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ONTOLOGY REPORT - ANNOTATIONS


Term:amino sugar biosynthetic process
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Accession:GO:0046349 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any amino sugar, sugars containing an amino group in place of a hydroxyl group.
Synonyms:exact_synonym: amino sugar anabolism;   amino sugar biosynthesis;   amino sugar formation;   amino sugar synthesis;   aminosaccharide biosynthesis;   aminosaccharide biosynthetic process



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glucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IDA RGD PMID:10898949 RGD:1625426 NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:119,496,714...119,546,471
JBrowse link
N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:58,267,189...58,307,396
Ensembl chr 5:58,267,210...58,307,499
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:139,826,549...139,841,655
Ensembl chr 3:139,826,549...139,841,648
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase TAS RGD PMID:15330759 RGD:1358725 NCBI chr 5:58,267,189...58,307,396
Ensembl chr 5:58,267,210...58,307,499
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in ISO
IDA
(PMID:16237198) RGD PMID:16237198 PMID:16237198 RGD:8554804 NCBI chr 3:139,826,549...139,841,655
Ensembl chr 3:139,826,549...139,841,648
JBrowse link
UDP-N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:119,496,714...119,546,471
JBrowse link
G Gfpt2 glutamine-fructose-6-phosphate transaminase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:34,115,005...34,161,329
Ensembl chr10:34,115,052...34,161,329
JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:30,165,435...30,177,462
Ensembl chr18:30,165,427...30,177,486
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:38,520,663...38,538,713
Ensembl chr14:38,520,705...38,538,713
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 involved_in IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr15:18,596,180...18,608,854
Ensembl chr15:18,596,442...18,608,739
JBrowse link
G Pgm3 phosphoglucomutase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:3758645 (MGI:3723540|PMID:17548465)
GO_REF:0000041
(PMID:24589341)
RGD
UniProt
PMID:17548465 PMID:24589341 PMID:21873635 GO_REF:0000041 MGI:3723540, RGD:13792537 NCBI chr 8:87,517,931...87,536,034
Ensembl chr 8:87,517,701...87,536,022
JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:82,342,946...82,377,558
Ensembl chr13:82,342,946...82,377,469
JBrowse link
G Uap1l1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:8,172,335...8,180,505
Ensembl chr 3:8,173,216...8,180,443
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    metabolic process 11791
      organic substance metabolic process 11326
        carbohydrate derivative metabolic process 1021
          amino sugar metabolic process 41
            amino sugar biosynthetic process 10
              N-acetylneuraminate biosynthetic process 2
              O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
              UDP-4-deoxy-4-formamido-beta-L-arabinopyranose biosynthetic process 0
              UDP-N-acetylgalactosamine biosynthetic process 0
              UDP-N-acetylglucosamine biosynthetic process + 8
              fructosamine biosynthetic process + 0
              glucosamine-containing compound biosynthetic process + 3
              mannosamine biosynthetic process + 0
paths to the root