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ONTOLOGY REPORT - ANNOTATIONS


Term:amino sugar biosynthetic process
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Accession:GO:0046349 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any amino sugar, sugars containing an amino group in place of a hydroxyl group.
Synonyms:exact_synonym: amino sugar anabolism;   amino sugar biosynthesis;   amino sugar formation;   amino sugar synthesis;   aminosaccharide biosynthesis;   aminosaccharide biosynthetic process


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glucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IDA RGD PMID:10898949 RGD:1625426 NCBI chr 4:118,852,046...118,901,583
Ensembl chr 4:118,852,062...118,901,591
JBrowse link
N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:59,511,738...59,553,421
Ensembl chr 5:59,512,872...59,553,416
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:146,800,018...146,812,988
Ensembl chr 3:146,800,019...146,812,989
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase TAS RGD PMID:15330759 RGD:1358725 NCBI chr 5:59,511,738...59,553,421
Ensembl chr 5:59,512,872...59,553,416
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase IDA
ISO
PMID:16237198
(PMID:16237198)
RGD PMID:16237198, PMID:16237198 RGD:8554804 NCBI chr 3:146,800,018...146,812,988
Ensembl chr 3:146,800,019...146,812,989
JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:118,852,046...118,901,583
Ensembl chr 4:118,852,062...118,901,591
JBrowse link
G Gfpt2 glutamine-fructose-6-phosphate transaminase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:35,279,237...35,325,506
Ensembl chr10:35,279,236...35,325,508
JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:31,479,117...31,489,154
Ensembl chr18:31,479,117...31,487,671
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:62,628,102...62,646,158
Ensembl chr14:62,628,111...62,646,110
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr15:19,721,292...19,734,032
Ensembl chr15:19,721,293...19,733,967
JBrowse link
G Pgm3 phosphoglucomutase 3 IEA
IBA
ISO
GO_REF:0000041
PMID:21873635
MGI:3758645 (MGI:3723540|PMID:17548465)
(PMID:24589341)
UniProt
RGD
PMID:17548465, PMID:24589341, PMID:21873635 GO_REF:0000041, MGI:3723540, RGD:13792537 NCBI chr 8:94,225,513...94,243,230
Ensembl chr 8:94,225,515...94,243,215
JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:88,463,532...88,497,901
Ensembl chr13:88,463,532...88,497,901
JBrowse link
G Uap1l1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:2,579,250...2,584,523
Ensembl chr 3:2,579,258...2,584,523
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      organic substance metabolic process 11552
        carbohydrate derivative metabolic process 1036
          amino sugar metabolic process 40
            amino sugar biosynthetic process 10
              N-acetylneuraminate biosynthetic process 2
              O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
              UDP-4-deoxy-4-formamido-beta-L-arabinopyranose biosynthetic process 0
              UDP-N-acetylgalactosamine biosynthetic process 0
              UDP-N-acetylglucosamine biosynthetic process + 8
              fructosamine biosynthetic process + 0
              glucosamine-containing compound biosynthetic process + 3
              mannosamine biosynthetic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.