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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine nucleoside catabolic process
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Accession:GO:0046135 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).
Synonyms:exact_synonym: pyrimidine nucleoside breakdown;   pyrimidine nucleoside catabolism;   pyrimidine nucleoside degradation


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pyrimidine nucleoside catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,226...49,565,100
JBrowse link
cytidine deamination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase IEA GOC
Ensembl
GO_REF:0000107 GO_REF:0000108 NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,483
JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 IEA GOC GO_REF:0000108 NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173
JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 IEA GOC GO_REF:0000108 NCBI chr 7:36,364,258...36,381,012
Ensembl chr 7:36,364,300...36,384,299
JBrowse link
G CDA cytidine deaminase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:78,824,248...78,849,154
Ensembl chr 6:78,824,284...78,879,462
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr11:18,467,508...18,518,137
Ensembl chr11:18,458,299...18,518,146
JBrowse link
thymidine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,458...120,712,462
JBrowse link
uridine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 IEA Ensembl GO_REF:0000107 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
G UPP2 uridine phosphorylase 2 IEA Ensembl GO_REF:0000107 NCBI chr15:65,088,652...65,131,739
Ensembl chr15:65,088,284...65,131,789
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16530
    metabolic process 10415
      small molecule metabolic process 1598
        nucleobase-containing small molecule metabolic process 509
          nucleoside metabolic process 89
            pyrimidine nucleoside metabolic process 12
              pyrimidine nucleoside catabolic process 9
                blasticidin S catabolic process 0
                pyrimidine deoxyribonucleoside catabolic process + 1
                pyrimidine ribonucleoside catabolic process + 7
Path 2
Term Annotations click to browse term
  biological_process 16530
    metabolic process 10415
      cellular metabolic process 9506
        cellular aromatic compound metabolic process 5087
          nucleobase-containing compound metabolic process 4899
            nucleobase-containing small molecule metabolic process 509
              nucleoside metabolic process 89
                pyrimidine nucleoside metabolic process 12
                  pyrimidine nucleoside catabolic process 9
                    blasticidin S catabolic process 0
                    pyrimidine deoxyribonucleoside catabolic process + 1
                    pyrimidine ribonucleoside catabolic process + 7
paths to the root