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ONTOLOGY REPORT - ANNOTATIONS


Term:carboxylic acid catabolic process
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Accession:GO:0046395 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups.
Synonyms:exact_synonym: carboxylic acid breakdown;   carboxylic acid catabolism;   carboxylic acid degradation


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carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON1 paraoxonase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:74,943,646...74,974,720
Ensembl chr 9:74,926,048...74,974,724
JBrowse link
G PON3 paraoxonase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:74,983,040...75,017,947
Ensembl chr 9:74,991,277...75,017,942
JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,585...53,794,706
JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHYH phytanoyl-CoA 2-hydroxylase ISO RGD PMID:10588950 RGD:727286 NCBI chr10:48,404,298...48,423,978
Ensembl chr10:48,404,293...48,423,978
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:108,958,812...108,986,373
Ensembl chr14:108,959,134...108,986,726
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:130,485,305...130,617,534
Ensembl chr 4:130,483,878...130,617,531
JBrowse link
G DDAH2 dimethylarginine dimethylaminohydrolase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:23,838,993...23,842,514
Ensembl chr 7:23,838,993...23,842,516
JBrowse link
G FAH fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1929783|PMID:11209059) Ensembl
MGI
PMID:11209059 GO_REF:0000107 MGI:1929783 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,983...49,105,598
JBrowse link
G NOS1 nitric oxide synthase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:35,112,898...35,299,297
Ensembl chr14:35,113,184...35,295,972
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,944...44,327,111
JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,156...6,228,938
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:133,808,193...133,830,517 JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,038...32,028,986
JBrowse link
G ARG2 arginase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,987...91,385,911
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:133,808,193...133,830,517 JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
PMID:12753071
GO_Central
MGI
Ensembl
PMID:12753071 PMID:21873635 GO_REF:0000107 RGD:1299508 NCBI chr 2:9,328,260...9,353,384
Ensembl chr 2:9,328,269...9,353,340
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,390,493...76,417,301
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chr 7:97,360,583...97,381,885
Ensembl chr 7:97,357,952...97,381,841
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) MGI PMID:14755340 MGI:3027291 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,300...48,925,976
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) RGD
MGI
PMID:11733007 PMID:14755340 MGI:3027291 RGD:1582175 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,681...54,143,602
JBrowse link
G BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 6:49,381,995...49,398,745 JBrowse link
G BCKDHB branched chain keto acid dehydrogenase E1 subunit beta involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:85,755,819...86,017,661
Ensembl chr 1:85,715,203...86,017,600
JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,352...17,402,204
JBrowse link
G ECHDC2 enoyl-CoA hydratase domain containing 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:159,326,146...159,347,178
Ensembl chr 6:159,326,150...159,349,471
JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr18:44,985,410...45,102,171
Ensembl chr18:44,985,425...45,208,347
JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000043 NCBI chr15:94,795,744...94,941,362
Ensembl chr15:94,785,453...94,941,381
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chr 1:130,896,488...130,910,582
Ensembl chr 1:130,893,983...130,940,350
JBrowse link
G SLC25A44 solute carrier family 25 member 44 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:93,837,004...93,857,154
Ensembl chr 4:93,810,504...93,857,158
JBrowse link
G TMEM91 transmembrane protein 91 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 6:49,366,073...49,372,419 JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:3968063 PMID:21873635 RGD:2317678 NCBI chr14:40,642,810...40,656,922
Ensembl chr14:40,624,213...40,659,928
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT19 nudix hydrolase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,574,064...42,583,473
Ensembl chr 6:42,574,071...42,583,934
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
cellular amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOSF1 enolase superfamily member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:105,613,211...105,642,533
Ensembl chr 6:105,613,273...105,645,113
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,401...54,946,202
JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,929,215...41,950,633
JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,390,493...76,417,301
JBrowse link
D-gluconate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDNK IDNK gluconokinase involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr10:31,329,716...31,341,025
Ensembl chr10:31,329,714...31,340,875
JBrowse link
G PGD phosphogluconate dehydrogenase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:70,675,751...70,692,697
Ensembl chr 6:70,675,815...70,692,679
JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(MGI:3588122|PMID:15769935) UniProt
MGI
Ensembl
PMID:15769935 GO_REF:0000024 GO_REF:0000107 MGI:3588122 NCBI chr 6:165,811,245...165,825,168
Ensembl chr 6:165,811,246...165,824,896
JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,929,215...41,950,633
JBrowse link
dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT8 acyl-CoA thioesterase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,039,627...48,054,335
Ensembl chr17:48,039,628...48,054,335
JBrowse link
G LOC100158115 acyl-coenzyme A thioesterase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:96,941,065...96,945,834
Ensembl chr 7:96,868,157...96,949,358
JBrowse link
G LOC110255331 acyl-coenzyme A thioesterase 1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:96,868,109...96,873,604
Ensembl chr 7:96,868,157...96,949,358
JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HACL1 2-hydroxyacyl-CoA lyase 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:2,786,007...2,840,882
Ensembl chr13:2,766,361...2,840,902
JBrowse link
G HAO1 hydroxyacid oxidase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:16,746,153...16,802,460
Ensembl chr17:16,744,440...16,802,442
JBrowse link
G ILVBL ilvB acetolactate synthase like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:62,435,368...62,447,030
Ensembl chr 2:62,435,155...62,451,700
JBrowse link
G PEX13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2670243|PMID:12897163) Ensembl
MGI
PMID:12897163 GO_REF:0000107 MGI:2670243 NCBI chr 3:80,757,470...80,791,107
Ensembl chr 3:80,753,908...80,791,056
JBrowse link
G PHYH phytanoyl-CoA 2-hydroxylase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1097297|PMID:9326939), (MGI:3052413|PMID:12915479)
GO_Central
MGI
RGD
PMID:9326939 PMID:10588950 PMID:12915479 PMID:21873635 MGI:1097297 MGI:3052413 RGD:727286 NCBI chr10:48,404,298...48,423,978
Ensembl chr10:48,404,293...48,423,978
JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:121,530,449...121,578,994
Ensembl chr 1:121,526,295...121,579,121
JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,235...124,503,195
JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:71,123,187...71,180,758
Ensembl chr 5:71,122,320...71,180,723
JBrowse link
G ABCD3 ATP binding cassette subfamily D member 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:122,847,925...122,929,454
Ensembl chr 4:122,837,525...122,953,257
JBrowse link
G ABCD4 ATP binding cassette subfamily D member 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:97,568,193...97,585,693
Ensembl chr 7:97,567,712...97,585,679
JBrowse link
G ACAA1 acetyl-CoA acyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:22,964,844...23,020,138
Ensembl chr13:22,964,875...23,020,143
JBrowse link
G ACAA2 acetyl-CoA acyltransferase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:11879205 PMID:21873635 RGD:2317624 NCBI chr 1:99,284,467...99,310,759
Ensembl chr 1:99,280,800...99,332,381
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,380...137,595,108
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO RGD PMID:8034667 RGD:631729 NCBI chr12:52,573,521...52,581,755
Ensembl chr12:52,576,401...52,581,755
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
G ACAT2 acetyl-CoA acetyltransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:7,600,616...7,612,861
Ensembl chr 1:7,598,735...7,612,811
JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in IEA
ISO
InterPro
RGD
PMID:1400324 PMID:8654595 GO_REF:0000002 RGD:2299949 RGD:2299971 NCBI chr13:40,220,952...40,255,967
Ensembl chr13:40,223,008...40,255,967
JBrowse link
G ACOX3 acyl-CoA oxidase 3, pristanoyl involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:2,716,913...2,756,221
Ensembl chr 8:2,716,914...2,775,333
JBrowse link
G ACOXL acyl-CoA oxidase like involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:45,202,875...45,563,062
Ensembl chr 3:45,203,781...45,563,297
JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(MGI:2387247|PMID:12151381) UniProt
MGI
Ensembl
PMID:12151381 GO_REF:0000024 GO_REF:0000107 MGI:2387247 NCBI chr13:124,633,906...124,646,237
Ensembl chr13:124,633,684...124,646,648
JBrowse link
G AUH AU RNA binding methylglutaconyl-CoA hydratase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:2,398,456...2,546,329
Ensembl chr14:2,398,462...2,546,320
JBrowse link
G BDH2 3-hydroxybutyrate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:117,969,913...117,995,219
Ensembl chr 8:117,969,998...117,995,215
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A involved_in IEA
ISO
UniProt
RGD
PMID:31901136 PMID:31953200 GO_REF:0000041 RGD:25823178 RGD:25823179 NCBI chr 2:4,250,642...4,293,914
Ensembl chr 2:4,233,099...4,293,984
JBrowse link
G CPT1B carnitine palmitoyltransferase 1B involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:155,552...163,536
Ensembl chr 5:151,906...163,546
JBrowse link
G CPT1C carnitine palmitoyltransferase 1C involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:54,732,701...54,747,706
Ensembl chr 6:54,731,557...54,749,249
JBrowse link
G CPT2 carnitine palmitoyltransferase 2 involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
Ensembl
RGD
PMID:10380116 PMID:10796071 PMID:21873635 GO_REF:0000107 RGD:21410186 RGD:2326088 NCBI chr 6:159,038,129...159,061,327
Ensembl chr 6:159,036,821...159,061,327
JBrowse link
G CROT carnitine O-octanoyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:93,263,606...93,308,150
Ensembl chr 9:93,258,619...93,308,151
JBrowse link
G DECR1 2,4-dienoyl-CoA reductase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:46,731,359...46,767,427
Ensembl chr 4:46,730,461...46,767,427
JBrowse link
G E4F1 E4F transcription factor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:39,757,679...39,773,024
Ensembl chr 3:39,757,290...39,772,208
JBrowse link
G ECHDC1 ethylmalonyl-CoA decarboxylase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:35,852,939...35,909,314
Ensembl chr 1:35,852,934...35,909,956
JBrowse link
G ECHDC2 enoyl-CoA hydratase domain containing 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:159,326,146...159,347,178
Ensembl chr 6:159,326,150...159,349,471
JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12379132 PMID:21873635 RGD:2317616 NCBI chr14:141,340,320...141,348,870
Ensembl chr14:141,335,990...141,349,030
JBrowse link
G ECI1 enoyl-CoA delta isomerase 1 involved_in
acts_upstream_of_or_within
ISO PMID:11781327
(MGI:2180251|PMID:11916962)
UniProt
MGI
PMID:11781327 PMID:11916962 MGI:2180251 RGD:2306199 NCBI chr 3:39,750,742...39,758,516 JBrowse link
G ECI2 enoyl-CoA delta isomerase 2 ISO RGD PMID:11781327 RGD:2306199 NCBI chr 7:2,426,126...2,446,172
Ensembl chr 7:2,421,054...2,446,276
JBrowse link
G EHHADH enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:3711634|PMID:17442273)
GO_Central
MGI
UniProt
PMID:17442273 PMID:21873635 GO_REF:0000041 MGI:3711634 NCBI chr13:123,104,085...123,162,119
Ensembl chr13:123,102,666...123,176,137
JBrowse link
G HADH hydroxyacyl-CoA dehydrogenase involved_in IEA
ISO
IDA
(PMID:2817332) UniProt
RGD
PMID:2817332 PMID:17491019 GO_REF:0000041 RGD:2302227 NCBI chr 8:113,952,561...114,005,510
Ensembl chr 8:113,950,033...114,005,512
JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:2135592|PMID:11390422)
(PMID:21873635)
UniProt
MGI
RGD
GO_Central
PMID:1730633 PMID:11390422 PMID:21873635 GO_REF:0000041 MGI:2135592 RGD:1600572 NCBI chr 3:112,753,343...112,797,627
Ensembl chr 3:112,752,865...112,797,735
JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:1730633 PMID:21873635 RGD:1600572 NCBI chr 3:112,712,894...112,753,121
Ensembl chr 3:112,704,023...112,753,086
JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,218,540...46,220,942
Ensembl chr  X:46,218,545...46,220,944
JBrowse link
G HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3711634|PMID:17442273) UniProt
MGI
PMID:17442273 GO_REF:0000041 MGI:3711634 NCBI chr 2:123,313,445...123,401,386
Ensembl chr 2:123,313,448...123,402,731
JBrowse link
G LEP leptin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5444071|PMID:22958918) Ensembl
MGI
PMID:22958918 GO_REF:0000107 MGI:5444071 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,447
JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:59,252,330...59,270,117
Ensembl chr 4:59,252,337...59,270,117
JBrowse link
G PEX5 peroxisomal biogenesis factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3711634|PMID:17442273)
(MGI:1096198|PMID:9288097)
Ensembl
MGI
PMID:9288097 PMID:17442273 GO_REF:0000107 MGI:1096198 MGI:3711634 NCBI chr 5:63,542,422...63,562,762
Ensembl chr 5:63,542,431...63,562,849
JBrowse link
G PEX7 peroxisomal biogenesis factor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3052413|PMID:12915479) Ensembl
MGI
PMID:12915479 GO_REF:0000107 MGI:3052413 NCBI chr 1:27,257,872...27,346,529
Ensembl chr 1:27,257,008...27,346,515
JBrowse link
G PPARD peroxisome proliferator activated receptor delta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14676330) Ensembl
UniProt
PMID:14676330 GO_REF:0000107 NCBI chr 7:31,222,533...31,295,221
Ensembl chr 7:31,222,589...31,295,212
JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:39,739,058...39,749,600
Ensembl chr 3:39,739,308...39,758,376
JBrowse link
G SCP2 sterol carrier protein 2 involved_in ISO PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr 6:159,191,045...159,314,985 JBrowse link
G SESN2 sestrin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5444071|PMID:22958918) Ensembl
MGI
PMID:22958918 GO_REF:0000107 MGI:5444071 NCBI chr 6:85,321,982...85,348,044
Ensembl chr 6:85,324,228...85,348,044
JBrowse link
G SLC25A17 solute carrier family 25 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:7,622,638...7,669,980
Ensembl chr 5:7,622,645...7,741,541
JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:121,530,449...121,578,994
Ensembl chr 1:121,526,295...121,579,121
JBrowse link
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAD11 acyl-CoA dehydrogenase family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,733,508...73,831,496
Ensembl chr13:73,730,171...73,831,701
JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:3968063 PMID:21873635 RGD:2317678 NCBI chr15:112,935,631...112,969,381
Ensembl chr15:112,933,498...112,969,578
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA
ISO
Ensembl
RGD
PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,380...137,595,108
JBrowse link
G ACADS acyl-CoA dehydrogenase short chain involved_in IEA
ISO
Ensembl
RGD
PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr14:40,642,810...40,656,922
Ensembl chr14:40,624,213...40,659,928
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,573,521...52,581,755
Ensembl chr12:52,576,401...52,581,755
JBrowse link
G ETFA electron transfer flavoprotein subunit alpha involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:56,450,508...56,540,275
Ensembl chr 7:56,440,620...56,540,253
JBrowse link
G ETFB electron transfer flavoprotein subunit beta involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:58,501,892...58,517,580
Ensembl chr 6:58,501,808...58,517,580
JBrowse link
G ETFDH electron transfer flavoprotein dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:47,608,499...47,655,889
Ensembl chr 8:47,608,689...47,657,436
JBrowse link
G GCDH glutaryl-CoA dehydrogenase involved_in IBA
IEA
ISS
(PMID:21873635) GO_Central
Ensembl
UniProt
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:66,131,154...66,138,963
Ensembl chr 2:66,130,625...66,138,868
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:3597357) BHF-UCL PMID:3597357 NCBI chr 1:130,896,488...130,910,582
Ensembl chr 1:130,893,983...130,940,350
JBrowse link
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX1 acyl-CoA oxidase 1 involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
InterPro
RGD
PMID:1400324 PMID:21873635 GO_REF:0000002 RGD:2299949 NCBI chr12:5,450,913...5,479,550
Ensembl chr12:5,428,360...5,479,544
JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:40,220,952...40,255,967
Ensembl chr13:40,223,008...40,255,967
JBrowse link
G ACOX3 acyl-CoA oxidase 3, pristanoyl involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
InterPro
RGD
PMID:1400324 PMID:8026493 PMID:8654595 PMID:21873635 GO_REF:0000002 RGD:2299949 RGD:2299969 RGD:2299971 NCBI chr 8:2,716,913...2,756,221
Ensembl chr 8:2,716,914...2,775,333
JBrowse link
G ACOXL acyl-CoA oxidase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:45,202,875...45,563,062
Ensembl chr 3:45,203,781...45,563,297
JBrowse link
G CRAT carnitine O-acetyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:269,387,430...269,401,334
Ensembl chr 1:269,386,650...269,401,331
JBrowse link
fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADL acyl-CoA dehydrogenase long chain acts_upstream_of_or_within ISO (MGI:5660099|PMID:21151927) MGI PMID:21151927 MGI:5660099 NCBI chr15:112,935,631...112,969,381
Ensembl chr15:112,933,498...112,969,578
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain acts_upstream_of_or_within ISO (MGI:5660099|PMID:21151927) MGI PMID:21151927 MGI:5660099 NCBI chr12:52,573,521...52,581,755
Ensembl chr12:52,576,401...52,581,755
JBrowse link
G ACOT7 acyl-CoA thioesterase 7 acts_upstream_of_or_within ISO (MGI:2158988|PMID:11834298) MGI PMID:11834298 MGI:2158988 NCBI chr 6:67,152,428...67,254,097
Ensembl chr 6:67,152,428...67,254,103
JBrowse link
G ACOT8 acyl-CoA thioesterase 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:48,039,627...48,054,335
Ensembl chr17:48,039,628...48,054,335
JBrowse link
G ACOX1 acyl-CoA oxidase 1 involved_in ISO (PMID:32169171) UniProt PMID:32169171 NCBI chr12:5,450,913...5,479,550
Ensembl chr12:5,428,360...5,479,544
JBrowse link
G DECR2 2,4-dienoyl-CoA reductase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:41,291,038...41,304,044
Ensembl chr 3:41,295,648...41,304,058
JBrowse link
G ECI2 enoyl-CoA delta isomerase 2 involved_in ISO (PMID:10419495) UniProt PMID:10419495 NCBI chr 7:2,426,126...2,446,172
Ensembl chr 7:2,421,054...2,446,276
JBrowse link
G FAAH fatty acid amide hydrolase involved_in ISS
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:12734197 PMID:21873635 GO_REF:0000024 RGD:1625736 NCBI chr 6:165,060,279...165,079,340
Ensembl chr 6:165,060,287...165,079,769
JBrowse link
G LEP leptin ISO RGD PMID:12058043 RGD:625499 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,447
JBrowse link
G LOC102164418 vitamin D3 hydroxylase-associated protein-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:165,035,596...165,054,160 JBrowse link
G LPIN1 lipin 1 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 3:124,940,557...125,074,137
Ensembl chr 3:124,940,548...125,074,123
JBrowse link
G LPIN2 lipin 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:103,625,725...103,728,151
Ensembl chr 6:103,578,549...103,728,151
JBrowse link
G LPIN3 lipin 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:43,993,710...44,006,188
Ensembl chr17:43,989,333...44,006,262
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102167410 5-formyltetrahydrofolate cyclo-ligase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chr 7:48,717,518...48,873,492 JBrowse link
G PM20D2 peptidase M20 domain containing 2 NOT|involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:57,188,019...57,219,243
Ensembl chr 1:57,188,535...57,219,233
JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase involved_in IMP
IBA
(PMID:11561735)
(PMID:21873635)
UniProt
GO_Central
PMID:11561735 PMID:21873635 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,965...34,015,469
JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2151301|PMID:11544478), (MGI:3050939|PMID:15262267) UniProt
MGI
PMID:11544478 PMID:15262267 GO_REF:0000041 MGI:2151301 MGI:3050939 NCBI chr 7:19,351,485...19,375,515
Ensembl chr 7:19,351,361...19,379,100
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875), (PMID:6121377) BHF-UCL PMID:6121377 PMID:11032875 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,550
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000107 MGI:53641 RGD:13504861 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000107 MGI:53641 RGD:13504861 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
MGI
PMID:4193185 GO_REF:0000107 MGI:53641 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
MGI
PMID:4193185 GO_REF:0000107 MGI:53641 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADHFE1 alcohol dehydrogenase iron containing 1 involved_in ISO (PMID:16435184) UniProt PMID:16435184 NCBI chr 4:68,251,970...68,285,436 JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD2 glutamate decarboxylase 2 ISO RGD PMID:8999827 RGD:1625237 NCBI chr10:49,316,682...49,391,013
Ensembl chr10:49,313,641...49,390,926
JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3623875|PMID:16641247)
GO_Central
MGI
PMID:16641247 PMID:21873635 MGI:3623875 NCBI chr15:95,513,414...95,606,029
Ensembl chr15:95,513,380...95,598,311
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chr 8:55,652,194...55,701,077
Ensembl chr 8:55,652,201...55,701,077
JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr13:31,995,600...32,002,514
Ensembl chr13:31,995,595...32,002,470
JBrowse link
G GLDC glycine decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:215,608,854...215,715,062
Ensembl chr 1:215,608,849...215,715,061
JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:31,995,600...32,002,514
Ensembl chr13:31,995,595...32,002,470
JBrowse link
G GCSH glycine cleavage system protein H involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:6402507 PMID:21873635 RGD:1598699 NCBI chr 6:7,171,186...7,184,732
Ensembl chr 6:7,171,192...7,184,729
JBrowse link
G GLDC glycine decarboxylase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:6778858 PMID:21873635 RGD:1642728 NCBI chr 1:215,608,854...215,715,062
Ensembl chr 1:215,608,849...215,715,061
JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAO1 hydroxyacid oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:16,746,153...16,802,460
Ensembl chr17:16,744,440...16,802,442
JBrowse link
glyoxylate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736
JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr16:20,576,661...20,617,008
Ensembl chr16:20,576,660...20,617,017
JBrowse link
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:108,958,812...108,986,373
Ensembl chr14:108,959,134...108,986,726
JBrowse link
histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:87,551,887...87,569,271
Ensembl chr 5:87,553,022...87,569,305
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IC (PMID:2572277) BHF-UCL PMID:2572277
G HAL histidine ammonia-lyase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:52899|PMID:8486363)
GO_Central
MGI
PMID:8486363 PMID:21873635 MGI:52899 NCBI chr 5:87,522,483...87,547,489
Ensembl chr 5:87,522,522...87,547,491
JBrowse link
G HDC histidine decarboxylase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2138019|PMID:11478947)
GO_Central
MGI
PMID:11478947 PMID:21873635 MGI:2138019 NCBI chr 1:121,505,677...121,525,416
Ensembl chr 1:121,505,742...121,525,255
JBrowse link
G UROC1 urocanate hydratase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:53,592,763...53,634,214
Ensembl chr 7:53,590,776...53,637,714
JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:87,551,887...87,569,271
Ensembl chr 5:87,553,022...87,569,305
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:87,522,483...87,547,489
Ensembl chr 5:87,522,522...87,547,491
JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:53,592,763...53,634,214
Ensembl chr 7:53,590,776...53,637,714
JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:87,551,887...87,569,271
Ensembl chr 5:87,553,022...87,569,305
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:87,522,483...87,547,489
Ensembl chr 5:87,522,522...87,547,491
JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:53,592,763...53,634,214
Ensembl chr 7:53,590,776...53,637,714
JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLMH bleomycin hydrolase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:46,342,502...46,393,642
Ensembl chr12:46,342,501...46,393,484
JBrowse link
G CBS cystathionine beta-synthase involved_in ISO (PMID:18776696), (PMID:24416422) BHF-UCL PMID:18776696 PMID:24416422 NCBI chr13:206,205,942...206,231,363 JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,224...74,270,802
JBrowse link
homogentisate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,983...49,105,598
JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADSB acyl-CoA dehydrogenase short/branched chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:132,563,002...132,607,574
Ensembl chr14:132,563,309...132,626,841
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3770498|PMID:17767905) Ensembl
MGI
RGD
PMID:11733007 PMID:17767905 GO_REF:0000107 MGI:3770498 RGD:1582175 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,681...54,143,602
JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,352...17,402,204
JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,218,540...46,220,942
Ensembl chr  X:46,218,545...46,220,944
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736
JBrowse link
G GPT glutamic--pyruvic transaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:297,747...302,498
Ensembl chr 4:297,748...320,056
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr16:20,576,661...20,617,008
Ensembl chr16:20,576,660...20,617,017
JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736
JBrowse link
G CBS cystathionine beta-synthase involved_in ISO (PMID:15520012) UniProt PMID:15520012 NCBI chr13:206,205,942...206,231,363 JBrowse link
G CDO1 cysteine dioxygenase type 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:16611641 PMID:21873635 RGD:2301357 NCBI chr 2:119,927,768...119,940,690
Ensembl chr 2:119,892,691...119,940,665
JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 5:18,379,340...18,410,446
Ensembl chr 5:18,379,340...18,410,212
JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 5:18,379,340...18,410,446
Ensembl chr 5:18,379,340...18,410,212
JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYAT3 kynurenine aminotransferase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:127,451,475...127,507,766
Ensembl chr 4:127,451,516...127,507,760
JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000041 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,665...8,982,945
JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (MGI:1350812|PMID:10567240) MGI PMID:10567240 MGI:1350812 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,816...25,039,196
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515508 peroxisomal sarcosine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,306,327...45,319,938
Ensembl chr12:45,257,188...45,322,767
JBrowse link
G LOC110255229 peroxisomal sarcosine oxidase involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr12:45,256,806...45,270,755
Ensembl chr12:45,257,188...45,322,767
JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr18:24,938,366...25,039,197
Ensembl chr18:24,974,816...25,039,196
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:98,091,161...98,111,267
Ensembl chr 7:98,091,123...98,111,572
JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,983...49,105,598
JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr 7:100,392,217...100,404,025
Ensembl chr 7:100,392,271...100,408,423
JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr13:139,660,315...139,710,402
Ensembl chr13:139,660,343...139,710,405
JBrowse link
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:30,845,608...30,857,658
Ensembl chr14:30,845,613...30,857,667
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,401...54,946,202
JBrowse link
G PAH phenylalanine hydroxylase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:81,385,401...81,460,569
Ensembl chr 5:81,236,096...81,463,452
JBrowse link
G QDPR quinoid dihydropteridine reductase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:4155291 PMID:21873635 RGD:5128604 NCBI chr 8:12,529,500...12,549,471
Ensembl chr 8:12,335,252...12,549,603
JBrowse link
G TAT tyrosine aminotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,587...14,583,177
JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in ISO (PMID:18776696) UniProt PMID:18776696 NCBI chr13:206,205,942...206,231,363 JBrowse link
G SDS serine dehydratase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:38,503,922...38,513,908
Ensembl chr14:38,503,930...38,513,880
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,414,446...60,435,450
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,321
JBrowse link
L-threonine catabolic process to glycine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TDH L-threonine 3-dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:14,577,009...14,597,695 JBrowse link
lactate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHD lactate dehydrogenase D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:12,548,098...12,552,237
Ensembl chr 6:12,548,131...12,555,648
JBrowse link
leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,352...17,402,204
JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:81,611,516...81,630,454
Ensembl chr 6:81,611,422...81,630,530
JBrowse link
G HMGCLL1 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:25,596,721...25,784,238
Ensembl chr 7:25,596,593...25,794,944
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:130,916,956...130,930,172
Ensembl chr 1:130,893,983...130,940,350
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:130,896,488...130,910,582
Ensembl chr 1:130,893,983...130,940,350
JBrowse link
G MCCC2 methylcrotonyl-CoA carboxylase subunit 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:47,917,308...47,996,540
Ensembl chr16:47,917,291...47,996,540
JBrowse link
leukotriene B4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP4F52 cytochrome P450 family 4 subfamily F member 52 involved_in ISO (PMID:10492403), (PMID:8026587), (PMID:9799565) UniProt PMID:8026587 PMID:9799565 PMID:10492403 NCBI chr 2:61,745,069...61,759,971 JBrowse link
G LOC110259329 docosahexaenoic acid omega-hydroxylase CYP4F3-like involved_in ISO (PMID:11461919) UniProt PMID:11461919 NCBI chr 2:61,863,378...61,884,717
Ensembl chr 2:61,864,575...61,984,903
JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,235...124,503,195
JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:3968063 PMID:21873635 RGD:2317678 NCBI chr15:112,935,631...112,969,381
Ensembl chr15:112,933,498...112,969,578
JBrowse link
G ADTRP androgen dependent TFPI regulating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:8,242,770...8,313,684
Ensembl chr 7:8,243,368...8,314,339
JBrowse link
G AIG1 androgen induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:21,913,237...22,165,078
Ensembl chr 1:21,913,239...22,165,083
JBrowse link
G GLYATL2 glycine-N-acyltransferase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:12,280,093...12,337,509
Ensembl chr 2:12,279,731...12,337,494
JBrowse link
G LIPE lipase E, hormone sensitive type acts_upstream_of_or_within ISO (MGI:3654969|PMID:16804080) MGI PMID:16804080 MGI:3654969 NCBI chr 6:49,543,671...49,560,126
Ensembl chr 6:49,540,907...49,560,126
JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSF3 acyl-CoA synthetase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:663,201...708,800
Ensembl chr 6:663,109...712,015
JBrowse link
medium-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD1 abhydrolase domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:111,996,138...112,002,127
Ensembl chr 3:111,996,138...112,002,133
JBrowse link
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:54,655,694...54,776,140
Ensembl chr 7:54,655,726...54,837,484
JBrowse link
G ABHD3 abhydrolase domain containing 3, phospholipase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:106,851,625...106,917,720
Ensembl chr 6:106,851,626...106,917,935
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in ISO
IEA
RGD
Ensembl
PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,380...137,595,108
JBrowse link
G GLYATL2 glycine-N-acyltransferase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:12,280,093...12,337,509
Ensembl chr 2:12,279,731...12,337,494
JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAT1A methionine adenosyltransferase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:82,109,405...82,126,487
Ensembl chr14:82,109,404...82,127,049
JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:39,523,076...39,532,590 JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:143,604,362...143,616,037
Ensembl chr 2:143,604,362...143,615,991
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:35,192,509...35,219,527
Ensembl chr 8:35,134,652...35,219,476
JBrowse link
G RENBP renin binding protein involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:124,662,957...124,670,522
Ensembl chr  X:124,657,675...124,672,235
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:64,336,354...64,445,669
Ensembl chr 9:64,336,499...64,445,663
JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACB acetyl-CoA carboxylase beta involved_in ISO (MGI:3530688|PMID:15677334), (MGI:3629477|PMID:12920182) UniProt PMID:12920182 PMID:15677334 MGI:3530688 MGI:3629477 NCBI chr14:41,621,574...41,739,916 JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735
G CNR1 cannabinoid receptor 1 ISO RGD PMID:19724020 RGD:2314644 NCBI chr 1:56,466,022...56,493,275
Ensembl chr 1:56,466,027...56,492,602
JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:11485163 RGD:2316274 NCBI chr15:24,895,575...24,900,710
Ensembl chr15:24,896,450...24,906,372
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5474727|PMID:23209793) Ensembl
ARUK-UCL
PMID:23209793 GO_REF:0000107 MGI:5474727 NCBI chr 6:95,738,961...95,753,245
Ensembl chr 6:95,738,973...95,814,953
JBrowse link
G PINK1 PTEN induced kinase 1 ISO RGD PMID:25421206 RGD:11560775 NCBI chr 6:78,863,195...78,884,663
Ensembl chr 6:78,863,190...78,884,644
JBrowse link
G PLIN5 perilipin 5 involved_in ISO (MGI:5559662|PMID:22675471), (MGI:5559666|PMID:21885430)
(MGI:5440401|PMID:22532565)
UniProt PMID:21885430 PMID:22532565 PMID:22675471 MGI:5440401 MGI:5559662 MGI:5559666 NCBI chr 2:74,304,613...74,314,314
Ensembl chr 2:74,300,619...74,315,125
JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETFBKMT electron transfer flavoprotein subunit beta lysine methyltransferase involved_in ISO (PMID:25416781)
(MGI:5700285|PMID:25023281)
UniProt PMID:25023281 PMID:25416781 MGI:5700285 NCBI chr 5:42,568,131...42,575,983 JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTC ornithine transcarbamylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,837
JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAA1 acetyl-CoA acyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:22,964,844...23,020,138
Ensembl chr13:22,964,875...23,020,143
JBrowse link
G PON3 paraoxonase 3 ISO RGD PMID:12946270 RGD:1303961 NCBI chr 9:74,983,040...75,017,947
Ensembl chr 9:74,991,277...75,017,942
JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,235...124,503,195
JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:71,123,187...71,180,758
Ensembl chr 5:71,122,320...71,180,723
JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chr14:122,777,135...122,828,054
Ensembl chr14:122,777,130...122,828,051
JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,555,785...48,620,472
Ensembl chr 6:48,555,789...48,587,919
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO RGD PMID:19302064 RGD:2311346 NCBI chr 2:4,250,642...4,293,914
Ensembl chr 2:4,233,099...4,293,984
JBrowse link
G FABP1 fatty acid binding protein 1 ISO peroxisomal RGD PMID:16262600 RGD:1626442 NCBI chr 3:57,850,511...57,854,966
Ensembl chr 3:57,850,499...57,854,964
JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:128,245,846...128,307,321
Ensembl chr15:128,245,846...128,308,335
JBrowse link
G IRS2 insulin receptor substrate 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,626,158...76,654,639
Ensembl chr11:76,626,179...76,653,881
JBrowse link
G PLIN5 perilipin 5 involved_in ISO PMID:22127648
(MGI:3709110|PMID:17130488)
UniProt PMID:17130488 PMID:22127648 MGI:3709110 RGD:8553692 NCBI chr 2:74,304,613...74,314,314
Ensembl chr 2:74,300,619...74,315,125
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20007935) BHF-UCL PMID:20007935 NCBI chr 9:88,286,911...88,290,131 JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,929,215...41,950,633
JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:45,213,712...45,240,437 JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:77,373,999...77,404,015
Ensembl chr 6:77,373,999...77,393,651
JBrowse link
G LOC110256626 proline dehydrogenase 1, mitochondrial involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:51,624,919...51,644,467 JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:45,213,712...45,240,437 JBrowse link
propionate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:75,187,195...75,197,613
Ensembl chr 7:75,187,194...75,197,733
JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G QPRT quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:9473669)
GO_Central
MGI
PMID:9473669 PMID:21873635 NCBI chr 3:17,987,223...18,001,712
Ensembl chr 3:17,987,242...18,001,713
JBrowse link
regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB11 ATP binding cassette subfamily B member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:75,402,296...75,487,092
Ensembl chr15:75,400,766...75,486,403
JBrowse link
G ABCD1 ATP binding cassette subfamily D member 1 involved_in ISO (MGI:1095802|PMID:9256488), (MGI:1101351|PMID:9418970), (MGI:5635749|PMID:25255441), (MGI:87573|PMID:9126326) UniProt PMID:9126326 PMID:9256488 PMID:9418970 PMID:25255441 MGI:1095802 MGI:1101351 MGI:5635749 MGI:87573 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,235...124,503,195
JBrowse link
G LONP2 lon peptidase 2, peroxisomal involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,372,596...36,466,185
Ensembl chr 6:36,372,598...36,466,190
JBrowse link
G MLYCD malonyl-CoA decarboxylase ISO RGD PMID:10516138 RGD:1600797 NCBI chr 6:4,683,386...4,698,698
Ensembl chr 6:4,681,664...4,698,661
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G TYSND1 trypsin like peroxisomal matrix peptidase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:73,079,557...73,089,618
Ensembl chr14:73,077,172...73,088,800
JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRABP1 cellular retinoic acid binding protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:47,602,316...47,608,865
Ensembl chr 7:47,602,192...47,608,970
JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:104,561,394...104,567,099
Ensembl chr14:104,563,195...104,567,097
JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in IEA
ISO
Ensembl
RGD
PMID:21138835 GO_REF:0000107 RGD:6771354 NCBI chr 3:70,573,551...70,593,416
Ensembl chr 3:70,572,197...70,593,408
JBrowse link
G CYP26C1 cytochrome P450 family 26 subfamily C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:104,550,901...104,558,977
Ensembl chr14:104,551,333...104,558,977
JBrowse link
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:641,997...649,313
Ensembl chr 3:642,494...648,909
JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase acts_upstream_of_or_within ISO (MGI:2183618|PMID:12023972) RGD
MGI
PMID:11741948 PMID:12023972 MGI:2183618 RGD:730275 NCBI chr17:37,726,084...37,744,378
Ensembl chr17:37,726,077...37,744,461
JBrowse link
short-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CES1 carboxylesterase 1 acts_upstream_of_or_within ISO (MGI:3654969|PMID:16804080) MGI PMID:16804080 MGI:3654969 NCBI chr 6:29,884,249...29,913,330 JBrowse link
G PCCA propionyl-CoA carboxylase subunit alpha involved_in IC (PMID:13752080) UniProt PMID:13752080 NCBI chr11:68,920,923...69,286,431
Ensembl chr11:68,920,929...69,301,533
JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCAT glycine C-acetyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:10,027,133...10,038,494
Ensembl chr 5:10,011,009...10,038,433
JBrowse link
G LOC110255953 probable low-specificity L-threonine aldolase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:3,728,742...3,734,209 JBrowse link
G SDS serine dehydratase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:38,503,922...38,513,908
Ensembl chr14:38,503,930...38,513,880
JBrowse link
G SDSL serine dehydratase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:38,471,162...38,484,459
Ensembl chr14:38,471,165...38,484,155
JBrowse link
G TDH L-threonine 3-dehydrogenase involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
(MGI:5292271|PMID:21896756)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:21873635 PMID:21896756 GO_REF:0000024 MGI:5292271 NCBI chr14:14,577,009...14,597,695 JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACMSD aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chr15:17,121,950...17,164,005
Ensembl chr15:17,106,724...17,163,899
JBrowse link
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 3:97,580,756...97,595,033
Ensembl chr 3:97,580,851...97,595,021
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,401...54,946,202
JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr10:12,442,877...12,489,417
Ensembl chr10:12,431,982...12,490,409
JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000104 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,665...8,982,945
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,665...8,982,945
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:7236232 PMID:21873635 RGD:2303721 NCBI chr 8:44,708,722...44,725,954
Ensembl chr 8:44,708,746...44,740,980
JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,401...54,946,202
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:3587527|PMID:15866519)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:15866519 PMID:21873635 GO_REF:0000041 MGI:3587527 NCBI chr12:3,759,688...3,785,829
Ensembl chr12:3,759,708...3,785,836
JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753)
GO_Central
MGI
RGD
InterPro
PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 PMID:21873635 GO_REF:0000002 MGI:2151782 MGI:2156954 RGD:2290190 RGD:2290543 NCBI chr17:9,245,283...9,260,140
Ensembl chr17:9,245,196...9,260,491
JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:3712725|PMID:17499941)
(MGI:3719924|PMID:17671174)
GO_Central
MGI
Ensembl
PMID:17499941 PMID:17671174 PMID:21873635 GO_REF:0000107 MGI:3712725 MGI:3719924 NCBI chr17:9,277,039...9,344,405
Ensembl chr17:9,277,069...9,343,749
JBrowse link
G KYNU kynureninase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,665...8,982,945
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 NCBI chr 8:44,708,722...44,725,954
Ensembl chr 8:44,708,746...44,740,980
JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:2768248 PMID:21873635 RGD:1599052 NCBI chr 7:97,360,583...97,381,885
Ensembl chr 7:97,357,952...97,381,841
JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,352...17,402,204
JBrowse link
G ECHDC2 enoyl-CoA hydratase domain containing 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:159,326,146...159,347,178
Ensembl chr 6:159,326,150...159,349,471
JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr18:44,985,410...45,102,171
Ensembl chr18:44,985,425...45,208,347
JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr15:94,795,744...94,941,362
Ensembl chr15:94,785,453...94,941,381
JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX1 acyl-CoA oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,450,913...5,479,550
Ensembl chr12:5,428,360...5,479,544
JBrowse link
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,235...124,503,195
JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:71,123,187...71,180,758
Ensembl chr 5:71,122,320...71,180,723
JBrowse link
G ABCD3 ATP binding cassette subfamily D member 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:122,847,925...122,929,454
Ensembl chr 4:122,837,525...122,953,257
JBrowse link
G ABCD4 ATP binding cassette subfamily D member 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:97,568,193...97,585,693
Ensembl chr 7:97,567,712...97,585,679
JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2662022|PMID:12719378)
GO_Central
MGI
PMID:12719378 PMID:21873635 MGI:2662022 NCBI chr 1:121,530,449...121,578,994
Ensembl chr 1:121,526,295...121,579,121
JBrowse link
G SLC27A4 solute carrier family 27 member 4 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:3719310|PMID:17522045)
GO_Central
MGI
Ensembl
PMID:17522045 PMID:21873635 GO_REF:0000107 MGI:3719310 NCBI chr 1:268,773,792...268,788,208
Ensembl chr 1:268,756,680...268,788,791
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16579
    metabolic process 10421
      cellular metabolic process 9468
        organic acid metabolic process 884
          organic acid catabolic process 213
            carboxylic acid catabolic process 211
              L-ascorbic acid catabolic process 0
              N-acetylmuramic acid catabolic process 0
              N-acetylneuraminate catabolic process 4
              achromobactin catabolic process 0
              alginic acid catabolic process 0
              cellular amino acid catabolic process + 92
              cephalosporin C catabolic process 0
              dicarboxylic acid catabolic process + 14
              helvolic acid catabolic process 0
              leukotriene catabolic process + 2
              monocarboxylic acid catabolic process + 115
              phthalate catabolic process 0
              tricarboxylic acid catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 16579
    metabolic process 10421
      small molecule metabolic process 1606
        organic acid metabolic process 884
          oxoacid metabolic process 857
            carboxylic acid metabolic process 839
              carboxylic acid catabolic process 211
                L-ascorbic acid catabolic process 0
                N-acetylmuramic acid catabolic process 0
                N-acetylneuraminate catabolic process 4
                achromobactin catabolic process 0
                alginic acid catabolic process 0
                cellular amino acid catabolic process + 92
                cephalosporin C catabolic process 0
                dicarboxylic acid catabolic process + 14
                helvolic acid catabolic process 0
                leukotriene catabolic process + 2
                monocarboxylic acid catabolic process + 115
                phthalate catabolic process 0
                tricarboxylic acid catabolic process + 0
paths to the root