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ONTOLOGY REPORT - ANNOTATIONS

Term:dUMP metabolic process
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Accession:GO:0046078 term browser browse the term
Definition:The chemical reactions and pathways involving dUMP, deoxyuridine (5'-)monophosphate (2'-deoxyuridine 5'-phosphate).
Synonyms:exact_synonym: dUMP metabolism

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dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001512.1 involved_in IBA
IEA		 PMID:21873635
GO_REF:0000041		 UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 Ensembl chr 1:48,565,160...48,565,711 JBrowse link
G Dctd dCMP deaminase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:47,177,144...47,222,850
Ensembl chr16:47,177,145...47,208,110 		JBrowse link
G Dut deoxyuridine triphosphatase involved_in IDA
IEA
IBA		 GO_REF:0000041
PMID:21873635		 UniProt PMID:3032103, PMID:1315924, PMID:21873635 GO_REF:0000041, RGD:2300191, RGD:2301218, RGD:13792537 NCBI chr 3:117,514,399...117,525,450
Ensembl chr 3:117,514,444...117,525,446 		JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516) RGD PMID:10681516 MGI:1353788 NCBI chr10:104,052,807...104,054,805
Ensembl chr10:104,052,831...104,054,805 		JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial acts_upstream_of_or_within ISO (MGI:2388903|PMID:12234672) RGD PMID:12234672 MGI:2388903 NCBI chr10:46,216,494...46,244,478
Ensembl chr10:46,216,884...46,243,077 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (MGI:6478539|PMID:14154460) RGD PMID:14154460 MGI:6478539 NCBI chr14:89,314,234...89,334,060
Ensembl chr14:89,314,176...89,334,276 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19634
    cellular process 18481
      cellular metabolic process 10866
        heterocycle metabolic process 5536
          pyrimidine-containing compound metabolic process 66
            pyrimidine nucleotide metabolic process 39
              pyrimidine deoxyribonucleotide metabolic process 17
                dUMP metabolic process 8
                  dUMP biosynthetic process 3
                  dUMP catabolic process 5
Path 2
Term Annotations click to browse term
  biological_process 19634
    cellular process 18481
      cellular metabolic process 10866
        heterocycle metabolic process 5536
          nucleobase-containing compound metabolic process 5404
            nucleobase-containing small molecule metabolic process 574
              nucleoside phosphate metabolic process 506
                nucleotide metabolic process 498
                  deoxyribonucleotide metabolic process 42
                    2'-deoxyribonucleotide metabolic process 36
                      pyrimidine deoxyribonucleotide metabolic process 17
                        dUMP metabolic process 8
                          dUMP biosynthetic process 3
                          dUMP catabolic process 5
paths to the root