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ONTOLOGY REPORT - ANNOTATIONS

Term:deoxyribose phosphate catabolic process
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Accession:GO:0046386 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.
Synonyms:exact_synonym: deoxyribose phosphate breakdown;   deoxyribose phosphate catabolism;   deoxyribose phosphate degradation

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deoxyribose phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IEA UniProt GO_REF:0000041 NCBI chr11:15,819,678...15,947,137
Ensembl chr11:15,819,708...15,947,159 		JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in ISO (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:20,176,500...20,184,637 JBrowse link
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 8:20,176,422...20,178,959 JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in ISO (PMID:10720488) MGI PMID:10720488 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G LOC103224536 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:48,956,328...48,989,641 JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:93,261,913...93,278,063
Ensembl chr20:93,264,543...93,277,688 		JBrowse link
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:20,992,892...21,001,400
Ensembl chr29:20,993,280...21,001,606 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr 3:7,092,926...7,109,949 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:76,084,693...76,162,840
Ensembl chr14:76,085,368...76,163,936 		JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within ISO (PMID:7592575)
(PMID:14607964), (PMID:9478961)
(PMID:7670465)
(PMID:7731963)		 MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,641,634...57,699,685
Ensembl chr 2:57,639,046...57,699,525 		JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:35,376,738...36,215,388
Ensembl chr20:35,377,266...36,215,679 		JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:99,216,623...99,303,969
Ensembl chr 8:99,216,354...99,303,282 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:46,531,820...46,533,763
Ensembl chr16:46,532,216...46,535,736 		JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:7,605,999...7,639,339
Ensembl chr19:7,605,537...7,639,017 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:10,686,600...10,707,181
Ensembl chr21:10,686,093...10,706,347 		JBrowse link
G UPP2 uridine phosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:43,510,752...43,545,133 JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:27,096,489...27,102,778
Ensembl chr 5:27,096,212...27,102,835 		JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in ISO (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:20,176,500...20,184,637 JBrowse link
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 8:20,176,422...20,178,959 JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO PMID:17234634 MGI PMID:17234634 RGD:8553712 NCBI chr17:28,923,202...28,927,227 JBrowse link
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:83,195,746...83,305,181
Ensembl chr12:83,195,994...83,306,792 		JBrowse link
G LOC103224536 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:48,956,328...48,989,641 JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:46,531,820...46,533,763
Ensembl chr16:46,532,216...46,535,736 		JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:93,261,913...93,278,063
Ensembl chr20:93,264,543...93,277,688 		JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:5560407) MGI PMID:5560407 NCBI chr 9:96,133,873...96,325,122
Ensembl chr 9:96,135,400...96,219,956 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr 3:7,092,926...7,109,949 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:76,084,693...76,162,840
Ensembl chr14:76,085,368...76,163,936 		JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:25,966,148...25,974,143
Ensembl chr 3:25,966,876...25,973,647 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:57,641,634...57,699,685
Ensembl chr 2:57,639,046...57,699,525 		JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 acts_upstream_of_or_within ISO (PMID:20081199) MGI PMID:20081199 NCBI chr15:58,847,418...58,849,133
Ensembl chr15:58,847,560...58,849,246 		JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:46,531,820...46,533,763
Ensembl chr16:46,532,216...46,535,736 		JBrowse link
G TYMP thymidine phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,997,337...33,001,558
Ensembl chr19:32,997,304...33,001,215 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in
NOT|involved_in		 IEA
ISO		 (PMID:15772079) Ensembl
UniProt		 PMID:15772079 GO_REF:0000107 NCBI chr21:10,686,600...10,707,181
Ensembl chr21:10,686,093...10,706,347 		JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chr 5:27,096,489...27,102,778
Ensembl chr 5:27,096,212...27,102,835 		JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:35,376,738...36,215,388
Ensembl chr20:35,377,266...36,215,679 		JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:99,216,623...99,303,969
Ensembl chr 8:99,216,354...99,303,282 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:46,531,820...46,533,763
Ensembl chr16:46,532,216...46,535,736 		JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12234672) Ensembl
MGI		 PMID:12234672 GO_REF:0000107 NCBI chr16:16,348,151...16,385,203
Ensembl chr16:16,348,346...16,384,490 		JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:7,605,999...7,639,339
Ensembl chr19:7,605,537...7,639,017 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:10,686,600...10,707,181
Ensembl chr21:10,686,093...10,706,347 		JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase involved_in ISO
IEA		 RGD
TreeGrafter
InterPro
UniProt		 PMID:1315924 PMID:3032103 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 RGD:2300191 RGD:2301218 NCBI chr26:34,941,775...34,954,184
Ensembl chr26:34,940,702...34,953,166 		JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:46,531,820...46,533,763
Ensembl chr16:46,532,216...46,535,736 		JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:16,348,151...16,385,203
Ensembl chr16:16,348,346...16,384,490 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17043
    cellular process 16562
      metabolic process 10934
        catabolic process 2542
          organophosphate catabolic process 251
            deoxyribose phosphate catabolic process 25
              2-deoxyribose 1-phosphate catabolic process 0
              purine deoxyribonucleotide catabolic process + 15
              pyrimidine deoxyribonucleotide catabolic process + 10
Path 2
Term Annotations click to browse term
  biological_process 17043
    cellular process 16562
      metabolic process 10934
        phosphorus metabolic process 2292
          phosphate-containing compound metabolic process 2288
            deoxyribose phosphate metabolic process 44
              deoxyribose phosphate catabolic process 25
                2-deoxyribose 1-phosphate catabolic process 0
                purine deoxyribonucleotide catabolic process + 15
                pyrimidine deoxyribonucleotide catabolic process + 10
paths to the root