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ONTOLOGY REPORT - ANNOTATIONS


Term:D-amino acid metabolic process
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Accession:GO:0046416 term browser browse the term
Definition:The chemical reactions and pathways involving D-amino acids, the D-enantiomers of amino acids.
Synonyms:exact_synonym: D-amino acid metabolism


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D-alanine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:16616139), (PMID:20603179)
(MGI:MGI:5442503|PMID:20603179)
Ensembl
RGD
PMID:16616139, PMID:20603179, PMID:21873635 GO_REF:0000107, MGI:MGI:5442503, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
G Ddo D-aspartate oxidase ISO
IBA
(PMID:20603179)
PMID:21873635
(MGI:MGI:5442503|PMID:20603179)
RGD PMID:20603179, PMID:21873635 MGI:MGI:5442503, RGD:13792537 NCBI chr20:48,739,812...48,758,958
Ensembl chr20:48,739,639...48,758,905
JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase ISO
IBA
(PMID:11054547), (PMID:15193426)
(MGI:MGI:1347751|PMID:10557334), (MGI:MGI:1926659|PMID:11054547), (MGI:MGI:2183617|PMID:12021263), (MGI:MGI:3529732|PMID:15710237)
PMID:21873635
RGD PMID:10557334, PMID:11054547, PMID:12021263, PMID:15193426, PMID:15710237, PMID:21873635 MGI:MGI:1347751, MGI:MGI:1926659, MGI:MGI:2183617, MGI:MGI:3529732, RGD:13792537 NCBI chr10:61,756,138...61,772,327
Ensembl chr10:61,756,138...61,772,293
JBrowse link
D-serine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:18544534)
Ensembl
RGD
PMID:18544534, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
D-serine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase ISO (PMID:21679769) RGD PMID:21679769 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
G Srr serine racemase IDA
ISO
PMID:20106978
(PMID:20106978)
RGD PMID:20106978, PMID:20106978 RGD:8554326 NCBI chr10:61,756,138...61,772,327
Ensembl chr10:61,756,138...61,772,293
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      primary metabolic process 10920
        cellular amino acid metabolic process 276
          alpha-amino acid metabolic process 201
            D-amino acid metabolic process 3
              D-alanine metabolic process + 1
              D-amino acid biosynthetic process + 1
              D-amino acid catabolic process + 2
              D-arginine metabolic process 0
              D-cysteine metabolic process + 0
              D-glutamate metabolic process 0
              D-glutamine metabolic process 0
              D-leucine metabolic process + 0
              D-lysine metabolic process + 0
              D-ornithine metabolic process 0
              D-serine metabolic process + 2
              D-tyrosine metabolic process + 0
              D-valine metabolic process + 0
              octopine metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      cellular metabolic process 11085
        organic acid metabolic process 1095
          oxoacid metabolic process 1066
            carboxylic acid metabolic process 1009
              cellular amino acid metabolic process 276
                alpha-amino acid metabolic process 201
                  D-amino acid metabolic process 3
                    D-alanine metabolic process + 1
                    D-amino acid biosynthetic process + 1
                    D-amino acid catabolic process + 2
                    D-arginine metabolic process 0
                    D-cysteine metabolic process + 0
                    D-glutamate metabolic process 0
                    D-glutamine metabolic process 0
                    D-leucine metabolic process + 0
                    D-lysine metabolic process + 0
                    D-ornithine metabolic process 0
                    D-serine metabolic process + 2
                    D-tyrosine metabolic process + 0
                    D-valine metabolic process + 0
                    octopine metabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.