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ONTOLOGY REPORT - ANNOTATIONS

Term:polyol biosynthetic process
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Accession:GO:0046173 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.
Synonyms:exact_synonym: polyhydric alcohol biosynthetic process;   polyol anabolism;   polyol biosynthesis;   polyol formation;   polyol synthesis


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calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:179,694,647...179,709,083
Ensembl chr 3:159,275,947...159,290,383 		JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in ISO
IEA
IBA		 (PMID:15465040)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:15465040 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:83,712,402...83,743,222
Ensembl chr 9:76,264,860...76,294,551 		JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA
IBA		 (PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
GO_REF:0000107
(PMID:15972816)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 7:64,756,626...64,761,570
Ensembl chr 7:62,871,297...62,876,241 		JBrowse link
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 involved_in ISO
IEA		 (PMID:15465040), (PMID:18511070)
GO_REF:0000107		 RGD
Ensembl		 PMID:15465040 PMID:18511070 GO_REF:0000107 NCBI chr 1:178,166,984...178,232,191
Ensembl chr 1:168,751,038...168,797,759 		JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:14,321,771...14,343,886
Ensembl chr12:9,015,383...9,285,008 		JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 IDA RGD PMID:2507189 RGD:11252156 NCBI chr13:95,246,079...95,275,852
Ensembl chr13:92,714,315...92,790,235 		JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO		 PMID:17545671
GO_REF:0000107
(PMID:17545671)		 Ensembl
RGD		 PMID:17545671 PMID:17545671 GO_REF:0000107, RGD:8553472 NCBI chr 1:252,306,541...252,337,622
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Lep leptin IDA RGD PMID:21068181 RGD:5128556 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO
IEA
IDA		 (PMID:26755581)
GO_REF:0000107		 RGD
Ensembl		 PMID:26755581 PMID:26755581 GO_REF:0000107, RGD:10679995 NCBI chr10:13,999,782...14,002,408
Ensembl chr10:13,494,291...13,497,858 		JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 PMID:4186849
GO_REF:0000107
MGI:2182390 (PMID:11792850)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:11792850 PMID:4186849 GO_REF:0000033 GO_REF:0000107, RGD:8553288 NCBI chr 3:182,348,572...182,354,521
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:32,997,853...33,006,691
Ensembl chr15:29,027,894...29,037,283 		JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:91,462,781...91,484,057
Ensembl chr 2:91,462,799...91,484,313 		JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:63,104,113...63,135,232
Ensembl chr18:60,834,246...60,865,641 		JBrowse link
G Isyna1 inositol-3-phosphate synthase 1 involved_in IEA
IBA
IDA
ISO		 GO_REF:0000041
GO_REF:0000002
GO_REF:0000043
GO_REF:0000033
PMID:6773943
PMID:885873
PMID:23504145
PMID:19188364
UniProtKB:P11986 (PMID:23902760)		 UniProt
InterPro
GO_Central
RGD		 PMID:23902760 PMID:6773943 PMID:885873 PMID:23504145 PMID:19188364 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043, RGD:153298956, RGD:153298936, RGD:153298945, RGD:153298950 NCBI chr16:18,873,119...18,876,116
Ensembl chr16:18,839,145...18,841,979 		JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:117,594,177...117,613,266 JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in IEA
IBA
ISO		 GO_REF:0000002
GO_REF:0000033
MGI:5635272 (PMID:24657168)
GO_REF:0000107		 InterPro
GO_Central
RGD
Ensembl		 PMID:24657168 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:118,362,154...118,388,668
Ensembl chr 8:109,484,310...109,510,166 		JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:11502751)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:11502751 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr20:5,223,863...5,245,443
Ensembl chr20:5,224,120...5,245,428 		JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000002
GO_REF:0000033
MGI:3583918 (PMID:15939867)		 InterPro
GO_Central
RGD		 PMID:15939867 GO_REF:0000002 GO_REF:0000033 NCBI chr20:17,216,151...17,250,826
Ensembl chr20:17,218,037...17,251,705 		JBrowse link
G Ippk inositol-pentakisphosphate 2-kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:15,190,191...15,235,203
Ensembl chr17:15,190,265...15,229,541 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:127,179,841...127,188,405
Ensembl chr 3:106,726,036...106,734,600 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr13:94,601,072...94,696,180
Ensembl chr13:92,069,216...92,162,004 		JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:82,500,957...82,522,533
Ensembl chr 1:82,500,957...82,522,779 		JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:108,284,120...108,327,683
Ensembl chr 3:108,284,120...108,323,428 		JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:98,315,220...98,394,537
Ensembl chr 9:98,315,252...98,390,814 		JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C, gamma 1 IMP RGD PMID:16973916 RGD:2299886 NCBI chr 3:169,805,299...169,836,040
Ensembl chr 3:149,385,587...149,416,330 		JBrowse link
G Plcg2 phospholipase C, gamma 2 acts_upstream_of_or_within ISO (PMID:9013981) RGD PMID:9013981 NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of ISO MGI:1856024|MGI:1856025 (PMID:11371619) RGD PMID:11371619 NCBI chr11:16,763,312...16,781,295
Ensembl chr11:3,317,058...3,334,801 		JBrowse link
G Ptafr platelet-activating factor receptor acts_upstream_of_or_within ISO (PMID:9013981) RGD PMID:9013981 NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:144,765,976...144,795,251 		JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) RGD PMID:12641450 NCBI chr 5:128,035,714...128,110,015
Ensembl chr 5:122,776,549...122,881,287 		JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in IDA PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chr16:18,873,119...18,876,116
Ensembl chr16:18,839,145...18,841,979 		JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in ISO
IEA		 (PMID:7782310)
GO_REF:0000107		 RGD
Ensembl		 PMID:7782310 GO_REF:0000107 NCBI chr14:95,598,650...95,631,326
Ensembl chr14:91,397,019...91,454,131 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:7535379 RGD:7777104 NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:228,408,947...229,639,080 		JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in ISO
IEA
IBA		 (PMID:11356846), (PMID:20068046)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:11356846 PMID:20068046 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:161,915,397...162,017,802
Ensembl chr 1:152,504,186...152,606,591 		JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I IDA RGD PMID:8396727 PMID:8943280 RGD:631732, RGD:2315982 NCBI chr 4:85,924,171...85,972,973
Ensembl chr 4:84,593,892...84,642,700 		JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO
IEA		 (PMID:9322919)
GO_REF:0000107		 RGD
Ensembl		 PMID:9322919 GO_REF:0000107 NCBI chr13:45,598,116...45,611,680
Ensembl chr13:43,046,267...43,057,792 		JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) RGD PMID:8376943 NCBI chr13:86,583,727...86,606,902
Ensembl chr13:84,052,493...84,074,492 		JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor IDA RGD PMID:1332507 RGD:2316794 NCBI chr 1:50,428,064...50,459,537
Ensembl chr 1:47,880,309...47,911,709 		JBrowse link
G Ntsr1 neurotensin receptor 1 IMP RGD PMID:11861328 RGD:9743897 NCBI chr 3:187,983,778...188,033,934
Ensembl chr 3:167,606,215...167,656,377 		JBrowse link
G Ptafr platelet-activating factor receptor IDA RGD PMID:8798508 RGD:9999203 NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:144,765,976...144,795,251 		JBrowse link
G Pth parathyroid hormone involved_in ISO
IEA		 (PMID:11604398)
GO_REF:0000107		 RGD
Ensembl		 PMID:11604398 GO_REF:0000107 NCBI chr 1:176,942,901...176,946,034
Ensembl chr 1:167,508,598...167,511,530 		JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in IDA PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chr 8:119,572,295...119,597,405
Ensembl chr 8:110,697,485...110,719,729 		JBrowse link
G Snca synuclein alpha involved_in ISO
IEA		 (PMID:15641770)
GO_REF:0000107		 RGD
Ensembl		 PMID:15641770 GO_REF:0000107 NCBI chr 4:91,026,474...91,127,444
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15705806)		 UniProt
RGD		 PMID:15705806 GO_REF:0000024 NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889 		JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in IEA
ISO		 GO_REF:0000107
(PMID:10493819)		 Ensembl
RGD		 PMID:10493819 GO_REF:0000107 NCBI chr 6:11,415,361...11,480,834
Ensembl chr 6:5,661,871...5,724,521 		JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:20068007 RGD:6902910 NCBI chr 7:111,224,291...111,304,963
Ensembl chr 7:109,343,706...109,424,457 		JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in IDA PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chr 2:147,391,661...147,397,870
Ensembl chr 2:145,241,849...145,248,457 		JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO (PMID:8670200) RGD PMID:8670200 NCBI chr 1:164,707,188...164,742,689
Ensembl chr 1:155,295,111...155,330,808 		JBrowse link
G Plcd1 phospholipase C, delta 1 IMP RGD PMID:16709602 RGD:2300424 NCBI chr 8:127,672,955...127,695,939
Ensembl chr 8:118,795,201...118,818,186 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO MGI:1856024|MGI:1856025 (PMID:11371619) RGD PMID:11371619 NCBI chr11:16,763,312...16,781,295
Ensembl chr11:3,317,058...3,334,801 		JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 IMP RGD PMID:20705669 RGD:5509896 NCBI chr 1:163,249,654...163,321,711
Ensembl chr 1:153,838,078...153,904,061 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 IMP RGD PMID:20705669 RGD:5509896 NCBI chr 1:211,010,259...211,031,013
Ensembl chr 1:201,581,480...201,601,582 		JBrowse link
G Ntsr1 neurotensin receptor 1 IDA RGD PMID:12869647 RGD:596992334 NCBI chr 3:187,983,778...188,033,934
Ensembl chr 3:167,606,215...167,656,377 		JBrowse link
sorbitol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B1 IMP RGD PMID:6690344 PMID:21376710 RGD:1626096, RGD:8548687 NCBI chr 4:63,899,222...63,913,315
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within ISO
IEA		 MGI:3815115 (PMID:19416652)
GO_REF:0000107		 RGD
Ensembl		 PMID:19416652 GO_REF:0000107 NCBI chr17:12,029,189...12,068,234
Ensembl chr17:11,877,249...11,916,295 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within ISO
IEA		 (PMID:9363775)
GO_REF:0000107		 RGD
Ensembl		 PMID:9363775 GO_REF:0000107 NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:106,950,949...107,031,542 		JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect ISO
IEA		 (PMID:26510981)
GO_REF:0000107		 RGD
Ensembl		 PMID:26510981 GO_REF:0000107 NCBI chr 3:28,642,660...28,662,689
Ensembl chr 3:8,244,639...8,264,537 		JBrowse link
G Acer1 alkaline ceramidase 1 involved_in ISO
IEA
IBA		 (PMID:17713573), (PMID:20207939), (PMID:20628055)
GO_REF:0000117
(PMID:27126290), (PMID:29056331)
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:17713573 PMID:20207939 PMID:20628055 PMID:27126290 PMID:29056331 GO_REF:0000033 GO_REF:0000117 NCBI chr 9:1,881,361...1,911,439
Ensembl chr 9:1,793,139...1,824,434 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in ISO
IEA
IBA		 (PMID:16940153), (PMID:20089856), (PMID:20207939), (PMID:20628055)
GO_REF:0000117
(PMID:29401619)
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:16940153 PMID:20089856 PMID:20207939 PMID:20628055 PMID:29401619 GO_REF:0000033 GO_REF:0000117 NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in ISO
IEA		 (PMID:20068046), (PMID:20207939), (PMID:26792856)
GO_REF:0000107
GO_REF:0000117
(PMID:26474409)		 RGD
Ensembl
UniProt		 PMID:20068046 PMID:20207939 PMID:26474409 PMID:26792856 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:161,915,397...162,017,802
Ensembl chr 1:152,504,186...152,606,591 		JBrowse link
G Agk acylglycerol kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:70,081,550...70,160,642
Ensembl chr 4:69,114,269...69,193,934 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:9653654)
(PMID:10610716), (PMID:12815059)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:9653654 PMID:10610716 PMID:12815059 GO_REF:0000024 GO_REF:0000107 NCBI chr16:57,669,927...57,701,349
Ensembl chr16:50,966,229...51,008,233 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IDA
ISO
IBA		 PMID:10488143
(PMID:10652340), (PMID:16126722), (PMID:16380386)
GO_REF:0000033
PMID:15123644
PMID:15217782
(PMID:30154232)		 RGD
GO_Central		 PMID:10652340 PMID:16126722 PMID:16380386 PMID:30154232 PMID:10488143 More... GO_REF:0000033, RGD:13838800, RGD:13838793, RGD:13838794 NCBI chr 1:239,278,994...239,386,598
Ensembl chr 1:229,865,662...229,939,162 		JBrowse link
G ENSRNOG00000069695 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr14:25,729,638...25,730,194 JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO
IEA		 (PMID:19279011)
GO_REF:0000107		 RGD
Ensembl		 PMID:19279011 GO_REF:0000107 NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO
IBA
IEA		 UniProtKB:Q9NRA0 (PMID:23106337)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:23106337 GO_REF:0000033 GO_REF:0000107 NCBI chr10:102,257,413...102,263,086
Ensembl chr10:101,758,711...101,764,240 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO
IEA		 UniProtKB:Q9NYA1 (PMID:23106337)
GO_REF:0000107		 RGD
Ensembl		 PMID:23106337 GO_REF:0000107 NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:96,180,887...96,188,391 		JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:19416851), (PMID:33558761)
GO_REF:0000107
MGI:3815115 (PMID:16216550)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16216550 PMID:19416851 PMID:33558761 GO_REF:0000033 GO_REF:0000107 NCBI chr17:12,029,189...12,068,234
Ensembl chr17:11,877,249...11,916,295 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:19416851), (PMID:33558761)
GO_REF:0000107
MGI:3815117 (PMID:16216550)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16216550 PMID:19416851 PMID:33558761 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:106,950,949...107,031,542 		JBrowse link
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 involved_in ISO
IEA
IBA		 (PMID:19416851)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:19416851 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:147,301,570...147,431,696
Ensembl chr 3:126,847,878...126,978,010 		JBrowse link
G Sptssa serine palmitoyltransferase, small subunit A involved_in ISO
IEA		 (PMID:19416851), (PMID:33558761)
GO_REF:0000107		 RGD
Ensembl		 PMID:19416851 PMID:33558761 GO_REF:0000107 NCBI chr 6:77,879,931...77,891,344
Ensembl chr 6:72,144,714...72,156,214 		JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B involved_in ISO (PMID:19416851) RGD PMID:19416851 NCBI chr 2:156,432,509...156,461,936
Ensembl chr 2:154,133,733...154,163,120 		JBrowse link
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07068905.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 8:817,915...819,124 JBrowse link
G Dhfr dihydrofolate reductase involved_in ISO (PMID:23707606)
(PMID:19666465), (PMID:21402147)		 RGD PMID:19666465 PMID:21402147 PMID:23707606 NCBI chr 2:25,320,895...25,346,004
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in ISO
IBA
IEA		 (PMID:17101830), (PMID:19666465), (PMID:7678411), (PMID:9445252)
GO_REF:0000033
GO_REF:0000043		 RGD
GO_Central
UniProt		 PMID:7678411 PMID:9445252 PMID:17101830 PMID:19666465 GO_REF:0000033 GO_REF:0000043 NCBI chr15:22,884,006...22,917,412
Ensembl chr15:20,402,527...20,437,698 		JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr20:29,573,362...29,587,181
Ensembl chr20:28,953,864...29,044,292
Ensembl chr20:28,953,864...29,044,292 		JBrowse link
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:8,850,349...8,902,420
Ensembl chr17:8,845,084...8,910,539 		JBrowse link
G Pts 6-pyruvoyl-tetrahydropterin synthase acts_upstream_of_or_within
involved_in		 TAS
IEA
ISO		 GO_REF:0000107
GO_REF:0000043
GO_REF:0000002
(PMID:9894812)
GO_REF:0000041		 Ensembl
UniProt
InterPro
RGD		 PMID:9894812 PMID:1939130 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107, RGD:68294 NCBI chr 8:59,767,234...59,774,265
Ensembl chr 8:50,870,841...50,877,869 		JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in TAS
IBA
IEA
IMP
IDA		 GO_REF:0000033
GO_REF:0000043
PMID:1898002		 GO_Central
UniProt
RGD		 PMID:3680258 PMID:1898002 PMID:9235988 PMID:660556 GO_REF:0000033 GO_REF:0000043, RGD:729701, RGD:8553309, RGD:5128582, RGD:4139903 NCBI chr14:65,670,251...65,683,853
Ensembl chr14:65,670,131...65,683,854 		JBrowse link
G Spr sepiapterin reductase involved_in TAS
IEA
ISO
IBA
IMP		 GO_REF:0000002
(PMID:23640889)
GO_REF:0000033		 InterPro
RGD
GO_Central		 PMID:23640889 PMID:2201030 PMID:2179471 GO_REF:0000002 GO_REF:0000033, RGD:70022, RGD:1600056 NCBI chr 4:119,229,447...119,233,320
Ensembl chr 4:117,671,949...117,675,678 		JBrowse link
G Spr-ps1 sepiapterin reductase, pseudogene 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:117,689,458...117,693,286
Ensembl chr 4:117,689,458...117,692,891 		JBrowse link
G Txndc15 thioredoxin domain containing 15 involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:8,903,248...8,915,714
Ensembl chr17:8,845,084...8,910,539
Ensembl chr 7:8,845,084...8,910,539 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        small molecule metabolic process 1928
          alcohol metabolic process 401
            polyol metabolic process 119
              polyol biosynthetic process 74
                1,5-anhydro-D-fructose biosynthetic process 0
                2-deoxystreptamine biosynthetic process 0
                alditol biosynthetic process + 6
                butirosin biosynthetic process 0
                calcitriol biosynthetic process from calciol 5
                diol biosynthetic process + 27
                gentamycin biosynthetic process 0
                inositol biosynthetic process + 3
                inositol phosphate biosynthetic process + 33
                kanamycin biosynthetic process 0
                neomycin biosynthetic process 0
                paromomycin biosynthetic process 0
                phenolic phthiocerol biosynthetic process 0
                phytosphingosine biosynthetic process 1
                resolvin biosynthetic process + 0
                streptomycin biosynthetic process 0
                terrein biosynthetic process + 0
                tobramycin biosynthetic process 0
                vistamycin biosynthetic process 0
                vomitoxin biosynthetic process 0
paths to the root