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ONTOLOGY REPORT - ANNOTATIONS


Term:carboxylic acid catabolic process
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Accession:GO:0046395 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups.
Synonyms:exact_synonym: carboxylic acid breakdown;   carboxylic acid catabolism;   carboxylic acid degradation


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carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pon1 paraoxonase 1 involved_in ISO (PMID:7638166) BHF-UCL PMID:7638166 NCBI chrNW_004955432:11,893,473...11,923,035
Ensembl chrNW_004955432:11,893,473...11,923,339
JBrowse link
G Pon3 paraoxonase 3 involved_in ISO (PMID:15772423) BHF-UCL PMID:15772423 NCBI chrNW_004955432:11,945,383...11,983,417
Ensembl chrNW_004955432:11,942,922...11,983,504
JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phyh phytanoyl-CoA 2-hydroxylase ISO RGD PMID:10588950 RGD:727286 NCBI chrNW_004955462:1,238,622...1,250,731
Ensembl chrNW_004955462:1,238,622...1,250,736
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) BHF-UCL PMID:21998747 NCBI chrNW_004955507:3,687,449...3,711,939
Ensembl chrNW_004955507:3,687,769...3,711,151
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) BHF-UCL PMID:24895913 NCBI chrNW_004955423:8,637,116...8,673,881
Ensembl chrNW_004955423:8,636,756...8,676,790
JBrowse link
G Fah fumarylacetoacetate hydrolase acts_upstream_of_or_within ISO (MGI:1929783|PMID:11209059) MGI PMID:11209059 MGI:1929783 NCBI chrNW_004955533:904,294...921,730
Ensembl chrNW_004955533:904,295...921,730
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in ISO PMID:1383204 BHF-UCL PMID:1383204 RGD:8553334 NCBI chrNW_004955455:13,797,557...13,978,402
Ensembl chrNW_004955455:13,797,545...13,972,566
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO (PMID:7504305)
(MGI:3807772|PMID:1383204)
BHF-UCL PMID:1383204 PMID:7504305 MGI:3807772 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO (PMID:1378832), (PMID:7488039) BHF-UCL PMID:1378832 PMID:7488039 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814
JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 ISO RGD PMID:15753084 RGD:8693655 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972
JBrowse link
G Arg2 arginase 2 ISO RGD PMID:15753084 RGD:8693655 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chrNW_004955411:35,142,415...35,163,234
Ensembl chrNW_004955411:35,143,735...35,163,276
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO (PMID:2241899) UniProt PMID:2241899 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in ISO (PMID:2567216) UniProt PMID:2567216 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chrNW_004955523:1,343,545...1,369,080
Ensembl chrNW_004955523:1,343,545...1,369,073
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) MGI PMID:14755340 MGI:3027291 NCBI chrNW_004955413:19,975,395...20,087,656
Ensembl chrNW_004955413:19,981,328...20,087,638
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) RGD
MGI
PMID:11733007 PMID:14755340 MGI:3027291 RGD:1582175 NCBI chrNW_004955559:1,785,253...1,796,838
Ensembl chrNW_004955559:1,785,253...1,797,899
JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha involved_in ISO (PMID:7883996) HGNC-UCL PMID:7883996 NCBI chrNW_004955555:334,253...357,417 JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta involved_in ISO (PMID:2022752) HGNC-UCL PMID:2022752 NCBI chrNW_004955411:8,427,875...8,626,564
Ensembl chrNW_004955411:8,437,548...8,628,363
JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chrNW_004955493:7,940,358...7,946,317
Ensembl chrNW_004955493:7,940,315...7,946,317
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chrNW_004955416:7,327,557...7,341,533
Ensembl chrNW_004955416:7,327,557...7,346,027
JBrowse link
G Slc25a44 solute carrier family 25 member 44 involved_in ISO (PMID:31435015)
(MGI:6359503|PMID:31435015)
UniProt PMID:31435015 MGI:6359503 NCBI chrNW_004955545:2,347,951...2,364,935
Ensembl chrNW_004955545:2,347,844...2,364,935
JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acads acyl-CoA dehydrogenase short chain ISO RGD PMID:3968063 RGD:2317678 NCBI chrNW_004955455:10,928,560...10,942,748
Ensembl chrNW_004955455:10,928,560...10,942,926
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004955468:5,284,650...5,291,706
Ensembl chrNW_004955468:5,280,804...5,292,483
JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520) UniProt PMID:18799520 PMID:29378847 MGI:6157214 MGI:6450264 NCBI chrNW_004955522:945,186...960,094
Ensembl chrNW_004955522:944,565...960,244
JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:16616139), (PMID:20603179)
(MGI:5442503|PMID:20603179)
UniProt PMID:16616139 PMID:20603179 MGI:5442503 NCBI chrNW_004955455:10,095,597...10,127,244
Ensembl chrNW_004955455:10,095,300...10,127,666
JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:20603179)
(MGI:5442503|PMID:20603179)
UniProt PMID:20603179 MGI:5442503 NCBI chrNW_004955411:35,142,415...35,163,234
Ensembl chrNW_004955411:35,143,735...35,163,276
JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
ISO PMID:22820017
(MGI:3588122|PMID:15769935)
UniProt
MGI
PMID:15769935 PMID:22820017 MGI:3588122 RGD:13825440 NCBI chrNW_004955464:12,715,238...12,729,034
Ensembl chrNW_004955464:12,714,717...12,729,662
JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:18544534) UniProt PMID:18544534 NCBI chrNW_004955455:10,095,597...10,127,244
Ensembl chrNW_004955455:10,095,300...10,127,666
JBrowse link
dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot8 acyl-CoA thioesterase 8 involved_in ISO (PMID:16141203) UniProt PMID:16141203 NCBI chrNW_004955445:11,434,649...11,454,806
Ensembl chrNW_004955445:11,434,082...11,454,806
JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hacl1 2-hydroxyacyl-CoA lyase 1 involved_in ISO (PMID:10468558), (PMID:15644336), (PMID:21708296), (PMID:28289220)
(MGI:6105330|PMID:28629946)
HGNC-UCL
UniProt
PMID:10468558 PMID:15644336 PMID:21708296 PMID:28289220 PMID:28629946 MGI:6105330 RGD:708588 NCBI chrNW_004955430:2,055,774...2,096,260
Ensembl chrNW_004955430:2,053,640...2,096,432
JBrowse link
G Hao1 hydroxyacid oxidase 1 involved_in ISO (PMID:18215067) UniProt PMID:18215067 NCBI chrNW_004955415:17,981,791...18,035,151
Ensembl chrNW_004955415:17,981,791...18,035,224
JBrowse link
G Ilvbl ilvB acetolactate synthase like involved_in ISO (PMID:28289220) UniProt PMID:28289220 NCBI chrNW_004955495:8,130,875...8,140,152
Ensembl chrNW_004955495:8,130,875...8,140,146
JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO (MGI:2670243|PMID:12897163) MGI PMID:12897163 MGI:2670243 NCBI chrNW_004955424:22,799,568...22,830,718
Ensembl chrNW_004955424:22,799,568...22,830,718
JBrowse link
G Phyh phytanoyl-CoA 2-hydroxylase acts_upstream_of_or_within
involved_in
ISO (MGI:1097297|PMID:9326939), (MGI:3052413|PMID:12915479)
(PMID:16186124), (PMID:9326939)
RGD
MGI
UniProt
PMID:9326939 PMID:10588950 PMID:12915479 PMID:16186124 MGI:1097297 MGI:3052413 RGD:727286 NCBI chrNW_004955462:1,238,622...1,250,731
Ensembl chrNW_004955462:1,238,622...1,250,736
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO (PMID:10198260) UniProt PMID:10198260 NCBI chrNW_004955409:4,077,685...4,112,828
Ensembl chrNW_004955409:4,077,149...4,112,828
JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:17542813), (PMID:9425230)
(MGI:5315378|PMID:10196381)
(PMID:18757502), (PMID:21145416)
(PMID:23671276)
UniProt PMID:9425230 PMID:10196381 PMID:17542813 PMID:18757502 PMID:21145416 More... MGI:5315378 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO (PMID:21145416)
(MGI:5315378|PMID:10196381)
UniProt PMID:10196381 PMID:21145416 MGI:5315378 NCBI chrNW_004955505:717,800...769,702
Ensembl chrNW_004955505:721,222...798,470
JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO (PMID:9425230)
(PMID:24333844)
UniProt PMID:9425230 PMID:24333844 NCBI chrNW_004955423:280,497...359,711
Ensembl chrNW_004955423:280,497...359,711
JBrowse link
G Acaa2 acetyl-CoA acyltransferase 2 ISO RGD PMID:11879205 RGD:2317624 NCBI chrNW_004955402:34,857,317...34,885,169
Ensembl chrNW_004955402:34,857,317...34,885,169
JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO (PMID:2393404) UniProt PMID:2393404 NCBI chrNW_004955423:17,173,648...17,199,189
Ensembl chrNW_004955423:17,172,779...17,199,090
JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain ISO RGD PMID:8034667 RGD:631729 NCBI chrNW_004955467:9,684,070...9,689,454
Ensembl chrNW_004955467:9,684,250...9,689,356
JBrowse link
G Acox2 acyl-CoA oxidase 2 ISO RGD PMID:1400324 PMID:8654595 RGD:2299949 RGD:2299971 NCBI chrNW_004955430:1,638,931...1,665,308
Ensembl chrNW_004955430:1,638,431...1,665,141
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing acts_upstream_of_or_within ISO (MGI:2387247|PMID:12151381) MGI PMID:12151381 MGI:2387247 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402
JBrowse link
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in ISO (PMID:16380372) HGNC-UCL PMID:16380372 NCBI chrNW_004955496:5,518,403...5,534,325
Ensembl chrNW_004955496:5,518,245...5,538,669
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO RGD PMID:31901136 PMID:31953200 RGD:25823178 RGD:25823179 NCBI chrNW_004955422:17,105,887...17,159,696
Ensembl chrNW_004955422:17,109,256...17,159,838
JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in ISO (PMID:20538056) RGD
UniProt
PMID:10380116 PMID:10796071 PMID:20538056 RGD:21410186 RGD:2326088 NCBI chrNW_004955464:5,942,986...5,970,325
Ensembl chrNW_004955464:5,942,986...5,970,345
JBrowse link
G Crot carnitine O-octanoyltransferase involved_in ISO (PMID:21619872) UniProt PMID:21619872 NCBI chrNW_004955607:379,121...413,394
Ensembl chrNW_004955607:378,439...413,394
JBrowse link
G Decr1 2,4-dienoyl-CoA reductase 1 involved_in ISO (PMID:15531764) UniProt PMID:15531764 NCBI chrNW_004955417:6,893,231...6,931,754
Ensembl chrNW_004955417:6,893,231...6,931,754
JBrowse link
G Echs1 enoyl-CoA hydratase, short chain 1 involved_in ISO (PMID:26251176) RGD
UniProt
PMID:12379132 PMID:26251176 RGD:2317616 NCBI chrNW_004955477:11,012,451...11,021,487
Ensembl chrNW_004955477:11,012,451...11,021,486
JBrowse link
G Eci1 enoyl-CoA delta isomerase 1 involved_in
acts_upstream_of_or_within
ISO PMID:11781327
(MGI:2180251|PMID:11916962)
UniProt
MGI
PMID:11781327 PMID:11916962 MGI:2180251 RGD:2306199 NCBI chrNW_004955442:15,010,412...15,027,014
Ensembl chrNW_004955442:15,010,412...15,027,014
JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 ISO RGD PMID:11781327 RGD:2306199 NCBI chrNW_004955465:9,297,794...9,314,409
Ensembl chrNW_004955465:9,296,973...9,314,942
JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase involved_in ISO (PMID:11489939)
(PMID:2817332)
RGD
UniProt
PMID:2817332 PMID:11489939 PMID:17491019 RGD:2302227 NCBI chrNW_004955496:1,835,034...1,861,410
Ensembl chrNW_004955496:1,835,034...1,861,407
JBrowse link
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha acts_upstream_of_or_within ISO (MGI:2135592|PMID:11390422) RGD
MGI
PMID:1730633 PMID:11390422 MGI:2135592 RGD:1600572 NCBI chrNW_004955469:8,183,945...8,233,869
Ensembl chrNW_004955469:8,183,945...8,233,869
JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ISO RGD PMID:1730633 RGD:1600572 NCBI chrNW_004955469:8,233,980...8,272,149
Ensembl chrNW_004955469:8,233,980...8,274,450
JBrowse link
G Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 involved_in ISO (PMID:12917011) UniProt PMID:12917011 NCBI chrNW_004955475:478,690...481,029
Ensembl chrNW_004955475:478,690...481,029
JBrowse link
G Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 involved_in
acts_upstream_of_or_within
ISO (PMID:10400999), (PMID:10706581), (PMID:15060085), (PMID:9482850)
(MGI:3711634|PMID:17442273)
UniProt
MGI
PMID:9482850 PMID:10400999 PMID:10706581 PMID:15060085 PMID:17442273 MGI:3711634 NCBI chrNW_004955408:39,041,028...39,136,867
Ensembl chrNW_004955408:39,040,840...39,138,338
JBrowse link
G Lep leptin acts_upstream_of_or_within ISO (MGI:5444071|PMID:22958918) MGI PMID:22958918 MGI:5444071 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISO (PMID:10528859), (PMID:9765053) UniProt PMID:9765053 PMID:10528859 NCBI chrNW_004955444:3,811,972...3,830,666
Ensembl chrNW_004955444:3,811,973...3,830,666
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO (MGI:1096198|PMID:9288097)
(MGI:3711634|PMID:17442273)
MGI PMID:9288097 PMID:17442273 MGI:1096198 MGI:3711634 NCBI chrNW_004955413:4,736,189...4,755,559
Ensembl chrNW_004955413:4,736,189...4,755,766
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within ISO (MGI:3052413|PMID:12915479) MGI PMID:12915479 MGI:3052413 NCBI chrNW_004955439:71,302...138,278
Ensembl chrNW_004955439:71,302...138,278
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO (MGI:5444071|PMID:22958918) MGI PMID:22958918 MGI:5444071 NCBI chrNW_004955452:7,392,644...7,417,204
Ensembl chrNW_004955452:7,393,007...7,417,304
JBrowse link
G Slc25a17 solute carrier family 25 member 17 involved_in ISO (PMID:12445829) BHF-UCL PMID:12445829 NCBI chrNW_004955413:26,423,805...26,474,158
Ensembl chrNW_004955413:26,421,834...26,474,199
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO (PMID:10198260) UniProt PMID:10198260 NCBI chrNW_004955409:4,077,685...4,112,828
Ensembl chrNW_004955409:4,077,149...4,112,828
JBrowse link
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad11 acyl-CoA dehydrogenase family member 11 involved_in ISO (PMID:21237683) UniProt PMID:21237683 NCBI chrNW_004955501:5,871,328...5,952,786
Ensembl chrNW_004955501:5,871,113...5,952,909
JBrowse link
G Acadl acyl-CoA dehydrogenase long chain involved_in ISO (MGI:3526480|PMID:15639194) RGD
BHF-UCL
PMID:3968063 PMID:15639194 MGI:3526480 RGD:2317678 NCBI chrNW_004955457:5,266,032...5,300,632
Ensembl chrNW_004955457:5,266,033...5,300,056
JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO (MGI:4412440|PMID:18459129)
(PMID:16972171)
(PMID:1902818), (PMID:19224950), (PMID:25416781), (PMID:3597357)
RGD
BHF-UCL
PMID:1902818 PMID:3597357 PMID:3968063 PMID:16972171 PMID:18459129 More... MGI:4412440 RGD:2317678 NCBI chrNW_004955423:17,173,648...17,199,189
Ensembl chrNW_004955423:17,172,779...17,199,090
JBrowse link
G Acads acyl-CoA dehydrogenase short chain involved_in ISO (PMID:3597357) RGD
BHF-UCL
PMID:3597357 PMID:3968063 RGD:2317678 NCBI chrNW_004955455:10,928,560...10,942,748
Ensembl chrNW_004955455:10,928,560...10,942,926
JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain involved_in ISO (PMID:7668252)
(MGI:3526480|PMID:15639194)
(PMID:9599005)
BHF-UCL
UniProt
PMID:7668252 PMID:9599005 PMID:15639194 MGI:3526480 NCBI chrNW_004955467:9,684,070...9,689,454
Ensembl chrNW_004955467:9,684,250...9,689,356
JBrowse link
G Etfa electron transfer flavoprotein subunit alpha involved_in ISO (PMID:25416781) UniProt PMID:25416781 NCBI chrNW_004955450:1,392,526...1,451,591
Ensembl chrNW_004955450:1,392,479...1,451,591
JBrowse link
G Etfb electron transfer flavoprotein subunit beta involved_in ISO (PMID:25416781)
(MGI:5700285|PMID:25023281)
UniProt PMID:25023281 PMID:25416781 MGI:5700285 NCBI chrNW_004955558:1,032,743...1,046,300
Ensembl chrNW_004955558:1,032,743...1,046,300
JBrowse link
G Etfdh electron transfer flavoprotein dehydrogenase involved_in ISO (PMID:17412732) BHF-UCL PMID:17412732 NCBI chrNW_004955471:12,282,601...12,308,792
Ensembl chrNW_004955471:12,289,857...12,348,167
JBrowse link
G Gcdh glutaryl-CoA dehydrogenase involved_in ISO (PMID:25416781) UniProt PMID:25416781 NCBI chrNW_004955415:31,952,400...31,958,067
Ensembl chrNW_004955415:31,952,580...31,961,615
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:3597357) BHF-UCL PMID:3597357 NCBI chrNW_004955416:7,327,557...7,341,533
Ensembl chrNW_004955416:7,327,557...7,346,027
JBrowse link
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acox1 acyl-CoA oxidase 1 involved_in ISO (PMID:18536048) RGD
BHF-UCL
PMID:1400324 PMID:18536048 RGD:2299949 NCBI chrNW_004955506:6,286,824...6,309,764
Ensembl chrNW_004955506:6,286,648...6,312,716
JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in ISO (PMID:27884763) UniProt PMID:27884763 NCBI chrNW_004955430:1,638,931...1,665,308
Ensembl chrNW_004955430:1,638,431...1,665,141
JBrowse link
G Acox3 acyl-CoA oxidase 3, pristanoyl ISO RGD PMID:1400324 PMID:8026493 PMID:8654595 RGD:2299949 RGD:2299969 RGD:2299971 NCBI chrNW_004955514:2,653,502...2,690,452
Ensembl chrNW_004955514:2,656,144...2,685,896
JBrowse link
G Crat carnitine O-acetyltransferase involved_in ISO (PMID:23485643) UniProt PMID:23485643 NCBI chrNW_004955570:1,417,608...1,428,720
Ensembl chrNW_004955570:1,417,608...1,428,720
JBrowse link
fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase long chain acts_upstream_of_or_within ISO (MGI:5660099|PMID:21151927) MGI PMID:21151927 MGI:5660099 NCBI chrNW_004955457:5,266,032...5,300,632
Ensembl chrNW_004955457:5,266,033...5,300,056
JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain acts_upstream_of_or_within ISO (MGI:5660099|PMID:21151927) MGI PMID:21151927 MGI:5660099 NCBI chrNW_004955467:9,684,070...9,689,454
Ensembl chrNW_004955467:9,684,250...9,689,356
JBrowse link
G Acot7 acyl-CoA thioesterase 7 acts_upstream_of_or_within ISO (MGI:2158988|PMID:11834298) MGI PMID:11834298 MGI:2158988 NCBI chrNW_004955486:6,188,102...6,258,230
Ensembl chrNW_004955486:6,188,102...6,259,110
JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in ISO (PMID:32169171) UniProt PMID:32169171 NCBI chrNW_004955506:6,286,824...6,309,764
Ensembl chrNW_004955506:6,286,648...6,312,716
JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 involved_in ISO (PMID:10419495) UniProt PMID:10419495 NCBI chrNW_004955465:9,297,794...9,314,409
Ensembl chrNW_004955465:9,296,973...9,314,942
JBrowse link
G Faah fatty acid amide hydrolase involved_in ISO (PMID:9122178) UniProt PMID:9122178 NCBI chrNW_004955464:11,873,368...11,885,366
Ensembl chrNW_004955464:11,873,368...11,885,369
JBrowse link
G Lep leptin ISO RGD PMID:12058043 RGD:625499 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Lpin1 lipin 1 involved_in ISO (MGI:3770090|PMID:16950137) UniProt PMID:16950137 MGI:3770090 NCBI chrNW_004955487:6,139,188...6,207,316
Ensembl chrNW_004955487:6,138,926...6,210,012
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chrNW_004955533:720,255...756,893 JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISO (PMID:11561735) UniProt PMID:11561735 NCBI chrNW_004955442:9,422,849...9,516,054
Ensembl chrNW_004955442:9,422,849...9,516,103
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within
ISO (PMID:9683595)
(MGI:2151301|PMID:11544478), (MGI:3050939|PMID:15262267)
(PMID:15037717)
UniProt
MGI
PMID:9683595 PMID:11544478 PMID:15037717 PMID:15262267 MGI:2151301 MGI:3050939 NCBI chrNW_004955483:2,467,425...2,494,416
Ensembl chrNW_004955483:2,467,425...2,494,416
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875), (PMID:6121377) BHF-UCL PMID:6121377 PMID:11032875 NCBI chrNW_004955510:5,987,811...6,021,001 JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) RGD
MGI
PMID:4193185 PMID:16489927 MGI:53641 RGD:13504861 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) RGD
MGI
PMID:4193185 PMID:16489927 MGI:53641 RGD:13504861 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase iron containing 1 involved_in ISO (PMID:16435184) UniProt PMID:16435184 NCBI chrNW_004955444:12,706,404...12,745,106 JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 ISO RGD PMID:8999827 RGD:1625237 NCBI chrNW_004955429:3,092,977...3,170,128
Ensembl chrNW_004955429:3,096,453...3,169,259
JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in
acts_upstream_of_or_within
ISO (PMID:22049910)
(MGI:5320252|PMID:22228304)
(MGI:3623875|PMID:16641247)
UniProt
MGI
PMID:16641247 PMID:22049910 PMID:22228304 MGI:3623875 MGI:5320252 NCBI chrNW_004955403:8,195,241...8,261,402
Ensembl chrNW_004955403:8,195,255...8,261,402
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chrNW_004955447:14,552,846...14,607,416
Ensembl chrNW_004955447:14,574,407...14,607,416
JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gldc glycine decarboxylase involved_in ISO (PMID:28244183) UniProt PMID:28244183 NCBI chrNW_004955434:10,431,434...10,533,118
Ensembl chrNW_004955434:10,431,983...10,533,002
JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amt aminomethyltransferase involved_in ISO (PMID:16051266) UniProt PMID:16051266 NCBI chrNW_004955532:1,351,743...1,358,220
Ensembl chrNW_004955532:1,351,743...1,358,220
JBrowse link
G Gcsh glycine cleavage system protein H ISO RGD PMID:6402507 RGD:1598699 NCBI chrNW_004955522:3,858,156...3,869,730 JBrowse link
G Gldc glycine decarboxylase ISO RGD PMID:6778858 RGD:1642728 NCBI chrNW_004955434:10,431,434...10,533,118
Ensembl chrNW_004955434:10,431,983...10,533,002
JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in ISO (PMID:18215067) UniProt PMID:18215067 NCBI chrNW_004955415:17,981,791...18,035,151
Ensembl chrNW_004955415:17,981,791...18,035,224
JBrowse link
glyoxylate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:22198249) UniProt PMID:22198249 NCBI chrNW_004955542:710,506...720,564
Ensembl chrNW_004955542:710,005...717,741
JBrowse link
G Agxt2 alanine--glyoxylate aminotransferase 2 involved_in ISO (PMID:20018850) BHF-UCL PMID:20018850 NCBI chrNW_004955426:20,102,368...20,142,596
Ensembl chrNW_004955426:20,101,620...20,142,620
JBrowse link
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:20797690) UniProt PMID:20797690 NCBI chrNW_004955507:3,687,449...3,711,939
Ensembl chrNW_004955507:3,687,769...3,711,151
JBrowse link
histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hal histidine ammonia-lyase acts_upstream_of_or_within ISO (MGI:52899|PMID:8486363) MGI PMID:8486363 MGI:52899 NCBI chrNW_004955405:32,317,345...32,341,409
Ensembl chrNW_004955405:32,316,326...32,341,485
JBrowse link
G Hdc histidine decarboxylase involved_in
acts_upstream_of_or_within
ISO (PMID:22767596)
(MGI:2138019|PMID:11478947)
UniProt
MGI
PMID:11478947 PMID:22767596 MGI:2138019 NCBI chrNW_004955409:4,051,574...4,072,641
Ensembl chrNW_004955409:4,051,271...4,072,642
JBrowse link
G Uroc1 urocanate hydratase 1 involved_in ISO (PMID:19304569) BHF-UCL PMID:19304569 NCBI chrNW_004955421:21,734,910...21,765,754
Ensembl chrNW_004955421:21,732,262...21,765,772
JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in ISO (PMID:18776696), (PMID:24416422) BHF-UCL PMID:18776696 PMID:24416422 NCBI chrNW_004955407:38,924,355...38,939,790 JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO (PMID:11466310) BHF-UCL PMID:11466310 NCBI chrNW_004955504:5,412,290...5,435,409
Ensembl chrNW_004955504:5,413,586...5,435,645
JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-CoA dehydrogenase short/branched chain involved_in ISO (PMID:11013134) UniProt PMID:11013134 NCBI chrNW_004955477:1,177,704...1,213,347
Ensembl chrNW_004955477:1,177,680...1,213,347
JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:1979337), (PMID:8103405) BHF-UCL PMID:1979337 PMID:8103405 NCBI chrNW_004955412:10,350,088...10,369,806
Ensembl chrNW_004955412:10,349,593...10,369,806
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:3770498|PMID:17767905) RGD
MGI
PMID:11733007 PMID:17767905 MGI:3770498 RGD:1582175 NCBI chrNW_004955559:1,785,253...1,796,838
Ensembl chrNW_004955559:1,785,253...1,797,899
JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004955493:7,940,358...7,946,317
Ensembl chrNW_004955493:7,940,315...7,946,317
JBrowse link
G Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 involved_in ISO (PMID:18996107), (PMID:19706438) UniProt PMID:18996107 PMID:19706438 NCBI chrNW_004955475:478,690...481,029
Ensembl chrNW_004955475:478,690...481,029
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) UniProt PMID:17696873 PMID:18492492 PMID:22198249 NCBI chrNW_004955542:710,506...720,564
Ensembl chrNW_004955542:710,005...717,741
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine--glyoxylate aminotransferase 2 involved_in ISO (PMID:20018850) BHF-UCL PMID:20018850 NCBI chrNW_004955426:20,102,368...20,142,596
Ensembl chrNW_004955426:20,101,620...20,142,620
JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:18492492) UniProt PMID:18492492 NCBI chrNW_004955542:710,506...720,564
Ensembl chrNW_004955542:710,005...717,741
JBrowse link
G Cbs cystathionine beta-synthase involved_in ISO (PMID:15520012) UniProt PMID:15520012 NCBI chrNW_004955407:38,924,355...38,939,790 JBrowse link
G Cdo1 cysteine dioxygenase type 1 ISO RGD PMID:16611641 RGD:2301357 NCBI chrNW_004955408:35,593,981...35,605,189
Ensembl chrNW_004955408:35,593,767...35,605,189
JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chrNW_004955458:423,156...449,763
Ensembl chrNW_004955458:423,085...433,429
JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chrNW_004955458:423,156...449,763
Ensembl chrNW_004955458:423,085...433,429
JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (MGI:1350812|PMID:10567240) MGI PMID:10567240 MGI:1350812 NCBI chrNW_004955479:3,746,003...3,805,835
Ensembl chrNW_004955479:3,742,757...3,814,338
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO (PMID:10642506) UniProt PMID:10642506 NCBI chrNW_004955481:4,128,503...4,225,027
Ensembl chrNW_004955481:4,128,509...4,143,334
JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034
JBrowse link
G Qdpr quinoid dihydropteridine reductase ISO RGD PMID:4155291 RGD:5128604 NCBI chrNW_004955480:6,646,088...6,666,866
Ensembl chrNW_004955480:6,646,088...6,669,526
JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in ISO (PMID:18776696) UniProt PMID:18776696 NCBI chrNW_004955407:38,924,355...38,939,790 JBrowse link
G Sds serine dehydratase involved_in ISO (PMID:15689518), (PMID:18342636) UniProt PMID:15689518 PMID:18342636 NCBI chrNW_004955482:9,646,523...9,653,471
Ensembl chrNW_004955482:9,643,919...9,653,375
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:17482557) UniProt PMID:17482557 NCBI chrNW_004955478:10,972,791...11,001,535
Ensembl chrNW_004955478:10,978,139...11,001,202
JBrowse link
lactate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldhd lactate dehydrogenase D involved_in ISO (PMID:30931947) UniProt PMID:30931947 NCBI chrNW_004955484:2,461,545...2,466,702
Ensembl chrNW_004955484:2,460,762...2,466,702
JBrowse link
leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004955493:7,940,358...7,946,317
Ensembl chrNW_004955493:7,940,315...7,946,317
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268)
PMID:6401713
UniProt
BHF-UCL
PMID:6401713 PMID:7640268 RGD:8554099 NCBI chrNW_004955416:7,327,557...7,341,533
Ensembl chrNW_004955416:7,327,557...7,346,027
JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:18757502)
(PMID:23671276)
UniProt PMID:18757502 PMID:23671276 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774
JBrowse link
G Acadl acyl-CoA dehydrogenase long chain ISO RGD PMID:3968063 RGD:2317678 NCBI chrNW_004955457:5,266,032...5,300,632
Ensembl chrNW_004955457:5,266,033...5,300,056
JBrowse link
G Adtrp androgen dependent TFPI regulating protein involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chrNW_004955465:2,721,171...2,823,368
Ensembl chrNW_004955465:2,742,169...2,809,790
JBrowse link
G Aig1 androgen induced 1 involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chrNW_004955436:17,056,630...17,285,022
Ensembl chrNW_004955436:17,056,843...17,285,022
JBrowse link
G Lipe lipase E, hormone sensitive type acts_upstream_of_or_within ISO (MGI:3654969|PMID:16804080) MGI PMID:16804080 MGI:3654969 NCBI chrNW_004955555:511,085...531,165
Ensembl chrNW_004955555:514,410...530,759
JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO (PMID:21642549), (PMID:21846720) UniProt PMID:21642549 PMID:21846720 NCBI chrNW_004955541:2,837,487...2,876,220
Ensembl chrNW_004955541:2,837,448...2,876,316
JBrowse link
medium-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO (PMID:1970566) RGD
BHF-UCL
PMID:1970566 PMID:3968063 RGD:2317678 NCBI chrNW_004955423:17,173,648...17,199,189
Ensembl chrNW_004955423:17,172,779...17,199,090
JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in ISO (PMID:10677294) UniProt PMID:10677294 NCBI chrNW_004955510:283,860...300,991
Ensembl chrNW_004955510:281,331...300,985
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) BHF-UCL PMID:19278978 NCBI chrNW_004955406:39,552,034...39,645,694
Ensembl chrNW_004955406:39,552,019...39,645,694
JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3530688|PMID:15677334), (MGI:3629477|PMID:12920182) UniProt PMID:12920182 PMID:15677334 MGI:3530688 MGI:3629477 NCBI chrNW_004955455:10,282,308...10,427,439
Ensembl chrNW_004955455:10,308,192...10,426,076
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Cnr1 cannabinoid receptor 1 ISO RGD PMID:19724020 RGD:2314644 NCBI chrNW_004955411:15,052,151...15,077,320
Ensembl chrNW_004955411:15,052,163...15,077,320
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:11485163 RGD:2316274 NCBI chrNW_004955459:10,342,528...10,347,700
Ensembl chrNW_004955459:10,342,251...10,347,733
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A acts_upstream_of_or_within ISO (MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:5474727 NCBI chrNW_004955452:17,430,850...17,443,830
Ensembl chrNW_004955452:17,430,219...17,443,830
JBrowse link
G Pink1 PTEN induced kinase 1 ISO RGD PMID:25421206 RGD:11560775 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125
JBrowse link
G Plin5 perilipin 5 involved_in ISO (MGI:5440401|PMID:22532565)
(MGI:5559662|PMID:22675471), (MGI:5559666|PMID:21885430)
UniProt PMID:21885430 PMID:22532565 PMID:22675471 MGI:5440401 MGI:5559662 MGI:5559666 NCBI chrNW_004955495:4,406,590...4,414,783
Ensembl chrNW_004955495:4,407,246...4,416,848
JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase involved_in ISO (PMID:25416781)
(MGI:5700285|PMID:25023281)
UniProt PMID:25023281 PMID:25416781 MGI:5700285 NCBI chrNW_004955411:35,999,583...36,025,805 JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otc ornithine transcarbamylase involved_in ISO (PMID:2556444), (PMID:8112735) BHF-UCL PMID:2556444 PMID:8112735 NCBI chrNW_004955601:481,524...543,176
Ensembl chrNW_004955601:481,480...543,176
JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pon3 paraoxonase 3 ISO RGD PMID:12946270 RGD:1303961 NCBI chrNW_004955432:11,945,383...11,983,417
Ensembl chrNW_004955432:11,942,922...11,983,504
JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:23123468)
(MGI:3835692|PMID:18854420), (MGI:3836690|PMID:18723473), (MGI:6189665|PMID:23123468)
UniProt PMID:18723473 PMID:18854420 PMID:23123468 MGI:3835692 MGI:3836690 MGI:6189665 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO (PMID:10196381)
(MGI:3835692|PMID:18854420), (MGI:3836690|PMID:18723473)
UniProt PMID:10196381 PMID:18723473 PMID:18854420 MGI:3835692 MGI:3836690 NCBI chrNW_004955505:717,800...769,702
Ensembl chrNW_004955505:721,222...798,470
JBrowse link
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chrNW_004955431:17,477,113...17,524,539
Ensembl chrNW_004955431:17,477,086...17,524,539
JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004955578:950,258...1,004,438
Ensembl chrNW_004955578:967,593...1,004,438
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO RGD PMID:19302064 RGD:2311346 NCBI chrNW_004955422:17,105,887...17,159,696
Ensembl chrNW_004955422:17,109,256...17,159,838
JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004955453:7,685,715...7,742,262
Ensembl chrNW_004955453:7,685,715...7,742,262
JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004955404:2,531,484...2,555,383
Ensembl chrNW_004955404:2,531,484...2,555,689
JBrowse link
G Plin5 perilipin 5 involved_in ISO PMID:22127648
(MGI:3709110|PMID:17130488)
UniProt PMID:17130488 PMID:22127648 MGI:3709110 RGD:8553692 NCBI chrNW_004955495:4,406,590...4,414,783
Ensembl chrNW_004955495:4,407,246...4,416,848
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20007935) BHF-UCL PMID:20007935 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:16616139) UniProt PMID:16616139 NCBI chrNW_004955455:10,095,597...10,127,244
Ensembl chrNW_004955455:10,095,300...10,127,666
JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qprt quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within
ISO (PMID:24038671), (PMID:3409840), (PMID:9473669)
(PMID:9473669)
UniProt
MGI
PMID:3409840 PMID:9473669 PMID:24038671 NCBI chrNW_004955493:7,225,472...7,243,078
Ensembl chrNW_004955493:7,224,983...7,242,852
JBrowse link
regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 involved_in ISO (MGI:5442473|PMID:22619174) UniProt PMID:22619174 MGI:5442473 NCBI chrNW_004955449:5,412,958...5,511,629
Ensembl chrNW_004955449:5,412,876...5,512,701
JBrowse link
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (MGI:1095802|PMID:9256488), (MGI:1101351|PMID:9418970), (MGI:5635749|PMID:25255441), (MGI:87573|PMID:9126326) UniProt PMID:9126326 PMID:9256488 PMID:9418970 PMID:25255441 MGI:1095802 MGI:1101351 MGI:5635749 MGI:87573 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774
JBrowse link
G Lonp2 lon peptidase 2, peroxisomal involved_in ISO (PMID:22002062) UniProt PMID:22002062 NCBI chrNW_004955474:6,991,371...7,084,008
Ensembl chrNW_004955474:6,991,371...7,084,008
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Tysnd1 trypsin like peroxisomal matrix peptidase 1 involved_in ISO (PMID:22002062) UniProt PMID:22002062 NCBI chrNW_004955437:21,094,831...21,105,495
Ensembl chrNW_004955437:21,096,164...21,104,909
JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102016571 cytochrome P450 2W1 involved_in ISO (PMID:26936974) UniProt PMID:26936974 NCBI chrNW_004955460:8,705,068...8,711,266
Ensembl chrNW_004955460:8,705,068...8,712,121
JBrowse link
G LOC102023166 cytochrome P450 26B1 involved_in ISO (PMID:10823918) RGD
BHF-UCL
PMID:10823918 PMID:21138835 RGD:6771354 NCBI chrNW_004955424:13,336,189...13,355,368
Ensembl chrNW_004955424:13,336,189...13,355,423
JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase acts_upstream_of_or_within ISO (MGI:2183618|PMID:12023972) RGD
MGI
PMID:11741948 PMID:12023972 MGI:2183618 RGD:730275 NCBI chrNW_004955422:26,992,295...27,013,100
Ensembl chrNW_004955422:26,992,295...27,013,100
JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chrNW_004955440:2,348,434...2,412,706
Ensembl chrNW_004955440:2,348,396...2,412,706
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034
JBrowse link
G Kynu kynureninase involved_in ISO (PMID:17334708) UniProt PMID:17334708 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004955471:11,229,795...11,245,255
Ensembl chrNW_004955471:11,229,273...11,245,375
JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:32818467), (PMID:32866000) UniProt PMID:32818467 PMID:32866000 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase acts_upstream_of_or_within ISO (MGI:3587527|PMID:15866519) MGI PMID:15866519 MGI:3587527 NCBI chrNW_004955506:4,351,623...4,379,528
Ensembl chrNW_004955506:4,365,926...4,379,447
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO (MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753) RGD
MGI
PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 MGI:2151782 MGI:2156954 RGD:2290190 RGD:2290543 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:17671174)
(MGI:3719924|PMID:17671174)
(MGI:3712725|PMID:17499941)
UniProt
MGI
PMID:17499941 PMID:17671174 MGI:3712725 MGI:3719924 NCBI chrNW_004955536:2,894,410...2,938,862
Ensembl chrNW_004955536:2,894,308...2,939,016
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in ISO (PMID:27762317) UniProt PMID:27762317 NCBI chrNW_004955471:11,229,795...11,245,255
Ensembl chrNW_004955471:11,229,273...11,245,375
JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family member A1 involved_in ISO (PMID:23835272) RGD
BHF-UCL
PMID:2768248 PMID:23835272 RGD:1599052 NCBI chrNW_004955523:1,343,545...1,369,080
Ensembl chrNW_004955523:1,343,545...1,369,073
JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004955493:7,940,358...7,946,317
Ensembl chrNW_004955493:7,940,315...7,946,317
JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in ISO (PMID:16466957) UniProt PMID:16466957 NCBI chrNW_004955410:29,180,411...29,294,273
Ensembl chrNW_004955410:29,180,184...29,294,315
JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acox1 acyl-CoA oxidase 1 involved_in ISO (PMID:32169171) UniProt PMID:32169171 NCBI chrNW_004955506:6,286,824...6,309,764
Ensembl chrNW_004955506:6,286,648...6,312,716
JBrowse link
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:18757502)
(MGI:3836690|PMID:18723473)
PMID:25043761
(PMID:21145416)
(PMID:9425230)
UniProt PMID:9425230 PMID:18723473 PMID:18757502 PMID:21145416 PMID:25043761 MGI:3836690 RGD:13673760 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO PMID:25043761
(MGI:3836690|PMID:18723473)
(PMID:21145416)
UniProt PMID:18723473 PMID:21145416 PMID:25043761 MGI:3836690 RGD:13673760 NCBI chrNW_004955505:717,800...769,702
Ensembl chrNW_004955505:721,222...798,470
JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO (PMID:9425230) UniProt PMID:9425230 NCBI chrNW_004955423:280,497...359,711
Ensembl chrNW_004955423:280,497...359,711
JBrowse link
G Slc27a2 solute carrier family 27 member 2 acts_upstream_of_or_within ISO (MGI:2662022|PMID:12719378) MGI PMID:12719378 MGI:2662022 NCBI chrNW_004955409:4,077,685...4,112,828
Ensembl chrNW_004955409:4,077,149...4,112,828
JBrowse link
G Slc27a4 solute carrier family 27 member 4 acts_upstream_of_or_within ISO (MGI:3719310|PMID:17522045) MGI PMID:17522045 MGI:3719310 NCBI chrNW_004955570:853,856...866,383
Ensembl chrNW_004955570:853,849...866,383
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11978
    metabolic process 7560
      cellular metabolic process 6950
        organic acid metabolic process 639
          organic acid catabolic process 142
            carboxylic acid catabolic process 138
              L-ascorbic acid catabolic process 0
              N-acetylmuramic acid catabolic process 0
              N-acetylneuraminate catabolic process 0
              achromobactin catabolic process 0
              alginic acid catabolic process 0
              cellular amino acid catabolic process + 59
              cephalosporin C catabolic process 0
              dicarboxylic acid catabolic process + 10
              helvolic acid catabolic process 0
              leukotriene catabolic process + 0
              monocarboxylic acid catabolic process + 79
              phthalate catabolic process 0
              tricarboxylic acid catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 11978
    metabolic process 7560
      small molecule metabolic process 1204
        organic acid metabolic process 639
          oxoacid metabolic process 617
            carboxylic acid metabolic process 612
              carboxylic acid catabolic process 138
                L-ascorbic acid catabolic process 0
                N-acetylmuramic acid catabolic process 0
                N-acetylneuraminate catabolic process 0
                achromobactin catabolic process 0
                alginic acid catabolic process 0
                cellular amino acid catabolic process + 59
                cephalosporin C catabolic process 0
                dicarboxylic acid catabolic process + 10
                helvolic acid catabolic process 0
                leukotriene catabolic process + 0
                monocarboxylic acid catabolic process + 79
                phthalate catabolic process 0
                tricarboxylic acid catabolic process + 0
paths to the root