187
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G |
Pigh |
phosphatidylinositol glycan anchor biosynthesis, class H |
involved_in |
ISO IBA IEA |
(PMID:16162815) GO_REF:0000033 GO_REF:0000041 |
RGD GO_Central UniProt |
PMID:16162815 |
GO_REF:0000033 GO_REF:0000041 |
NCBI chr 6:103,601,369...103,630,214
Ensembl chr 6:97,882,903...97,897,142
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G |
Pigk |
phosphatidylinositol glycan anchor biosynthesis, class K |
involved_in |
IEA |
GO_REF:0000041 |
UniProt |
|
GO_REF:0000041 |
NCBI chr 2:241,630,021...241,715,493
Ensembl chr 2:241,630,053...241,716,134
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G |
Pigl |
phosphatidylinositol glycan anchor biosynthesis, class L |
involved_in |
IDA IEA ISO |
PMID:10085243 GO_REF:0000041 (PMID:10085243) |
UniProt RGD |
PMID:10085243 PMID:9188481 PMID:10085243 |
GO_REF:0000041, RGD:729509, RGD:401901217 |
NCBI chr10:47,142,160...47,199,892
Ensembl chr10:47,141,780...47,200,145
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G |
Pigm |
phosphatidylinositol glycan anchor biosynthesis, class M |
involved_in |
IDA IBA IEA |
GO_REF:0000033 GO_REF:0000041 |
GO_Central UniProt RGD |
PMID:11226175 |
GO_REF:0000033 GO_REF:0000041, RGD:70624 |
NCBI chr13:87,370,693...87,374,390
Ensembl chr13:84,838,175...84,843,381
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G |
Pign |
phosphatidylinositol glycan anchor biosynthesis, class N |
involved_in |
IEA IBA |
GO_REF:0000041 GO_REF:0000033 |
UniProt GO_Central |
|
GO_REF:0000033 GO_REF:0000041 |
NCBI chr13:21,659,092...21,812,932
Ensembl chr13:21,662,455...21,806,790
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G |
Pigo |
phosphatidylinositol glycan anchor biosynthesis, class O |
involved_in |
IEA ISO IBA |
GO_REF:0000041 (PMID:10781593) GO_REF:0000033 |
UniProt RGD GO_Central |
PMID:10781593 |
GO_REF:0000033 GO_REF:0000041 |
NCBI chr 5:57,244,721...57,256,252
Ensembl chr 5:57,245,166...57,254,146
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G |
Pigp |
phosphatidylinositol glycan anchor biosynthesis, class P |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:16162815), (PMID:28334793) (PMID:10944123) GO_REF:0000033 |
RGD GO_Central |
PMID:10944123 PMID:16162815 PMID:28334793 |
GO_REF:0000033 |
NCBI chr11:33,682,943...33,689,111
Ensembl chr11:33,682,948...33,689,321
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G |
Pigq |
phosphatidylinositol glycan anchor biosynthesis, class Q |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:16162815) PomBase:SPBC30D10.11|SGD:S000003448 (PMID:10373468), (PMID:9729469) GO_REF:0000033 |
RGD GO_Central |
PMID:9729469 PMID:10373468 PMID:16162815 |
GO_REF:0000033 |
NCBI chr10:14,942,571...14,958,584
Ensembl chr10:14,942,577...14,958,584
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G |
Pigs |
phosphatidylinositol glycan anchor biosynthesis, class S |
involved_in |
IEA |
GO_REF:0000041 |
UniProt |
|
GO_REF:0000041 |
NCBI chr10:63,222,611...63,237,190
Ensembl chr10:63,222,572...63,237,187
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G |
Pigu |
phosphatidylinositol glycan anchor biosynthesis, class U |
involved_in |
ISO IEA |
(PMID:15034568) GO_REF:0000041 |
RGD UniProt |
PMID:15034568 |
GO_REF:0000041 |
NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807
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G |
Pigv |
phosphatidylinositol glycan anchor biosynthesis, class V |
involved_in |
ISO IBA IEA |
UniProtKB:P38211 (PMID:15623507), (PMID:15720390) GO_REF:0000033 GO_REF:0000041 |
RGD GO_Central UniProt |
PMID:15623507 PMID:15720390 |
GO_REF:0000033 GO_REF:0000041 |
NCBI chr 5:145,889,642...145,901,533
Ensembl chr 5:145,889,646...145,901,533
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G |
Pigw |
phosphatidylinositol glycan anchor biosynthesis, class W |
involved_in |
IEA IBA |
GO_REF:0000041 GO_REF:0000033 |
UniProt GO_Central |
|
GO_REF:0000033 GO_REF:0000041 |
NCBI chr10:70,246,904...70,248,412
Ensembl chr10:69,748,789...69,790,475
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G |
Pigx |
phosphatidylinositol glycan anchor biosynthesis, class X |
involved_in |
IEA |
GO_REF:0000041 |
UniProt |
|
GO_REF:0000041 |
NCBI chr11:68,687,126...68,703,067
Ensembl chr11:68,687,093...68,703,472
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G |
Pigy |
phosphatidylinositol glycan anchor biosynthesis, class Y |
acts_upstream_of_or_within |
ISO |
(PMID:16162815) |
RGD |
PMID:16162815 |
|
NCBI chr 8:20,689,621...20,691,863
Ensembl chr 8:20,689,502...20,692,585
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|
G |
Pigz |
phosphatidylinositol glycan anchor biosynthesis, class Z |
involved_in |
ISO |
UniProtKB:Q04174 (PMID:15208306) |
RGD |
PMID:15208306 |
|
NCBI chr11:82,336,821...82,357,743
|
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G |
Slc30a5 |
solute carrier family 30 member 5 |
acts_upstream_of_positive_effect |
ISO |
(PMID:35525268) |
RGD |
PMID:35525268 |
|
NCBI chr 2:33,679,800...33,710,025
Ensembl chr 2:31,945,729...31,975,934
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|
|
G |
B4galt4 |
beta-1,4-galactosyltransferase 4 |
involved_in |
ISO ISS |
(PMID:9792633) GO_REF:0000024 |
RGD UniProt |
PMID:9792633 |
GO_REF:0000024 |
NCBI chr11:61,995,807...62,021,751
Ensembl chr11:61,995,814...62,021,671
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G |
B4galt6 |
beta-1,4-galactosyltransferase 6 |
involved_in |
ISO |
(PMID:10320813) |
RGD |
PMID:10320813 |
|
NCBI chr18:12,233,350...12,290,204
Ensembl chr18:11,958,390...12,015,247
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|
|
G |
Ormdl1 |
ORMDL sphingolipid biosynthesis regulator 1 |
acts_upstream_of_or_within |
ISO |
(PMID:25691431) |
RGD |
PMID:25691431 |
|
NCBI chr 9:55,735,081...55,745,287
Ensembl chr 9:48,237,572...48,253,211
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|
G |
Ormdl2 |
ORMDL sphingolipid biosynthesis regulator 2 |
acts_upstream_of_or_within |
ISO |
(PMID:25691431) |
RGD |
PMID:25691431 |
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NCBI chr 7:1,832,368...1,835,501
Ensembl chr 7:1,246,479...1,250,907
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Ormdl3 |
ORMDL sphingolipid biosynthesis regulator 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:25691431) |
Ensembl RGD |
PMID:25691431 |
GO_REF:0000107 |
NCBI chr10:84,086,317...84,092,673
Ensembl chr10:83,590,071...83,598,620
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Sphk1 |
sphingosine kinase 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:16118219) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:16118219 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:102,257,413...102,263,086
Ensembl chr10:101,758,711...101,764,240
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Abca2 |
ATP binding cassette subfamily A member 2 |
involved_in |
ISO IEA IMP |
(PMID:24201375) GO_REF:0000107 |
RGD Ensembl |
PMID:24201375 PMID:24201375 |
GO_REF:0000107, RGD:14697729 |
NCBI chr 3:28,642,660...28,662,689
Ensembl chr 3:8,244,639...8,264,537
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Atg7 |
autophagy related 7 |
acts_upstream_of_or_within |
ISO |
MGI:2176073|MGI:3587769 (PMID:25332431) |
RGD |
PMID:25332431 |
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NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593
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Pnpla1 |
patatin-like phospholipase domain containing 1 |
involved_in |
ISO |
(PMID:28248318) (PMID:28248300) |
RGD |
PMID:28248300 PMID:28248318 |
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NCBI chr20:6,919,689...6,953,850
Ensembl chr20:6,917,931...6,952,375
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Acer3 |
alkaline ceramidase 3 |
involved_in |
ISO IBA |
(PMID:11356846), (PMID:20068046) GO_REF:0000033 |
RGD GO_Central |
PMID:11356846 PMID:20068046 |
GO_REF:0000033 |
NCBI chr 1:161,915,397...162,017,802
Ensembl chr 1:152,504,186...152,606,591
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Ccn1 |
cellular communication network factor 1 |
acts_upstream_of_or_within |
ISO |
(PMID:19364818) |
RGD |
PMID:19364818 |
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NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:234,562,408...234,565,484
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G |
Enpp7 |
ectonucleotide pyrophosphatase/phosphodiesterase 7 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21177474) |
UniProt RGD |
PMID:21177474 |
GO_REF:0000024 |
NCBI chr10:104,740,763...104,745,760
Ensembl chr10:104,242,223...104,246,589
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Pla2g6 |
phospholipase A2 group VI |
involved_in |
IDA IBA |
GO_REF:0000033 |
GO_Central RGD |
PMID:18936091 |
GO_REF:0000033, RGD:6482750 |
NCBI chr 7:112,731,803...112,771,978
Ensembl chr 7:110,851,378...110,891,114
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G |
Prkcd |
protein kinase C, delta |
involved_in |
ISO IEA |
(PMID:19279011) GO_REF:0000107 |
RGD Ensembl |
PMID:19279011 |
GO_REF:0000107 |
NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,769,215...5,799,352
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G |
Sirt3 |
sirtuin 3 |
involved_in |
ISO |
(PMID:26620563) |
RGD |
PMID:26620563 |
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NCBI chr 1:205,371,703...205,394,145
Ensembl chr 1:195,942,073...195,964,808
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G |
Smpd3 |
sphingomyelin phosphodiesterase 3 |
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IMP |
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RGD |
PMID:20096352 |
RGD:10041064 |
NCBI chr19:51,072,209...51,155,639
Ensembl chr19:34,162,341...34,245,749
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G |
Sphk2 |
sphingosine kinase 2 |
involved_in |
ISO |
(PMID:16118219) |
RGD |
PMID:16118219 |
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NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:96,180,887...96,188,391
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G |
Znf750 |
zinc finger protein 750 |
acts_upstream_of_or_within |
ISO |
MGI:7470773 (PMID:37115925) |
RGD |
PMID:37115925 |
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NCBI chr10:107,270,926...107,279,904
Ensembl chr10:106,772,669...106,781,200
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G |
ENSRNOG00000068509 |
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involved_in |
IEA |
GO_REF:0000117 |
UniProt |
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GO_REF:0000117 |
Ensembl chr17:11,942,344...11,942,538
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G |
Ormdl1 |
ORMDL sphingolipid biosynthesis regulator 1 |
acts_upstream_of |
ISO |
MGI:1913862 (PMID:31880535) |
RGD |
PMID:31880535 |
|
NCBI chr 9:55,735,081...55,745,287
Ensembl chr 9:48,237,572...48,253,211
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G |
Ormdl3 |
ORMDL sphingolipid biosynthesis regulator 3 |
acts_upstream_of |
ISO |
MGI:2137691|MGI:2181669|MGI:6382064 (PMID:31880535) |
RGD |
PMID:31880535 |
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NCBI chr10:84,086,317...84,092,673
Ensembl chr10:83,590,071...83,598,620
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G |
Paqr4 |
progestin and adipoQ receptor family member 4 |
involved_in |
ISO |
(PMID:32291319), (PMID:38961186) |
RGD |
PMID:32291319 PMID:38961186 |
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NCBI chr10:12,758,970...12,762,649
Ensembl chr10:12,758,972...12,762,584
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G |
Prkcd |
protein kinase C, delta |
involved_in |
ISO ISS |
(PMID:17303575) GO_REF:0000024 |
RGD UniProt |
PMID:17303575 |
GO_REF:0000024 |
NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,769,215...5,799,352
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G |
Samd8 |
sterile alpha motif domain containing 8 |
involved_in |
ISO |
(PMID:19506037) |
RGD |
PMID:19506037 |
|
NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379 Ensembl chr15:2,512,105...2,515,379
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G |
Ormdl1 |
ORMDL sphingolipid biosynthesis regulator 1 |
acts_upstream_of |
ISO |
MGI:1913862 (PMID:31880535) |
RGD |
PMID:31880535 |
|
NCBI chr 9:55,735,081...55,745,287
Ensembl chr 9:48,237,572...48,253,211
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G |
Ormdl3 |
ORMDL sphingolipid biosynthesis regulator 3 |
acts_upstream_of |
ISO |
MGI:2137691|MGI:2181669|MGI:2445707|MGI:6343506|MGI:6382064 (PMID:28275141), (PMID:31880535) |
RGD |
PMID:28275141 PMID:31880535 |
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NCBI chr10:84,086,317...84,092,673
Ensembl chr10:83,590,071...83,598,620
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G |
Sptlc1 |
serine palmitoyltransferase, long chain base subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:3815115 (PMID:19416652) |
RGD |
PMID:19416652 |
|
NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
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G |
Sptlc2 |
serine palmitoyltransferase, long chain base subunit 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:9363775) |
Ensembl RGD |
PMID:9363775 |
GO_REF:0000107 |
NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:106,950,949...107,031,542
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G |
Sphk2 |
sphingosine kinase 2 |
involved_in |
ISO |
(PMID:10751414), (PMID:19729656) |
RGD |
PMID:10751414 PMID:19729656 |
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NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:96,180,887...96,188,391
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G |
Sptlc3 |
serine palmitoyltransferase, long chain base subunit 3 |
acts_upstream_of_or_within |
ISO |
(PMID:19648650) |
RGD |
PMID:19648650 |
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NCBI chr 3:126,847,878...126,978,010
Ensembl chr 3:126,847,878...126,978,010
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G |
Acer1 |
alkaline ceramidase 1 |
involved_in |
ISO |
(PMID:17713573) |
RGD |
PMID:17713573 |
|
NCBI chr 9:1,881,361...1,911,439
Ensembl chr 9:1,793,139...1,824,434
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G |
Atg7 |
autophagy related 7 |
acts_upstream_of |
ISO |
MGI:2176073|MGI:3587769 (PMID:25332431) |
RGD |
PMID:25332431 |
|
NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593
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G |
Cerkl |
CERK like autophagy regulator |
acts_upstream_of_or_within |
ISO |
MGI:5461515 (PMID:23501591) |
RGD |
PMID:23501591 |
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NCBI chr 3:64,238,714...64,344,695
Ensembl chr 3:64,237,522...64,340,675
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G |
Cers1 |
ceramide synthase 1 |
involved_in |
ISO |
(PMID:12105227) |
RGD |
PMID:12105227 |
|
NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
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G |
Cers2 |
ceramide synthase 2 |
acts_upstream_of_or_within |
ISO |
(PMID:15823095) |
RGD |
PMID:15823095 |
|
NCBI chr 2:185,579,511...185,587,789
Ensembl chr 2:182,890,493...182,933,314
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G |
Cers3 |
ceramide synthase 3 |
acts_upstream_of_or_within |
ISO |
(PMID:16753040) |
RGD |
PMID:16753040 |
|
NCBI chr 1:129,728,136...129,833,182
Ensembl chr 1:120,318,212...120,422,902
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G |
Cers4 |
ceramide synthase 4 |
acts_upstream_of_or_within |
ISO |
(PMID:15823095) |
RGD |
PMID:15823095 |
|
NCBI chr12:7,649,610...7,688,066
Ensembl chr12:2,851,784...2,886,828
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G |
Cers5 |
ceramide synthase 5 |
acts_upstream_of_or_within |
ISO |
(PMID:15823095) |
RGD |
PMID:15823095 |
|
NCBI chr 7:132,738,834...132,776,920
Ensembl chr 7:130,859,990...130,897,947
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G |
Cers6 |
ceramide synthase 6 |
acts_upstream_of_or_within |
ISO |
(PMID:15823095) |
RGD |
PMID:15823095 |
|
NCBI chr 3:74,038,520...74,287,544
Ensembl chr 3:53,630,959...53,876,848
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G |
Degs2 |
delta(4)-desaturase, sphingolipid 2 |
acts_upstream_of_or_within |
ISO |
SGD:S000002705 (PMID:11937514) |
RGD |
PMID:11937514 |
|
NCBI chr 6:127,596,063...127,613,293
Ensembl chr 6:127,596,071...127,613,293
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G |
Elovl1 |
ELOVL fatty acid elongase 1 |
involved_in |
ISO IBA |
(PMID:20937905) (PMID:20253178) GO_REF:0000033 |
RGD GO_Central |
PMID:20253178 PMID:20937905 |
GO_REF:0000033 |
NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
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G |
Elovl2 |
ELOVL fatty acid elongase 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr17:23,750,350...23,790,601
Ensembl chr17:23,544,568...23,584,848
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G |
Elovl3 |
ELOVL fatty acid elongase 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
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G |
Elovl4 |
ELOVL fatty acid elongase 4 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
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G |
Elovl5 |
ELOVL fatty acid elongase 5 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284
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G |
Elovl6 |
ELOVL fatty acid elongase 6 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:220,738,095...220,845,528
Ensembl chr 2:218,063,804...218,171,186
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G |
Elovl7 |
ELOVL fatty acid elongase 7 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
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G |
Hacd1 |
3-hydroxyacyl-CoA dehydratase 1 |
involved_in |
ISO IBA |
UniProtKB:P40857 (PMID:18554506) GO_REF:0000033 |
RGD GO_Central |
PMID:18554506 |
GO_REF:0000033 |
NCBI chr17:81,992,284...82,014,676
Ensembl chr17:77,083,740...77,106,073
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G |
Hacd2 |
3-hydroxyacyl-CoA dehydratase 2 |
involved_in |
ISO IBA |
UniProtKB:P40857 (PMID:18554506) GO_REF:0000033 |
RGD GO_Central |
PMID:18554506 |
GO_REF:0000033 |
NCBI chr11:65,667,671...65,762,903
Ensembl chr11:65,670,281...65,762,889
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G |
Hacd3 |
3-hydroxyacyl-CoA dehydratase 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:74,396,441...74,433,700
Ensembl chr 8:65,501,240...65,538,507
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G |
Hacd4 |
3-hydroxyacyl-CoA dehydratase 4 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:102,887,597...102,915,376
Ensembl chr 5:102,887,588...102,915,338
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G |
Kdsr |
3-ketodihydrosphingosine reductase |
acts_upstream_of_or_within involved_in |
ISO IBA |
SGD:S000000469 (PMID:15328338) GO_REF:0000033 (PMID:19141869) |
RGD GO_Central |
PMID:15328338 PMID:19141869 |
GO_REF:0000033 |
NCBI chr13:23,374,101...23,408,779
Ensembl chr13:22,862,117...22,894,108
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G |
Ormdl1 |
ORMDL sphingolipid biosynthesis regulator 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 9:55,735,081...55,745,287
Ensembl chr 9:48,237,572...48,253,211
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G |
Ormdl2 |
ORMDL sphingolipid biosynthesis regulator 2 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:1,832,368...1,835,501
Ensembl chr 7:1,246,479...1,250,907
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G |
Ormdl3 |
ORMDL sphingolipid biosynthesis regulator 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:84,086,317...84,092,673
Ensembl chr10:83,590,071...83,598,620
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G |
Sptlc1 |
serine palmitoyltransferase, long chain base subunit 1 |
acts_upstream_of_or_within |
ISO |
(PMID:25332431) |
RGD |
PMID:25332431 |
|
NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
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G |
Sptlc2 |
serine palmitoyltransferase, long chain base subunit 2 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:28698261) (PMID:25332431) (PMID:26573920) |
UniProt RGD |
PMID:25332431 PMID:26573920 PMID:28698261 |
GO_REF:0000024 |
NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:106,950,949...107,031,542
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G |
Sptssb |
serine palmitoyltransferase, small subunit B |
acts_upstream_of_or_within |
ISO |
MGI:5689843 (PMID:26438849) |
RGD |
PMID:26438849 |
|
NCBI chr 2:154,133,728...154,162,127
Ensembl chr 2:154,133,733...154,163,120
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G |
Abca8 |
ATP binding cassette subfamily A member 8 |
involved_in |
ISO |
(PMID:23560799) |
RGD |
PMID:23560799 |
|
NCBI chr10:95,416,984...95,490,647
Ensembl chr10:94,917,520...94,990,988
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G |
Ormdl1 |
ORMDL sphingolipid biosynthesis regulator 1 |
acts_upstream_of |
ISO |
MGI:1913862 (PMID:31880535) |
RGD |
PMID:31880535 |
|
NCBI chr 9:55,735,081...55,745,287
Ensembl chr 9:48,237,572...48,253,211
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G |
Ormdl3 |
ORMDL sphingolipid biosynthesis regulator 3 |
involved_in acts_upstream_of |
IEA ISO |
GO_REF:0000107 MGI:2137691|MGI:2181669|MGI:6382064 (PMID:31880535) |
Ensembl RGD |
PMID:31880535 |
GO_REF:0000107 |
NCBI chr10:84,086,317...84,092,673
Ensembl chr10:83,590,071...83,598,620
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|
G |
Osbp |
oxysterol binding protein |
involved_in |
ISO |
(PMID:12023275) |
RGD |
PMID:12023275 |
|
NCBI chr 1:218,313,455...218,343,263
Ensembl chr 1:208,887,895...208,918,506
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G |
Pemt |
phosphatidylethanolamine N-methyltransferase |
acts_upstream_of_or_within |
ISO |
(PMID:25667419) |
RGD |
PMID:25667419 |
|
NCBI chr10:45,275,434...45,349,651
Ensembl chr10:44,775,911...44,850,013
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G |
Sgms1 |
sphingomyelin synthase 1 |
involved_in |
ISO IBA ISS |
(PMID:14685263), (PMID:14976195), (PMID:17982138) (PMID:27892528) GO_REF:0000033 GO_REF:0000024 |
RGD GO_Central HGNC-UCL |
PMID:14685263 PMID:14976195 PMID:17982138 PMID:27892528 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 1:239,409,991...239,681,195
Ensembl chr 1:229,998,119...230,259,603
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G |
Sgms2 |
sphingomyelin synthase 2 |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000107 (PMID:27892528) (PMID:25667419) GO_REF:0000033 (PMID:14685263), (PMID:17982138) |
Ensembl RGD GO_Central |
PMID:14685263 PMID:17982138 PMID:25667419 PMID:27892528 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:222,567,661...222,641,804
Ensembl chr 2:219,893,572...219,967,546
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G |
Sptlc1 |
serine palmitoyltransferase, long chain base subunit 1 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:3815115 (PMID:16216550) (PMID:26301690) |
RGD |
PMID:16216550 PMID:26301690 |
|
NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
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G |
Sptlc2 |
serine palmitoyltransferase, long chain base subunit 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3815117 (PMID:16216550) |
Ensembl RGD |
PMID:16216550 |
GO_REF:0000107 |
NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:106,950,949...107,031,542
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G |
Vapa |
VAMP associated protein A |
involved_in |
ISO |
(PMID:12023275) |
RGD |
PMID:12023275 |
|
NCBI chr 9:112,624,791...112,654,731
Ensembl chr 9:105,177,907...105,207,847
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G |
Abca2 |
ATP binding cassette subfamily A member 2 |
acts_upstream_of_positive_effect involved_in |
ISO IEA |
(PMID:26510981) GO_REF:0000107 |
RGD Ensembl |
PMID:26510981 |
GO_REF:0000107 |
NCBI chr 3:28,642,660...28,662,689
Ensembl chr 3:8,244,639...8,264,537
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G |
Acer1 |
alkaline ceramidase 1 |
involved_in |
ISO IBA |
(PMID:17713573), (PMID:20207939), (PMID:20628055) (PMID:27126290), (PMID:29056331) GO_REF:0000033 |
RGD GO_Central |
PMID:17713573 PMID:20207939 PMID:20628055 PMID:27126290 PMID:29056331 |
GO_REF:0000033 |
NCBI chr 9:1,881,361...1,911,439
Ensembl chr 9:1,793,139...1,824,434
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|
G |
Acer2 |
alkaline ceramidase 2 |
involved_in |
ISO IBA |
(PMID:16940153), (PMID:20089856), (PMID:20207939), (PMID:20628055) (PMID:29401619) GO_REF:0000033 |
RGD GO_Central |
PMID:16940153 PMID:20089856 PMID:20207939 PMID:20628055 PMID:29401619 |
GO_REF:0000033 |
NCBI chr 5:106,437,773...106,488,572
Ensembl chr 5:101,391,885...101,442,614
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G |
Acer3 |
alkaline ceramidase 3 |
involved_in |
ISO |
(PMID:20068046), (PMID:20207939), (PMID:26792856) (PMID:26474409) |
RGD |
PMID:20068046 PMID:20207939 PMID:26474409 PMID:26792856 |
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NCBI chr 1:161,915,397...162,017,802
Ensembl chr 1:152,504,186...152,606,591
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G |
Agk |
acylglycerol kinase |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 4:70,081,550...70,160,642
Ensembl chr 4:69,114,269...69,193,934
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G |
Asah1 |
N-acylsphingosine amidohydrolase 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:9653654) (PMID:10610716), (PMID:12815059) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:9653654 PMID:10610716 PMID:12815059 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr16:57,669,927...57,701,349
Ensembl chr16:50,966,229...51,008,233
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G |
Asah2 |
N-acylsphingosine amidohydrolase 2 |
involved_in |
IDA ISO IBA |
PMID:10488143 (PMID:10652340), (PMID:16126722), (PMID:16380386) GO_REF:0000033 PMID:15123644 PMID:15217782 (PMID:30154232) |
RGD GO_Central |
PMID:10652340 PMID:16126722 PMID:16380386 PMID:30154232 PMID:10488143 PMID:15123644 PMID:15217782 More...
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GO_REF:0000033, RGD:13838800, RGD:13838793, RGD:13838794 |
NCBI chr 1:239,278,994...239,386,598
Ensembl chr 1:229,865,662...229,939,162
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G |
ENSRNOG00000069695 |
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involved_in |
IEA |
GO_REF:0000117 |
UniProt |
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GO_REF:0000117 |
Ensembl chr14:25,729,638...25,730,194
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G |
Gba1 |
glucosylceramidase beta 1 |
involved_in |
ISO |
(PMID:19279011) |
RGD |
PMID:19279011 |
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NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:174,609,403...174,618,263
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G |
Sphk1 |
sphingosine kinase 1 |
involved_in |
ISO IBA IEA |
UniProtKB:Q9NRA0 (PMID:23106337) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:23106337 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:102,257,413...102,263,086
Ensembl chr10:101,758,711...101,764,240
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G |
Sphk2 |
sphingosine kinase 2 |
involved_in |
ISO |
UniProtKB:Q9NYA1 (PMID:23106337) |
RGD |
PMID:23106337 |
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NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:96,180,887...96,188,391
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G |
Sptlc1 |
serine palmitoyltransferase, long chain base subunit 1 |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:19416851), (PMID:33558761) MGI:3815115 (PMID:16216550) GO_REF:0000033 |
RGD GO_Central |
PMID:16216550 PMID:19416851 PMID:33558761 |
GO_REF:0000033 |
NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
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G |
Sptlc2 |
serine palmitoyltransferase, long chain base subunit 2 |
involved_in acts_upstream_of_or_within |
ISO IBA IEA |
(PMID:19416851), (PMID:33558761) MGI:3815117 (PMID:16216550) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:16216550 PMID:19416851 PMID:33558761 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:106,950,949...107,031,542
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G |
Sptlc3 |
serine palmitoyltransferase, long chain base subunit 3 |
involved_in |
ISO IBA |
(PMID:19416851) GO_REF:0000033 |
RGD GO_Central |
PMID:19416851 |
GO_REF:0000033 |
NCBI chr 3:126,847,878...126,978,010
Ensembl chr 3:126,847,878...126,978,010
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G |
Sptssa |
serine palmitoyltransferase, small subunit A |
involved_in |
ISO |
(PMID:19416851), (PMID:33558761) |
RGD |
PMID:19416851 PMID:33558761 |
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NCBI chr 6:77,879,931...77,891,344
Ensembl chr 6:72,144,714...72,156,214
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G |
Sptssb |
serine palmitoyltransferase, small subunit B |
involved_in |
ISO |
(PMID:19416851) |
RGD |
PMID:19416851 |
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NCBI chr 2:154,133,728...154,162,127
Ensembl chr 2:154,133,733...154,163,120
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Term paths to the root
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