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ONTOLOGY REPORT - ANNOTATIONS

Term:carboxylic acid catabolic process
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Accession:GO:0046395 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups.
Synonyms:exact_synonym: carboxylic acid breakdown;   carboxylic acid catabolism;   carboxylic acid degradation


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carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON1 paraoxonase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:87,253,476...87,279,650
Ensembl chr 7:100,841,286...100,867,493 		JBrowse link
G PON3 paraoxonase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:87,314,788...87,354,020
Ensembl chr 7:100,902,432...100,941,611 		JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:19933275), (PMID:21238436) UniProt
Ensembl		 PMID:19933275 PMID:21238436 GO_REF:0000107 NCBI chr11:100,969,185...100,990,296
Ensembl chr11:104,452,913...104,474,063 		JBrowse link
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:123,166,630...123,244,257
Ensembl chr 3:130,484,862...130,562,934 		JBrowse link
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chr12:102,596,881...102,661,617
Ensembl chr12:105,997,045...106,056,607 		JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHYH phytanoyl-CoA 2-hydroxylase ISO RGD PMID:10588950 RGD:727286 NCBI chr10:13,277,804...13,300,115
Ensembl chr10:13,251,223...13,636,018 		JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) BHF-UCL PMID:21998747 NCBI chr10:94,204,627...94,233,312 JBrowse link
amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOSF1 enolase superfamily member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:13,613,425...13,652,583
Ensembl chr18:17,256,489...17,294,287 		JBrowse link
G ETFA electron transfer flavoprotein subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:55,128,686...55,227,369
Ensembl chr15:74,720,198...74,818,494 		JBrowse link
G ETFB electron transfer flavoprotein subunit beta involved_in ISO (PMID:25416781) ComplexPortal PMID:25416781 NCBI chr19:48,281,101...48,301,527
Ensembl chr19:57,166,829...57,175,582 		JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) BHF-UCL PMID:24895913 NCBI chr 1:117,875,875...118,136,304 JBrowse link
G FAH fumarylacetoacetate hydrolase acts_upstream_of_or_within ISO (MGI:1929783|PMID:11209059) MGI PMID:11209059 MGI:1929783 NCBI chr15:59,121,657...59,155,229
Ensembl chr15:78,048,571...78,115,098 		JBrowse link
G NOS1 nitric oxide synthase 1 involved_in ISO PMID:1383204 BHF-UCL PMID:1383204 RGD:8553334 NCBI chr12:114,784,232...114,938,385
Ensembl chr12:118,163,655...118,314,005 		JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093 		JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:142,577,334...142,600,702
Ensembl chr 7:154,730,009...154,755,233 		JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 ISO RGD PMID:15753084 RGD:8693655 NCBI chr 6:129,372,747...129,383,880
Ensembl chr 6:133,479,966...133,491,162 		JBrowse link
G ARG2 arginase 2 ISO RGD PMID:15753084 RGD:8693655 NCBI chr14:48,197,831...48,231,829
Ensembl chr14:67,075,941...67,109,962 		JBrowse link
aromatic amino acid family catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAT tyrosine aminotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886 		JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:12753071 MGI
Ensembl		 PMID:12753071 GO_REF:0000107 RGD:1299508 NCBI chr11:57,700,104...57,750,371
Ensembl chr11:61,056,817...61,107,485 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chr 6:108,199,861...108,223,844
Ensembl chr 6:112,269,271...112,292,980 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378 		JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chr14:54,616,531...54,643,346
Ensembl chr14:73,472,255...73,495,734 		JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) MGI PMID:14755340 MGI:3027291 NCBI chr12:61,364,154...61,500,827
Ensembl chr12:63,978,116...64,107,463 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:3027291|PMID:14755340) RGD
Ensembl
MGI		 PMID:11733007 PMID:14755340 GO_REF:0000107 MGI:3027291 RGD:1582175 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887 		JBrowse link
G BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,391,618...38,418,826
Ensembl chr19:46,898,024...46,925,171 		JBrowse link
G BCKDHB branched chain keto acid dehydrogenase E1 subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:78,005,287...78,246,287
Ensembl chr 6:81,276,836...81,516,787 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chr16:23,856,349...23,860,586
Ensembl chr16:31,476,917...31,483,639 		JBrowse link
G DBT dihydrolipoamide branched chain transacylase E2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,852,585...102,907,146
Ensembl chr 1:101,567,551...101,621,850 		JBrowse link
G DLD dihydrolipoamide dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:99,872,020...99,901,884
Ensembl chr 7:112,593,934...112,623,629 		JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:28,166,127...28,299,845
Ensembl chr 7:27,763,021...27,896,598 		JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000043 NCBI chr2B:77,510,938...77,652,911 JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chr15:19,342,283...19,372,465
Ensembl chr15:37,596,688...37,609,902 		JBrowse link
G SLC25A44 solute carrier family 25 member 44 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:131,535,399...131,556,750
Ensembl chr 1:135,366,049...135,387,643 		JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain ISO RGD PMID:3968063 RGD:2317678 NCBI chr12:118,309,303...118,323,489
Ensembl chr12:121,682,113...121,696,376 		JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chr19:29,610,390...29,632,778 JBrowse link
G NUDT7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520) UniProt PMID:18799520 PMID:29378847 MGI:6157214 MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651 		JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in ISO (PMID:16616139), (PMID:20603179)
(MGI:5442503|PMID:20603179)		 UniProt PMID:16616139 PMID:20603179 MGI:5442503 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065 		JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA UniProt GO_REF:0000117 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065 		JBrowse link
G DDO D-aspartate oxidase involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 6:108,199,861...108,223,844
Ensembl chr 6:112,269,271...112,292,980 		JBrowse link
D-gluconate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDNK IDNK gluconokinase involved_in IEA UniProt GO_REF:0000041 NCBI chr 9:41,234,505...41,255,883
Ensembl chr 9:82,560,712...82,581,675 		JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3588122|PMID:15769935) MGI
Ensembl		 PMID:15769935 GO_REF:0000107 MGI:3588122 NCBI chr 1:44,853,867...44,871,764
Ensembl chr 1:46,211,859...46,230,072 		JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in ISO (PMID:18544534) UniProt PMID:18544534 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065 		JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARSB arylsulfatase B involved_in ISO (MGI:5608575|PMID:24240681) MGI PMID:24240681 MGI:5608575 NCBI chr 5:36,325,581...36,534,371
Ensembl chr 5:36,804,874...37,023,739 		JBrowse link
G HEXB hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:40,589,448...40,625,176
Ensembl chr 5:41,199,681...41,232,693 		JBrowse link
G IDS iduronate 2-sulfatase involved_in ISO (MGI:7310027|PMID:30064964) MGI PMID:30064964 MGI:7310027 NCBI chr  X:138,493,117...138,520,017
Ensembl chr  X:148,912,475...148,946,441 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4414887|PMID:19751987)
(MGI:4397742|PMID:19834056)		 MGI
Ensembl		 PMID:19751987 PMID:19834056 GO_REF:0000107 MGI:4397742 MGI:4414887 NCBI chr 4:1,102,288...1,120,973
Ensembl chr 4:1,020,582...1,037,877 		JBrowse link
G LOC100986229 CUGBP Elav-like family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:51,235,123...51,326,832
Ensembl chr15:70,057,943...70,090,688
Ensembl chr15:70,057,943...70,090,688 		JBrowse link
dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT4 acyl-CoA thioesterase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:54,150,843...54,155,119
Ensembl chr14:73,008,909...73,012,561 		JBrowse link
G ACOT8 acyl-CoA thioesterase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:42,180,734...42,196,466
Ensembl chr20:43,268,264...43,283,989 		JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HACL1 2-hydroxyacyl-CoA lyase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:15,486,897...15,526,552
Ensembl chr 3:15,823,979...15,863,982 		JBrowse link
G HAO1 hydroxyacid oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:7,856,967...7,914,818
Ensembl chr20:7,633,861...7,695,120 		JBrowse link
G ILVBL ilvB acetolactate synthase like involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:14,648,081...14,658,879
Ensembl chr19:15,632,614...15,643,414 		JBrowse link
G PEX13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2670243|PMID:12897163) MGI
Ensembl		 PMID:12897163 GO_REF:0000107 MGI:2670243 NCBI chr2A:61,108,970...61,143,615
Ensembl chr2A:62,250,887...62,285,151 		JBrowse link
G PHYH phytanoyl-CoA 2-hydroxylase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:1097297|PMID:9326939), (MGI:3052413|PMID:12915479) RGD
InterPro
Ensembl
MGI		 PMID:9326939 PMID:10588950 PMID:12915479 GO_REF:0000002 GO_REF:0000107 MGI:1097297 MGI:3052413 RGD:727286 NCBI chr10:13,277,804...13,300,115
Ensembl chr10:13,251,223...13,636,018 		JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:29,130,262...29,182,752
Ensembl chr15:47,452,227...47,505,066 		JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424 		JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:49,082,122...49,158,524
Ensembl chr12:49,941,914...50,011,140 		JBrowse link
G ABCD3 ATP binding cassette subfamily D member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:97,079,326...97,179,886
Ensembl chr 1:95,808,027...95,907,864 		JBrowse link
G ACAA1 acetyl-CoA acyltransferase 1 involved_in ISO (PMID:2365812), (PMID:2882519)
PMID:9325339		 UniProt PMID:2365812 PMID:2882519 PMID:9325339 RGD:21201257 RGD:8554082 NCBI chr 3:38,020,439...38,035,341 JBrowse link
G ACAA2 acetyl-CoA acyltransferase 2 ISO RGD PMID:11879205 RGD:2317624 NCBI chr18:43,164,504...43,195,038
Ensembl chr18:46,512,374...46,542,737 		JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:74,939,477...74,978,815
Ensembl chr 1:76,911,763...76,950,840 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO RGD PMID:8034667 RGD:631729 NCBI chr17:7,249,717...7,255,165
Ensembl chr17:7,234,283...7,242,417 		JBrowse link
G ACOX1 acyl-CoA oxidase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:69,890,817...69,928,342
Ensembl chr17:75,445,923...75,479,571 		JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:1400324 PMID:8654595 GO_REF:0000002 RGD:2299949 RGD:2299971 NCBI chr 3:58,442,532...58,474,601
Ensembl chr 3:59,852,771...59,884,548 		JBrowse link
G ACOX3 acyl-CoA oxidase 3, pristanoyl involved_in IEA InterPro GO_REF:0000002 Ensembl chr 4:8,432,788...8,494,157 JBrowse link
G ACOXL acyl-CoA oxidase like involved_in IEA InterPro GO_REF:0000002 NCBI chr2A:90,912,247...91,300,770
Ensembl chr2A:111,985,358...112,335,160 		JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2387247|PMID:12151381) MGI
Ensembl		 PMID:12151381 GO_REF:0000107 MGI:2387247 NCBI chr 3:183,876,051...183,889,723
Ensembl chr 3:192,341,320...192,354,885 		JBrowse link
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 acts_upstream_of_or_within_positive_effect
involved_in		 ISO
IEA		 (MGI:6489626|PMID:33168096) UniProt
Ensembl		 PMID:33168096 GO_REF:0000107 MGI:6489626 NCBI chr12:102,596,881...102,661,617
Ensembl chr12:105,997,045...106,056,607 		JBrowse link
G BDH2 3-hydroxybutyrate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:95,533,173...95,556,000
Ensembl chr 4:106,157,229...106,179,402 		JBrowse link
G CPT1A carnitine palmitoyltransferase 1A involved_in ISO
IEA		 RGD
UniProt		 PMID:31901136 PMID:31953200 GO_REF:0000041 RGD:25823178 RGD:25823179 NCBI chr11:63,841,028...63,928,242
Ensembl chr11:67,144,736...67,205,481 		JBrowse link
G CPT1B carnitine palmitoyltransferase 1B involved_in IEA UniProt GO_REF:0000041 NCBI chr22:30,815,073...30,825,341
Ensembl chr22:49,926,893...49,935,420 		JBrowse link
G CPT1C carnitine palmitoyltransferase 1C involved_in IEA UniProt GO_REF:0000041 NCBI chr19:46,705,711...46,727,996
Ensembl chr19:55,626,831...55,647,394 		JBrowse link
G CPT2 carnitine palmitoyltransferase 2 involved_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:10380116 PMID:10796071 GO_REF:0000041 GO_REF:0000107 RGD:21410186 RGD:2326088 NCBI chr 1:52,469,416...52,487,166
Ensembl chr 1:54,069,334...54,086,994 		JBrowse link
G CROT carnitine O-octanoyltransferase involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr 7:79,339,498...79,393,676
Ensembl chr 7:92,989,868...93,043,832 		JBrowse link
G DECR1 2,4-dienoyl-CoA reductase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:86,690,816...86,755,379
Ensembl chr 8:88,642,172...88,693,224 		JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:12379132 GO_REF:0000107 RGD:2317616 Ensembl chr10:134,278,388...134,289,308 JBrowse link
G ECI1 enoyl-CoA delta isomerase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2180251|PMID:11916962) MGI
Ensembl		 PMID:11916962 GO_REF:0000107 MGI:2180251 NCBI chr16:1,097,165...1,108,726
Ensembl chr16:2,339,864...2,351,385 		JBrowse link
G ECI2 enoyl-CoA delta isomerase 2 ISO RGD PMID:11781327 RGD:2306199 NCBI chr 6:3,948,748...3,968,634
Ensembl chr 6:4,137,353...4,157,538 		JBrowse link
G EHHADH enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3711634|PMID:17442273) MGI
UniProt
Ensembl		 PMID:17442273 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117 MGI:3711634 NCBI chr 3:182,228,520...182,319,339
Ensembl chr 3:190,704,695...190,796,075 		JBrowse link
G HADH hydroxyacyl-CoA dehydrogenase involved_in ISO (PMID:11489939)
(PMID:2817332)		 RGD
UniProt		 PMID:2817332 PMID:11489939 PMID:17491019 RGD:2302227 NCBI chr 4:100,495,205...100,540,589
Ensembl chr 4:111,067,336...111,113,868 		JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:2135592|PMID:11390422) RGD
UniProt
InterPro
Ensembl
MGI		 PMID:1730633 PMID:11390422 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117 MGI:2135592 RGD:1600572 NCBI chr2A:26,185,938...26,240,229
Ensembl chr2A:26,279,995...26,334,068 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in ISO
IEA		 RGD
Ensembl		 PMID:1730633 GO_REF:0000107 RGD:1600572 NCBI chr2A:26,240,365...26,285,982
Ensembl chr2A:26,334,043...26,379,059 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,645,849...45,649,039
Ensembl chr  X:53,754,164...53,757,643 		JBrowse link
G HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3711634|PMID:17442273) MGI
UniProt
Ensembl		 PMID:17442273 GO_REF:0000041 GO_REF:0000107 MGI:3711634 NCBI chr 5:114,842,892...114,928,559
Ensembl chr 5:120,628,605...120,713,860 		JBrowse link
G LEP leptin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5444071|PMID:22958918) MGI
Ensembl		 PMID:22958918 GO_REF:0000107 MGI:5444071 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519 		JBrowse link
G LOC100980944 delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr19:35,909,348...35,925,686
Ensembl chr19:44,479,561...44,489,355 		JBrowse link
G MTLN mitoregulin involved_in ISO (PMID:32243843) UniProt PMID:32243843 NCBI chr2A:91,481,706...91,514,106
Ensembl chr2A:111,713,514...111,713,933 		JBrowse link
G PEX2 peroxisomal biogenesis factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:73,508,349...73,526,560
Ensembl chr 8:75,146,255...75,147,172 		JBrowse link
G PEX5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1096198|PMID:9288097)
(MGI:3711634|PMID:17442273)		 MGI
Ensembl		 PMID:9288097 PMID:17442273 GO_REF:0000107 MGI:1096198 MGI:3711634 NCBI chr12:7,318,637...7,340,428
Ensembl chr12:7,235,049...7,255,815 		JBrowse link
G PEX7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3052413|PMID:12915479) MGI
Ensembl		 PMID:12915479 GO_REF:0000107 MGI:3052413 NCBI chr 6:134,582,933...134,675,388
Ensembl chr 6:138,672,179...138,762,830 		JBrowse link
G PPARD peroxisome proliferator activated receptor delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,903,798...34,987,208
Ensembl chr 6:36,003,988...36,081,132 		JBrowse link
G SCP2 sterol carrier protein 2 involved_in ISO PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr 1:52,195,491...52,324,227
Ensembl chr 1:53,797,254...53,924,939 		JBrowse link
G SESN2 sestrin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5444071|PMID:22958918) MGI
Ensembl		 PMID:22958918 GO_REF:0000107 MGI:5444071 NCBI chr 1:27,518,248...27,541,264
Ensembl chr 1:28,555,072...28,577,931 		JBrowse link
G SLC25A17 solute carrier family 25 member 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,665,210...21,714,596
Ensembl chr22:39,761,007...39,810,556 		JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:29,130,262...29,182,752
Ensembl chr15:47,452,227...47,505,066 		JBrowse link
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAD11 acyl-CoA dehydrogenase family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:129,631,105...129,732,894
Ensembl chr 3:137,107,834...137,209,550 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO (MGI:3526480|PMID:15639194) RGD
BHF-UCL		 PMID:3968063 PMID:15639194 MGI:3526480 RGD:2317678 NCBI chr2B:97,445,421...97,483,514
Ensembl chr2B:215,847,775...215,885,524 		JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in ISO
IEA		 RGD
Ensembl		 PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr 1:74,939,477...74,978,815
Ensembl chr 1:76,911,763...76,950,840 		JBrowse link
G ACADS acyl-CoA dehydrogenase short chain involved_in ISO
IEA		 RGD
Ensembl		 PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr12:118,309,303...118,323,489
Ensembl chr12:121,682,113...121,696,376 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,249,717...7,255,165
Ensembl chr17:7,234,283...7,242,417 		JBrowse link
G ETFA electron transfer flavoprotein subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:55,128,686...55,227,369
Ensembl chr15:74,720,198...74,818,494 		JBrowse link
G ETFB electron transfer flavoprotein subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:48,281,101...48,301,527
Ensembl chr19:57,166,829...57,175,582 		JBrowse link
G ETFDH electron transfer flavoprotein dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:150,992,123...151,028,698
Ensembl chr 4:162,802,917...162,838,807 		JBrowse link
G GCDH glutaryl-CoA dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,452,779...12,461,757
Ensembl chr19:13,195,241...13,204,223 		JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:3597357) BHF-UCL PMID:3597357 NCBI chr15:19,342,283...19,372,465
Ensembl chr15:37,596,688...37,609,902 		JBrowse link
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX1 acyl-CoA oxidase 1 involved_in ISO
IEA		 RGD
InterPro
Ensembl		 PMID:1400324 GO_REF:0000002 GO_REF:0000107 RGD:2299949 NCBI chr17:69,890,817...69,928,342
Ensembl chr17:75,445,923...75,479,571 		JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,442,532...58,474,601
Ensembl chr 3:59,852,771...59,884,548 		JBrowse link
G ACOX3 acyl-CoA oxidase 3, pristanoyl involved_in ISO
IEA		 RGD
InterPro		 PMID:1400324 PMID:8026493 PMID:8654595 GO_REF:0000002 RGD:2299949 RGD:2299969 RGD:2299971 Ensembl chr 4:8,432,788...8,494,157 JBrowse link
G CRAT carnitine O-acetyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:100,220,019...100,236,061
Ensembl chr 9:128,880,057...128,896,484 		JBrowse link
fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADL acyl-CoA dehydrogenase long chain acts_upstream_of_or_within ISO (MGI:5660099|PMID:21151927) MGI PMID:21151927 MGI:5660099 NCBI chr2B:97,445,421...97,483,514
Ensembl chr2B:215,847,775...215,885,524 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5660099|PMID:21151927) MGI
Ensembl		 PMID:21151927 GO_REF:0000107 MGI:5660099 NCBI chr17:7,249,717...7,255,165
Ensembl chr17:7,234,283...7,242,417 		JBrowse link
G ACOT7 acyl-CoA thioesterase 7 acts_upstream_of_or_within ISO (MGI:2158988|PMID:11834298) MGI PMID:11834298 MGI:2158988 NCBI chr 1:5,030,488...5,154,800 JBrowse link
G ACOX1 acyl-CoA oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:69,890,817...69,928,342
Ensembl chr17:75,445,923...75,479,571 		JBrowse link
G DECR2 2,4-dienoyl-CoA reductase 2 involved_in IEA InterPro GO_REF:0000002 Ensembl chr16:395,158...405,928 JBrowse link
G ECI2 enoyl-CoA delta isomerase 2 involved_in ISO (PMID:10419495) UniProt PMID:10419495 NCBI chr 6:3,948,748...3,968,634
Ensembl chr 6:4,137,353...4,157,538 		JBrowse link
G LEP leptin ISO RGD PMID:12058043 RGD:625499 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519 		JBrowse link
G LOC100983853 fatty-acid amide hydrolase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:12734197 GO_REF:0000107 RGD:1625736 NCBI chr 1:45,697,173...45,716,629
Ensembl chr 1:47,053,436...47,072,283 		JBrowse link
G LPIN1 lipin 1 involved_in ISO (MGI:3770090|PMID:16950137) UniProt PMID:16950137 MGI:3770090 NCBI chr2A:11,664,727...11,815,497
Ensembl chr2A:11,857,961...11,961,551 		JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase involved_in ISO (PMID:11561735) UniProt PMID:11561735 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 acts_upstream_of_or_within
involved_in		 ISO
IEA
ISS		 (MGI:2151301|PMID:11544478), (MGI:3050939|PMID:15262267) MGI
UniProt
InterPro
Ensembl		 PMID:11544478 PMID:15262267 GO_REF:0000002 GO_REF:0000024 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 MGI:2151301 MGI:3050939 NCBI chr 6:24,332,093...24,370,764
Ensembl chr 6:24,665,026...24,705,151 		JBrowse link
glucuronate catabolic process to xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:44,853,867...44,871,764
Ensembl chr 1:46,211,859...46,230,072 		JBrowse link
G CRYL1 crystallin lambda 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,729,724...1,852,031
Ensembl chr13:20,043,630...20,165,344 		JBrowse link
G DCXR dicarbonyl and L-xylulose reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:76,439,645...76,442,282
Ensembl chr17:82,145,224...82,147,257 		JBrowse link
G SORD sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:23,971,017...24,025,043 JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD1 glutamate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:58,100,623...58,145,045
Ensembl chr2B:175,558,538...175,602,944 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875), (PMID:6121377) BHF-UCL PMID:6121377 PMID:11032875 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GLUD2 glutamate dehydrogenase 2 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chr  X:110,223,978...111,065,243 JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:53641|PMID:4193185) RGD
Ensembl
MGI		 PMID:4193185 PMID:16489927 GO_REF:0000107 MGI:53641 RGD:13504861 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) RGD
MGI		 PMID:4193185 PMID:16489927 MGI:53641 RGD:13504861 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:53641|PMID:4193185) MGI
Ensembl		 PMID:4193185 GO_REF:0000107 MGI:53641 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378 		JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADHFE1 alcohol dehydrogenase iron containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:62,975,711...63,012,102
Ensembl chr 8:64,642,062...64,678,306 		JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD2 glutamate decarboxylase 2 ISO RGD PMID:8999827 RGD:1625237 NCBI chr10:26,392,877...26,481,859
Ensembl chr10:26,759,243...26,843,197 		JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLS glutaminase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3623875|PMID:16641247) MGI
Ensembl		 PMID:16641247 GO_REF:0000107 MGI:3623875 NCBI chr2B:78,182,117...78,267,071
Ensembl chr2B:196,098,910...196,183,323 		JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chr 4:67,491,407...67,533,822
Ensembl chr 4:74,059,966...74,102,002 		JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:49,344,590...49,350,383
Ensembl chr 3:50,589,193...50,594,968 		JBrowse link
G GLDC glycine decarboxylase involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:6,347,381...6,456,042
Ensembl chr 9:6,527,242...6,635,779 		JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMT aminomethyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,344,590...49,350,383
Ensembl chr 3:50,589,193...50,594,968 		JBrowse link
G GCSH glycine cleavage system protein H involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:6402507 GO_REF:0000002 GO_REF:0000104 RGD:1598699 NCBI chr16:61,688,959...61,702,364 JBrowse link
G GLDC glycine decarboxylase ISO RGD PMID:6778858 RGD:1642728 NCBI chr 9:6,347,381...6,456,042
Ensembl chr 9:6,527,242...6,635,779 		JBrowse link
G LOC100972512 glycine cleavage system H protein, mitochondrial involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 1:2,715,864...2,716,960 JBrowse link
G LOC100978633 glycine cleavage system H protein, mitochondrial-like involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 7:8,022,556...8,026,246 JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAO1 hydroxyacid oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:7,856,967...7,914,818
Ensembl chr20:7,633,861...7,695,120 		JBrowse link
glyoxylate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837 		JBrowse link
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,322,351...75,373,261
Ensembl chr 5:80,601,554...80,652,575 		JBrowse link
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:20797690) UniProt PMID:20797690 NCBI chr10:94,204,627...94,233,312 JBrowse link
histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAL histidine ammonia-lyase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:52899|PMID:8486363) MGI
Ensembl
InterPro		 PMID:8486363 GO_REF:0000002 GO_REF:0000107 MGI:52899 NCBI chr12:93,561,401...93,585,215
Ensembl chr12:96,950,020...96,973,662 		JBrowse link
G HDC histidine decarboxylase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2138019|PMID:11478947) MGI
Ensembl		 PMID:11478947 GO_REF:0000107 MGI:2138019 NCBI chr15:29,188,296...29,212,327
Ensembl chr15:47,510,629...47,534,577 		JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:123,530,644...123,569,337
Ensembl chr 3:130,846,775...130,882,119 		JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 NCBI chr12:93,534,881...93,557,762
Ensembl chr12:96,923,879...96,946,507 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr21:32,481,042...32,501,932
Ensembl chr21:45,734,825...45,753,400 		JBrowse link
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr12:93,561,401...93,585,215
Ensembl chr12:96,950,020...96,973,662 		JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:123,530,644...123,569,337
Ensembl chr 3:130,846,775...130,882,119 		JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr12:93,534,881...93,557,762
Ensembl chr12:96,923,879...96,946,507 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041 NCBI chr21:32,481,042...32,501,932
Ensembl chr21:45,734,825...45,753,400 		JBrowse link
G HAL histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr12:93,561,401...93,585,215
Ensembl chr12:96,950,020...96,973,662 		JBrowse link
G UROC1 urocanate hydratase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:123,530,644...123,569,337
Ensembl chr 3:130,846,775...130,882,119 		JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,195,868...8,228,071
Ensembl chr 5:8,017,403...8,049,322 		JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADSB acyl-CoA dehydrogenase short/branched chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:119,565,913...119,612,092
Ensembl chr10:123,839,570...123,886,759 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787 		JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:3770498|PMID:17767905) RGD
Ensembl
MGI		 PMID:11733007 PMID:17767905 GO_REF:0000107 MGI:3770498 RGD:1582175 NCBI chr19:45,793,433...45,809,546
Ensembl chr19:54,945,157...54,962,887 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr16:23,856,349...23,860,586
Ensembl chr16:31,476,917...31,483,639 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,645,849...45,649,039
Ensembl chr  X:53,754,164...53,757,643 		JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837 		JBrowse link
G GPT2 glutamic--pyruvic transaminase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr16:27,150,159...27,197,006
Ensembl chr16:46,040,439...46,086,840 		JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,322,351...75,373,261
Ensembl chr 5:80,601,554...80,652,575 		JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837 		JBrowse link
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932 		JBrowse link
G CDO1 cysteine dioxygenase type 1 ISO RGD PMID:16611641 RGD:2301357 NCBI chr 5:111,159,041...111,170,965
Ensembl chr 5:116,955,295...116,967,506 		JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr12:35,572,064...35,598,077
Ensembl chr12:36,354,437...36,379,738 		JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr12:35,572,064...35,598,077
Ensembl chr12:36,354,437...36,379,738 		JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYAT3 kynurenine aminotransferase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:91,636,681...91,708,859
Ensembl chr 1:90,403,072...90,460,426 		JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000041 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350812|PMID:10567240) MGI
Ensembl		 PMID:10567240 GO_REF:0000107 MGI:1350812 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:27,717,083...27,820,776
Ensembl chr17:28,225,831...28,240,210 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:55,433,358...55,455,876
Ensembl chr14:74,278,128...74,300,133 		JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 NCBI chr15:59,121,657...59,155,229
Ensembl chr15:78,048,571...78,115,098 		JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr14:57,874,184...57,901,397
Ensembl chr14:77,075,814...77,086,530 		JBrowse link
G HGD homogentisate 1,2-dioxygenase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chr 3:117,735,772...117,790,096
Ensembl chr 3:124,646,431...124,700,733 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389 		JBrowse link
G PAH phenylalanine hydroxylase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr12:100,417,267...100,496,888
Ensembl chr12:103,811,761...103,891,726 		JBrowse link
G QDPR quinoid dihydropteridine reductase ISO RGD PMID:4155291 RGD:5128604 NCBI chr 4:11,906,439...11,932,311
Ensembl chr 4:17,199,772...17,225,667 		JBrowse link
G TAT tyrosine aminotransferase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886 		JBrowse link
G ZFAND6 zinc finger AN1-type containing 6 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 NCBI chr15:59,023,678...59,107,270
Ensembl chr15:78,048,571...78,115,098 		JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932 		JBrowse link
G SDS serine dehydratase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:110,995,164...111,006,668
Ensembl chr12:114,377,650...114,388,839 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220 		JBrowse link
lactate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHD lactate dehydrogenase D involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:55,680,683...55,685,596
Ensembl chr16:75,032,078...75,037,012 		JBrowse link
leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr16:23,856,349...23,860,586
Ensembl chr16:31,476,917...31,483,639 		JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr15:19,342,283...19,372,465
Ensembl chr15:37,596,688...37,609,902 		JBrowse link
G MCCC2 methylcrotonyl-CoA carboxylase subunit 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:43,650,993...43,724,877
Ensembl chr 5:44,298,650...44,369,106 		JBrowse link
leukotriene B4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP4A11 cytochrome P450 family 4 subfamily A member 11 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:46,228,434...46,240,736
Ensembl chr 1:47,583,564...47,594,870 		JBrowse link
G CYP4F2 cytochrome P450 family 4 subfamily F member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:15,367,328...15,388,139
Ensembl chr19:16,349,577...16,368,520 		JBrowse link
G CYP4F3 cytochrome P450 family 4 subfamily F member 3 involved_in ISO (PMID:11461919), (PMID:9675028) UniProt PMID:9675028 PMID:11461919 NCBI chr19:15,162,886...15,182,334
Ensembl chr19:16,146,664...16,165,869 		JBrowse link
leukotriene D4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPEP1 dipeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:70,365,900...70,392,377
Ensembl chr16:89,975,105...89,997,978 		JBrowse link
G DPEP2 dipeptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:48,328,281...48,341,510
Ensembl chr16:67,715,805...67,729,164 		JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO
IEA		 RGD
InterPro		 PMID:3968063 GO_REF:0000002 RGD:2317678 NCBI chr2B:97,445,421...97,483,514
Ensembl chr2B:215,847,775...215,885,524 		JBrowse link
G ADTRP androgen dependent TFPI regulating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,550,584...11,648,755
Ensembl chr 6:11,829,782...11,895,656 		JBrowse link
G AIG1 androgen induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:140,828,806...141,116,373
Ensembl chr 6:145,553,306...145,837,049 		JBrowse link
G GLYATL2 glycine-N-acyltransferase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,088,095...54,159,915
Ensembl chr11:57,547,623...57,553,178 		JBrowse link
G LIPE lipase E, hormone sensitive type acts_upstream_of_or_within ISO (MGI:3654969|PMID:16804080) MGI PMID:16804080 MGI:3654969 NCBI chr19:39,289,162...39,315,067
Ensembl chr19:47,881,292...47,907,066 		JBrowse link
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346 		JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSF3 acyl-CoA synthetase family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,842,709...69,907,075
Ensembl chr16:89,467,997...89,523,825 		JBrowse link
medium-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADM acyl-CoA dehydrogenase medium chain involved_in ISO
IEA		 RGD
Ensembl		 PMID:3968063 GO_REF:0000107 RGD:2317678 NCBI chr 1:74,939,477...74,978,815
Ensembl chr 1:76,911,763...76,950,840 		JBrowse link
G GLYATL2 glycine-N-acyltransferase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,088,095...54,159,915
Ensembl chr11:57,547,623...57,553,178 		JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAT1A methionine adenosyltransferase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:76,677,815...76,697,512
Ensembl chr10:80,280,063...80,298,291 		JBrowse link
monounsaturated fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLYATL2 glycine-N-acyltransferase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,088,095...54,159,915
Ensembl chr11:57,547,623...57,553,178 		JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr16:1,376,904...1,387,883
Ensembl chr16:2,619,320...2,630,375 		JBrowse link
G NPL N-acetylneuraminate pyruvate lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:158,305,203...158,346,531
Ensembl chr 1:161,958,896...161,997,222 		JBrowse link
G RENBP renin binding protein involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:143,490,103...143,499,487
Ensembl chr  X:153,376,847...153,386,214 		JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:179,231,712...179,348,759
Ensembl chr 1:183,580,773...183,639,882 		JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACB acetyl-CoA carboxylase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:106,692,668...106,845,490
Ensembl chr12:110,086,374...110,239,847 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G CNR1 cannabinoid receptor 1 ISO RGD PMID:19724020 RGD:2314644 NCBI chr 6:86,017,141...86,044,889 JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:11485163 RGD:2316274 NCBI chr2B:6,309,048...6,314,660
Ensembl chr2B:119,887,728...119,892,986 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5474727|PMID:23209793) ARUK-UCL
Ensembl		 PMID:23209793 GO_REF:0000107 MGI:5474727 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438 		JBrowse link
G PINK1 PTEN induced kinase 1 ISO RGD PMID:25421206 RGD:11560775 NCBI chr 1:19,583,330...19,601,248
Ensembl chr 1:20,627,693...20,645,560 		JBrowse link
G PLIN5 perilipin 5 involved_in ISO (MGI:5559662|PMID:22675471), (MGI:5559666|PMID:21885430)
(MGI:5440401|PMID:22532565)		 UniProt PMID:21885430 PMID:22532565 PMID:22675471 MGI:5440401 MGI:5559662 MGI:5559666 NCBI chr19:3,542,675...3,555,611 JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETFBKMT electron transfer flavoprotein subunit beta lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:54,570,372...54,586,751
Ensembl chr12:57,161,781...57,172,705 		JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTC ornithine transcarbamylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819 		JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON3 paraoxonase 3 ISO RGD PMID:12946270 RGD:1303961 NCBI chr 7:87,314,788...87,354,020
Ensembl chr 7:100,902,432...100,941,611 		JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424 		JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:49,082,122...49,158,524
Ensembl chr12:49,941,914...50,011,140 		JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chr10:108,965,559...109,019,240
Ensembl chr10:112,407,161...112,457,892 		JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,275,799...37,331,971
Ensembl chr19:45,791,800...45,840,271 		JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO RGD PMID:19302064 RGD:2311346 NCBI chr11:63,841,028...63,928,242
Ensembl chr11:67,144,736...67,205,481 		JBrowse link
G FABP1 fatty acid binding protein 1 ISO peroxisomal RGD PMID:16262600 RGD:1626442 NCBI chr2A:87,256,032...87,303,505
Ensembl chr2A:89,165,315...89,170,448 		JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:113,973,191...114,041,127
Ensembl chr2B:232,849,239...232,852,967 		JBrowse link
G IRS2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chr13:90,886,095...90,917,724 JBrowse link
G MTLN mitoregulin involved_in ISO (MGI:6278482|PMID:29949755) UniProt PMID:29949755 MGI:6278482 NCBI chr2A:91,481,706...91,514,106
Ensembl chr2A:111,713,514...111,713,933 		JBrowse link
G PLIN5 perilipin 5 involved_in ISO PMID:22127648
(MGI:3709110|PMID:17130488)		 UniProt PMID:17130488 PMID:22127648 MGI:3709110 RGD:8553692 NCBI chr19:3,542,675...3,555,611 JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20007935) BHF-UCL PMID:20007935 NCBI chr 7:19,761,041...19,765,665 JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in ISO (PMID:16616139) UniProt PMID:16616139 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065 		JBrowse link
G PRODH2 proline dehydrogenase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:32,713,686...32,726,964
Ensembl chr19:41,462,735...41,476,308 		JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chr 1:17,829,723...17,861,008
Ensembl chr 1:18,878,421...18,909,615 		JBrowse link
pyruvate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDHA lactate dehydrogenase A involved_in ISO (MGI:4848244|PMID:21041631)
(MGI:62497|PMID:8224816)		 MGI PMID:8224816 PMID:21041631 MGI:4848244 MGI:62497 NCBI chr11:18,432,347...18,445,694
Ensembl chr11:18,115,250...18,128,400 		JBrowse link
G LDHC lactate dehydrogenase C involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:18,450,117...18,489,321
Ensembl chr11:18,132,829...18,172,055 		JBrowse link
G SLC16A1 solute carrier family 16 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,555,561...115,600,302
Ensembl chr 1:124,755,250...124,800,032 		JBrowse link
G SLC16A3 solute carrier family 16 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:76,638,030...76,649,159
Ensembl chr17:82,458,737...82,461,721 		JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAZ MYC associated zinc finger protein involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,049,806...30,070,469 JBrowse link
G QPRT quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within		 ISO (PMID:24038671), (PMID:3409840), (PMID:9473669)
(PMID:9473669)		 UniProt
MGI		 PMID:3409840 PMID:9473669 PMID:24038671
regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB11 ATP binding cassette subfamily B member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:56,199,434...56,311,773
Ensembl chr2B:173,664,518...173,776,379 		JBrowse link
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424 		JBrowse link
G LONP2 lon peptidase 2, peroxisomal involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:28,513,060...28,628,181
Ensembl chr16:47,405,018...47,511,124 		JBrowse link
G MLYCD malonyl-CoA decarboxylase ISO RGD PMID:10516138 RGD:1600797 NCBI chr16:64,520,860...64,537,955
Ensembl chr16:83,912,793...83,929,162 		JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841 		JBrowse link
G TYSND1 trypsin like peroxisomal matrix peptidase 1 involved_in ISO (PMID:22002062) UniProt PMID:22002062 NCBI chr10:66,609,736...66,619,838
Ensembl chr10:69,141,724...69,148,346 		JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:89,817,623...89,822,024
Ensembl chr10:93,330,460...93,334,105 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:21138835 GO_REF:0000107 RGD:6771354 NCBI chr2A:72,172,658...72,191,410
Ensembl chr2A:73,670,830...73,686,433 		JBrowse link
G CYP26C1 cytochrome P450 family 26 subfamily C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:89,804,830...89,813,687
Ensembl chr10:93,317,798...93,325,315 		JBrowse link
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 involved_in ISO (PMID:26936974) UniProt PMID:26936974 NCBI chr 7:1,140,855...1,147,788
Ensembl chr 7:1,353,510...1,362,781 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase acts_upstream_of_or_within ISO (MGI:2183618|PMID:12023972) RGD
MGI		 PMID:11741948 PMID:12023972 MGI:2183618 RGD:730275 NCBI chr20:30,603,701...30,626,835
Ensembl chr20:31,738,007...31,760,803 		JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCLY selenocysteine lyase involved_in ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr2B:125,276,540...125,331,057
Ensembl chr2B:244,144,105...244,181,767 		JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:87,303,022...87,319,494
Ensembl chr2A:89,212,442...89,228,446 		JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCAT glycine C-acetyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr22:18,722,886...18,731,963
Ensembl chr22:36,554,067...36,563,429 		JBrowse link
G LOC100990410 L-threonine 3-dehydrogenase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:7,837,080...7,855,179 JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACMSD aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chr2B:24,958,661...25,019,901
Ensembl chr2B:138,918,281...138,978,407 		JBrowse link
G AFMID arylformamidase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr17:72,265,365...72,285,764
Ensembl chr17:77,816,908...77,835,905 		JBrowse link
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr2A:42,857,216...42,882,738
Ensembl chr2A:43,704,468...43,729,887 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:39,108,310...39,123,611
Ensembl chr 8:36,617,312...36,632,352 		JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:39,149,045...39,209,671
Ensembl chr 8:36,665,240...36,717,420 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389 		JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 1:217,094,037...217,157,827
Ensembl chr 1:222,075,268...222,138,866 		JBrowse link
G KYNU kynureninase involved_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 GO_REF:0000117 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266 		JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266 		JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389 		JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3587527|PMID:15866519) MGI
UniProt
InterPro		 PMID:15866519 GO_REF:0000002 GO_REF:0000041 MGI:3587527 NCBI chr17:72,265,365...72,285,764
Ensembl chr17:77,816,908...77,835,905 		JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753) RGD
InterPro
Ensembl
MGI		 PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 GO_REF:0000002 GO_REF:0000107 MGI:2151782 MGI:2156954 RGD:2290190 RGD:2290543 NCBI chr 8:39,108,310...39,123,611
Ensembl chr 8:36,617,312...36,632,352 		JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3719924|PMID:17671174)
(MGI:3712725|PMID:17499941)		 MGI
InterPro
Ensembl		 PMID:17499941 PMID:17671174 GO_REF:0000002 GO_REF:0000107 MGI:3712725 MGI:3719924 NCBI chr 8:39,149,045...39,209,671
Ensembl chr 8:36,665,240...36,717,420 		JBrowse link
G TDO2 tryptophan 2,3-dioxygenase involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266 		JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAH fumarylacetoacetate hydrolase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr15:59,121,657...59,155,229
Ensembl chr15:78,048,571...78,115,098 		JBrowse link
G GSTZ1 glutathione S-transferase zeta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:57,874,184...57,901,397
Ensembl chr14:77,075,814...77,086,530 		JBrowse link
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in
acts_upstream_of_or_within		 ISO PMID:8814303
(PMID:31537781)		 UniProt
MGI		 PMID:8814303 PMID:31537781 RGD:8554707 NCBI chr12:119,442,893...119,462,171
Ensembl chr12:122,813,141...122,831,701 		JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,902,656...46,942,213
Ensembl chr19:55,819,080...55,858,389 		JBrowse link
G TAT tyrosine aminotransferase involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886 		JBrowse link
G ZFAND6 zinc finger AN1-type containing 6 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr15:59,023,678...59,107,270
Ensembl chr15:78,048,571...78,115,098 		JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:2768248 GO_REF:0000107 RGD:1599052 NCBI chr14:54,616,531...54,643,346
Ensembl chr14:73,472,255...73,495,734 		JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chr16:23,856,349...23,860,586
Ensembl chr16:31,476,917...31,483,639 		JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chr 7:28,166,127...28,299,845
Ensembl chr 7:27,763,021...27,896,598 		JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr2B:77,510,938...77,652,911 JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX1 acyl-CoA oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:69,890,817...69,928,342
Ensembl chr17:75,445,923...75,479,571 		JBrowse link
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424 		JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:49,082,122...49,158,524
Ensembl chr12:49,941,914...50,011,140 		JBrowse link
G ABCD3 ATP binding cassette subfamily D member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:97,079,326...97,179,886
Ensembl chr 1:95,808,027...95,907,864 		JBrowse link
G ACOT2 acyl-CoA thioesterase 2 ISO RGD PMID:7744868 RGD:2315867 NCBI chr14:54,128,445...54,135,067 JBrowse link
G SLC27A2 solute carrier family 27 member 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2662022|PMID:12719378) MGI
Ensembl		 PMID:12719378 GO_REF:0000107 MGI:2662022 NCBI chr15:29,130,262...29,182,752
Ensembl chr15:47,452,227...47,505,066 		JBrowse link
G SLC27A4 solute carrier family 27 member 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3719310|PMID:17522045) MGI
Ensembl		 PMID:17522045 GO_REF:0000107 MGI:3719310 NCBI chr 9:99,463,338...99,483,802
Ensembl chr 9:128,133,365...128,151,077 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15348
    metabolic process 9986
      cellular metabolic process 7792
        organic acid metabolic process 850
          organic acid catabolic process 207
            carboxylic acid catabolic process 207
              L-ascorbic acid catabolic process 0
              N-acetylmuramic acid catabolic process 0
              N-acetylneuraminate catabolic process 3
              achromobactin catabolic process 0
              alginic acid catabolic process 0
              alpha-amino acid catabolic process + 74
              amino acid catabolic process + 89
              aromatic amino acid family catabolic process + 17
              arsonoacetate catabolic process 0
              cephalosporin C catabolic process 0
              chrysobactin catabolic process 0
              cspyrone B1 catabolic process 0
              dicarboxylic acid catabolic process + 16
              endocrocin catabolic process 0
              fumonisin catabolic process 0
              gerfelin catabolic process 0
              gibberellin catabolic process 0
              helvolic acid catabolic process 0
              leukotriene catabolic process + 5
              monensin A catabolic process 0
              monocarboxylic acid catabolic process + 111
              monodictyphenone catabolic process 0
              phthalate catabolic process 0
              pyochelin catabolic process 0
              sulfur amino acid catabolic process + 6
              tensidol B catabolic process 0
              tricarboxylic acid catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 15348
    metabolic process 9986
      small molecule metabolic process 1571
        organic acid metabolic process 850
          oxoacid metabolic process 844
            carboxylic acid metabolic process 827
              carboxylic acid catabolic process 207
                L-ascorbic acid catabolic process 0
                N-acetylmuramic acid catabolic process 0
                N-acetylneuraminate catabolic process 3
                achromobactin catabolic process 0
                alginic acid catabolic process 0
                alpha-amino acid catabolic process + 74
                amino acid catabolic process + 89
                aromatic amino acid family catabolic process + 17
                arsonoacetate catabolic process 0
                cephalosporin C catabolic process 0
                chrysobactin catabolic process 0
                cspyrone B1 catabolic process 0
                dicarboxylic acid catabolic process + 16
                endocrocin catabolic process 0
                fumonisin catabolic process 0
                gerfelin catabolic process 0
                gibberellin catabolic process 0
                helvolic acid catabolic process 0
                leukotriene catabolic process + 5
                monensin A catabolic process 0
                monocarboxylic acid catabolic process + 111
                monodictyphenone catabolic process 0
                phthalate catabolic process 0
                pyochelin catabolic process 0
                sulfur amino acid catabolic process + 6
                tensidol B catabolic process 0
                tricarboxylic acid catabolic process + 0
paths to the root