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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine deoxyribonucleoside metabolic process
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Accession:GO:0046125 term browser browse the term
Definition:The chemical reactions and pathways involving any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).
Synonyms:exact_synonym: pyrimidine deoxyribonucleoside metabolism

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deoxycytidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase ISO RGD PMID:7686601 PMID:8305745 RGD:2300395 RGD:2300398 NCBI chrNW_004936598:3,819,239...3,846,692
Ensembl chrNW_004936598:3,817,994...3,843,241 		JBrowse link
G Tk2 thymidine kinase 2 ISO RGD PMID:21444706 RGD:5134349 NCBI chrNW_004936475:16,851,380...16,875,195
Ensembl chrNW_004936475:16,851,184...16,875,133 		JBrowse link
thymidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtymk deoxythymidylate kinase involved_in ISO (PMID:12614151) UniProt PMID:12614151 NCBI chrNW_004936745:282,199...289,273 JBrowse link
G Tk1 thymidine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:2,784,891...2,794,693
Ensembl chrNW_004936594:2,784,226...2,794,830 		JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
thymidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tk1 thymidine kinase 1 involved_in ISO
IEA		 phosphorylation RGD
TreeGrafter
Ensembl		 PMID:6642140 GO_REF:0000107 GO_REF:0000118 RGD:2317232 NCBI chrNW_004936594:2,784,891...2,794,693
Ensembl chrNW_004936594:2,784,226...2,794,830 		JBrowse link
G Tk2 thymidine kinase 2 ISO RGD PMID:21444706 RGD:5134349 NCBI chrNW_004936475:16,851,380...16,875,195
Ensembl chrNW_004936475:16,851,184...16,875,133 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15871
    metabolic process 9527
      cellular metabolic process 8291
        heterocycle metabolic process 4795
          pyrimidine-containing compound metabolic process 65
            pyrimidine nucleoside metabolic process 13
              pyrimidine deoxyribonucleoside metabolic process 5
                deoxycytidine metabolic process + 2
                deoxyuridine metabolic process + 0
                pyrimidine deoxyribonucleoside biosynthetic process + 2
                pyrimidine deoxyribonucleoside catabolic process + 1
                pyrimidine deoxyribonucleoside interconversion 0
                thymidine metabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 15871
    metabolic process 9527
      cellular metabolic process 8291
        cellular aromatic compound metabolic process 4861
          nucleobase-containing compound metabolic process 4641
            nucleobase-containing small molecule metabolic process 579
              nucleoside metabolic process 53
                pyrimidine nucleoside metabolic process 13
                  pyrimidine deoxyribonucleoside metabolic process 5
                    deoxycytidine metabolic process + 2
                    deoxyuridine metabolic process + 0
                    pyrimidine deoxyribonucleoside biosynthetic process + 2
                    pyrimidine deoxyribonucleoside catabolic process + 1
                    pyrimidine deoxyribonucleoside interconversion 0
                    thymidine metabolic process + 4
paths to the root