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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine nucleoside catabolic process
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Accession:GO:0046135 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).
Synonyms:exact_synonym: pyrimidine nucleoside breakdown;   pyrimidine nucleoside catabolism;   pyrimidine nucleoside degradation


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pyrimidine nucleoside catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 IEA Ensembl GO_REF:0000107 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567
JBrowse link
cytidine deamination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase ISS
IEA
UniProtKB
GOC
GO_REF:0000024 GO_REF:0000108 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 IEA GOC GO_REF:0000108 NCBI chr27:37,102,728...37,114,084
Ensembl chr27:37,103,016...37,114,556
JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 IEA GOC GO_REF:0000108 NCBI chr12:9,808,276...9,819,973
Ensembl chr12:9,808,297...9,819,985
JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 IEA GOC GO_REF:0000108
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 IEA GOC GO_REF:0000108 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808
JBrowse link
G CDA cytidine deaminase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:78,305,328...78,327,229
Ensembl chr 2:78,304,726...78,327,247
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr22:2,443,459...2,489,147
Ensembl chr22:2,436,206...2,489,016
JBrowse link
thymidine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase IEA Ensembl GO_REF:0000107 NCBI chr 6:51,789,786...52,564,802
Ensembl chr 6:51,814,573...52,580,923
JBrowse link
uridine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100856638 uridine phosphorylase 1-like ISO (PMID:7488099)
(MGI:5476603|PMID:23355744), (MGI:73237|PMID:7744869)
UniProt
CACAO
PMID:7488099 PMID:7744869 PMID:23355744 MGI:5476603 MGI:73237

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16176
    metabolic process 10503
      small molecule metabolic process 1618
        nucleobase-containing small molecule metabolic process 548
          nucleoside metabolic process 94
            pyrimidine nucleoside metabolic process 14
              pyrimidine nucleoside catabolic process 10
                blasticidin S catabolic process 0
                pyrimidine deoxyribonucleoside catabolic process + 1
                pyrimidine ribonucleoside catabolic process + 8
Path 2
Term Annotations click to browse term
  biological_process 16176
    metabolic process 10503
      cellular metabolic process 9569
        cellular aromatic compound metabolic process 5094
          nucleobase-containing compound metabolic process 4902
            nucleobase-containing small molecule metabolic process 548
              nucleoside metabolic process 94
                pyrimidine nucleoside metabolic process 14
                  pyrimidine nucleoside catabolic process 10
                    blasticidin S catabolic process 0
                    pyrimidine deoxyribonucleoside catabolic process + 1
                    pyrimidine ribonucleoside catabolic process + 8
paths to the root