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ONTOLOGY REPORT - ANNOTATIONS


Term:formaldehyde metabolic process
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Accession:GO:0046292 term browser browse the term
Definition:The chemical reactions and pathways involving formaldehyde (methanal, H2C=O), a colorless liquid or gas with a pungent odor, commonly used as a fixative or an antibacterial agent.
Synonyms:exact_synonym: formaldehyde metabolism;   methanal metabolic process;   methanal metabolism


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formaldehyde metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 IDA RGD PMID:1453005 RGD:1357171 NCBI chr10:47,525,486...47,546,535
Ensembl chr10:47,525,493...47,546,345
JBrowse link
formaldehyde biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm3a lysine demethylase 3A involved_in IEA
ISO
GO_REF:0000107
(PMID:16603237)
Ensembl
RGD
PMID:16603237 GO_REF:0000107 NCBI chr 4:99,503,160...99,547,315
Ensembl chr 4:99,503,176...99,546,905
JBrowse link
formaldehyde catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07062298.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:167,564,259...167,568,807 JBrowse link
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:243,702,035...243,720,063
Ensembl chr 2:243,700,784...243,740,899
JBrowse link
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2180100 (MGI:1338643|PMID:10358022)
RGD PMID:10358022, PMID:21873635 MGI:1338643, RGD:13792537 NCBI chr 2:243,728,500...243,740,907
Ensembl chr 2:243,700,784...243,740,899
JBrowse link
G Esd esterase D involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:56,756,848...56,776,348
Ensembl chr15:56,756,661...56,776,348
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    metabolic process 11894
      small molecule metabolic process 1786
        formaldehyde metabolic process 6
          formaldehyde assimilation + 0
          formaldehyde biosynthetic process 1
          formaldehyde catabolic process 4
Path 2
Term Annotations click to browse term
  biological_process 19638
    metabolic process 11894
      cellular metabolic process 10847
        cellular aldehyde metabolic process 64
          formaldehyde metabolic process 6
            formaldehyde assimilation + 0
            formaldehyde biosynthetic process 1
            formaldehyde catabolic process 4
paths to the root