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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine nucleoside catabolic process
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Accession:GO:0046135 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).
Synonyms:exact_synonym: pyrimidine nucleoside breakdown;   pyrimidine nucleoside catabolism;   pyrimidine nucleoside degradation


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pyrimidine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567 		JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in ISS
IEA		 UniProt
Ensembl
GOC		 GO_REF:0000024 GO_REF:0000107 GO_REF:0000108 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789 		JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IEA GOC GO_REF:0000108 NCBI chr27:37,102,728...37,114,084
Ensembl chr27:37,103,016...37,114,556 		JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 involved_in IEA GOC GO_REF:0000108 NCBI chr12:9,808,276...9,819,973
Ensembl chr12:9,808,297...9,819,985 		JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 involved_in IEA GOC GO_REF:0000108
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 involved_in IEA GOC GO_REF:0000108 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808 		JBrowse link
G CBX7 chromobox 7 involved_in IEA GOC GO_REF:0000108 NCBI chr10:25,876,022...25,896,284
Ensembl chr10:25,876,016...25,893,501 		JBrowse link
G CDA cytidine deaminase involved_in ISO
IEA		 RGD
InterPro
GOC
Ensembl
TreeGrafter		 PMID:675715 GO_REF:0000002 GO_REF:0000107 GO_REF:0000108 GO_REF:0000118 RGD:2316616 NCBI chr 2:78,305,328...78,327,229
Ensembl chr 2:78,304,726...78,327,247 		JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:2,443,459...2,489,147
Ensembl chr22:2,436,206...2,489,016 		JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,789,786...52,564,802
Ensembl chr 6:51,814,573...52,580,923 		JBrowse link
uridine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:108,215...120,213 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      small molecule metabolic process 1831
        small molecule catabolic process 366
          nucleobase-containing small molecule catabolic process 28
            nucleoside catabolic process 24
              pyrimidine nucleoside catabolic process 11
                blasticidin S catabolic process 0
                pyrimidine deoxyribonucleoside catabolic process + 1
                pyrimidine ribonucleoside catabolic process + 9
Path 2
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      organic substance metabolic process 10554
        organic cyclic compound metabolic process 5907
          nucleobase-containing compound metabolic process 5439
            nucleobase-containing small molecule metabolic process 682
              nucleoside metabolic process 59
                pyrimidine nucleoside metabolic process 16
                  pyrimidine nucleoside catabolic process 11
                    blasticidin S catabolic process 0
                    pyrimidine deoxyribonucleoside catabolic process + 1
                    pyrimidine ribonucleoside catabolic process + 9
paths to the root