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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleobase catabolic process
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Accession:GO:0046113 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.
Synonyms:exact_synonym: nucleobase breakdown;   nucleobase catabolism;   nucleobase degradation


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guanine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gda guanine deaminase JBrowse link 1 238,982,542 239,057,663 RGD:1600115
hypoxanthine oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Xdh xanthine dehydrogenase JBrowse link 6 25,149,570 25,211,273 RGD:13210503
purine nucleobase catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dpyd dihydropyrimidine dehydrogenase JBrowse link 2 221,823,692 222,694,627 RGD:1624291
RGD:1600115
G Uox urate oxidase JBrowse link 2 252,452,282 252,488,497 RGD:730101
pyrimidine nucleobase catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crmp1 collapsin response mediator protein 1 JBrowse link 14 78,266,931 78,312,777 RGD:13792537
G Dpyd dihydropyrimidine dehydrogenase JBrowse link 2 221,823,692 222,694,627 RGD:1599794
RGD:1624291
G Dpys dihydropyrimidinase JBrowse link 7 78,769,918 78,847,941 RGD:1624291
RGD:13792537
G Dpysl2 dihydropyrimidinase-like 2 JBrowse link 15 43,475,640 43,581,725 RGD:13792537
G Dpysl3 dihydropyrimidinase-like 3 JBrowse link 18 37,716,371 37,819,347 RGD:13792537
G Dpysl4 dihydropyrimidinase-like 4 JBrowse link 1 211,423,022 211,438,533 RGD:13792537
G Dpysl5 dihydropyrimidinase-like 5 JBrowse link 6 26,939,696 27,024,129 RGD:13792537
G LOC103692570 dihydropyrimidinase-related protein 5-like JBrowse link 6 26,423,841 26,446,080 RGD:13792537
thymine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 JBrowse link 6 108,146,552 108,167,185 RGD:1599052
RGD:13792537
RGD:1600115
RGD:1624291
G Dpyd dihydropyrimidine dehydrogenase JBrowse link 2 221,823,692 222,694,627 RGD:1624291
RGD:13792537
RGD:1600115
G Dpys dihydropyrimidinase JBrowse link 7 78,769,918 78,847,941 RGD:1624990
uracil catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dpyd dihydropyrimidine dehydrogenase JBrowse link 2 221,823,692 222,694,627 RGD:1600115
RGD:13792537
RGD:1624291
G Dpys dihydropyrimidinase JBrowse link 7 78,769,918 78,847,941 RGD:1624990
RGD:1624291
xanthine catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aox1 aldehyde oxidase 1 JBrowse link 9 64,929,682 65,007,872 RGD:13792537
G Aox2 aldehyde oxidase 2 JBrowse link 9 65,175,455 65,265,149 RGD:13792537
G Aox3 aldehyde oxidase 3 JBrowse link 9 65,013,831 65,099,433 RGD:13792537
G Aox4 aldehyde oxidase 4 JBrowse link 9 65,110,330 65,167,188 RGD:13792537
G Xdh xanthine dehydrogenase JBrowse link 6 25,149,570 25,211,273 RGD:8553512
RGD:1600115
RGD:1624291
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12096
      organic substance metabolic process 11494
        organonitrogen compound metabolic process 7094
          nucleobase metabolic process 48
            nucleobase catabolic process 16
              purine nucleobase catabolic process + 8
              pyrimidine nucleobase catabolic process + 9
Path 2
Term Annotations click to browse term
  biological_process 19858
    cellular process 18617
      cellular metabolic process 10917
        cellular nitrogen compound metabolic process 6542
          nucleobase-containing compound metabolic process 5344
            nucleobase-containing small molecule metabolic process 582
              nucleobase metabolic process 48
                nucleobase catabolic process 16
                  purine nucleobase catabolic process + 8
                  pyrimidine nucleobase catabolic process + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.