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ONTOLOGY REPORT - ANNOTATIONS


Term:urate metabolic process
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Accession:GO:0046415 term browser browse the term
Definition:The chemical reactions and pathways involving urate, the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals.
Synonyms:exact_synonym: urate metabolism


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urate metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027750.1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr17:43,477,600...43,504,604 JBrowse link
G AABR07044759.1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr20:19,636,159...19,637,958 JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 ISO (PMID:18834626), (PMID:19503597), (PMID:20053405) RGD PMID:18834626, PMID:19503597, PMID:20053405 NCBI chr 4:88,765,441...88,890,268
Ensembl chr 4:88,832,178...88,890,621
JBrowse link
G Carmil1 capping protein regulator and myosin 1 linker 1 ISO (PMID:19503597), (PMID:24318514) RGD PMID:19503597, PMID:24318514 NCBI chr17:43,050,282...43,339,403
Ensembl chr17:43,050,789...43,339,403
JBrowse link
G G6pc glucose-6-phosphatase, catalytic subunit ISO MGI:MGI:2387343 (MGI:MGI:80692|PMID:8640227) RGD PMID:8640227 MGI:MGI:80692 NCBI chr10:89,286,009...89,296,213
Ensembl chr10:89,285,855...89,296,213
JBrowse link
G Gckr glucokinase regulator ISO (PMID:19503597) RGD PMID:19503597 NCBI chr 6:26,355,296...26,385,761
Ensembl chr 6:26,355,296...26,385,761
JBrowse link
G Slc16a9 solute carrier family 16, member 9 ISO (PMID:19503597) RGD PMID:19503597 NCBI chr20:19,634,280...19,675,358 JBrowse link
G Slc17a1 solute carrier family 17 member 1 ISO (PMID:19503597) RGD PMID:19503597 NCBI chr17:43,473,048...43,504,645 JBrowse link
G Slc17a3 solute carrier family 17 member 3 ISO (PMID:18834626), (PMID:20053405), (PMID:20162743) RGD PMID:18834626, PMID:20053405, PMID:20162743 NCBI chr17:43,518,760...43,545,160
Ensembl chr17:43,518,655...43,543,185
JBrowse link
G Slc22a12 solute carrier family 22 member 12 ISO
IEA
(PMID:19503597)
GO_REF:0000107
RGD
Ensembl
PMID:19503597 GO_REF:0000107 NCBI chr 1:221,910,787...221,919,277
Ensembl chr 1:221,910,767...221,919,301
JBrowse link
G Slc2a9 solute carrier family 2 member 9 ISO (PMID:18834626), (PMID:19503597), (PMID:20053405) RGD PMID:18834626, PMID:19503597, PMID:20053405 NCBI chr14:77,067,537...77,192,702
Ensembl chr14:77,067,503...77,192,702
JBrowse link
urate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnp purine nucleoside phosphorylase ISO (PMID:16964310) RGD PMID:16964310 NCBI chr15:27,875,883...27,883,566
Ensembl chr15:27,875,911...27,883,350
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO (PMID:12847698) RGD PMID:12847698 NCBI chr  X:111,798,233...111,820,270
Ensembl chr  X:111,798,233...111,820,266
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO (MGI:MGI:3763852|PMID:17898038) RGD PMID:17898038 MGI:MGI:3763852 NCBI chr14:6,673,686...6,679,965
Ensembl chr14:6,673,686...6,679,901
JBrowse link
urate catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umod uromodulin ISO
IEA
(MGI:MGI:6094531|PMID:29145399)
GO_REF:0000107
RGD
Ensembl
PMID:29145399 GO_REF:0000107, MGI:MGI:6094531 NCBI chr 1:189,186,027...189,199,939
Ensembl chr 1:189,186,026...189,199,376
JBrowse link
G Uox urate oxidase IEA
IDA
GO_REF:0000041
PMID:1520291
UniProt PMID:1520291 GO_REF:0000041, RGD:12859077 NCBI chr 2:252,452,282...252,488,497
Ensembl chr 2:252,452,269...252,488,396
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr12:9,446,808...9,456,777
Ensembl chr12:9,446,940...9,455,673
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      cellular metabolic process 11065
        organic acid metabolic process 1090
          urate metabolic process 17
            urate biosynthetic process 3
            urate catabolic process 3
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      nitrogen compound metabolic process 10342
        cellular nitrogen compound metabolic process 6683
          purine-containing compound metabolic process 479
            urate metabolic process 17
              urate biosynthetic process 3
              urate catabolic process 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.