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ONTOLOGY REPORT - ANNOTATIONS


Term:D-amino acid metabolic process
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Accession:GO:0046416 term browser browse the term
Definition:The chemical reactions and pathways involving D-amino acids, the D-enantiomers of amino acids.
Synonyms:exact_synonym: D-amino acid metabolism



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D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in IBA
ISO
PMID:21873635
(MGI:5442503|PMID:20603179)
(PMID:16616139), (PMID:20603179)
RGD PMID:16616139 PMID:20603179 PMID:21873635 MGI:5442503, RGD:13792537 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741
JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IBA
IEA
(PMID:2572224)
PMID:21873635
GO_REF:0000117
RGD
UniProt
PMID:2572224 PMID:21873635 GO_REF:0000117, RGD:13792537 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741
JBrowse link
G Ddo D-aspartate oxidase involved_in IBA
ISO
PMID:21873635
(MGI:5442503|PMID:20603179)
(PMID:20603179)
RGD PMID:20603179 PMID:21873635 MGI:5442503, RGD:13792537 NCBI chr20:44,090,823...44,109,962
Ensembl chr20:44,090,914...44,133,095
JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:11054547), (PMID:15193426)
PMID:21873635
(MGI:1347751|PMID:10557334), (MGI:1926659|PMID:11054547), (MGI:2183617|PMID:12021263), (MGI:3529732|PMID:15710237)
RGD PMID:10557334 PMID:11054547 PMID:12021263 PMID:15193426 PMID:15710237 More... MGI:1347751 MGI:1926659 MGI:2183617 MGI:3529732, RGD:13792537 NCBI chr10:59,769,563...59,786,688
Ensembl chr10:59,769,571...59,787,011
JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IBA
(PMID:18544534)
PMID:21873635
RGD PMID:18544534 PMID:21873635 RGD:13792537 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741
JBrowse link
D-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO (PMID:21679769) RGD PMID:21679769 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741
JBrowse link
G Srr serine racemase involved_in ISO
IDA
(PMID:20106978) RGD PMID:20106978 PMID:20106978 RGD:8554326 NCBI chr10:59,769,563...59,786,688
Ensembl chr10:59,769,571...59,787,011
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    metabolic process 11458
      primary metabolic process 10260
        cellular amino acid metabolic process 273
          alpha-amino acid metabolic process 199
            D-amino acid metabolic process 3
              D-alanine metabolic process + 1
              D-amino acid biosynthetic process + 1
              D-amino acid catabolic process + 2
              D-arginine metabolic process 0
              D-cysteine metabolic process + 0
              D-glutamate metabolic process 0
              D-glutamine metabolic process 0
              D-leucine metabolic process + 0
              D-lysine metabolic process + 0
              D-ornithine metabolic process 0
              D-serine metabolic process + 2
              D-tyrosine metabolic process + 0
              D-valine metabolic process + 0
              octopine metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 18734
    metabolic process 11458
      cellular metabolic process 9697
        organic acid metabolic process 1010
          oxoacid metabolic process 982
            carboxylic acid metabolic process 967
              cellular amino acid metabolic process 273
                alpha-amino acid metabolic process 199
                  D-amino acid metabolic process 3
                    D-alanine metabolic process + 1
                    D-amino acid biosynthetic process + 1
                    D-amino acid catabolic process + 2
                    D-arginine metabolic process 0
                    D-cysteine metabolic process + 0
                    D-glutamate metabolic process 0
                    D-glutamine metabolic process 0
                    D-leucine metabolic process + 0
                    D-lysine metabolic process + 0
                    D-ornithine metabolic process 0
                    D-serine metabolic process + 2
                    D-tyrosine metabolic process + 0
                    D-valine metabolic process + 0
                    octopine metabolic process + 0
paths to the root