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ONTOLOGY REPORT - ANNOTATIONS


Term:dUMP metabolic process
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Accession:GO:0046078 term browser browse the term
Definition:The chemical reactions and pathways involving dUMP, deoxyuridine (5'-)monophosphate (2'-deoxyuridine 5'-phosphate).
Synonyms:exact_synonym: dUMP metabolism


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dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTD dCMP deaminase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:44,466,312...44,492,594
Ensembl chr15:44,466,304...44,492,406
JBrowse link
G DUT deoxyuridine triphosphatase involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:1315924 PMID:3032103 PMID:21873635 GO_REF:0000041 RGD:2300191 RGD:2301218 NCBI chr 1:123,451,207...123,462,267
Ensembl chr 1:123,451,212...123,462,232
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,458...120,712,462
JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:32,791,152...32,879,489
Ensembl chr 4:32,789,460...32,879,489
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2388903|PMID:12234672) Ensembl
MGI
PMID:12234672 GO_REF:0000107 MGI:2388903 NCBI chr12:60,979,496...60,994,577
Ensembl chr12:60,979,499...60,994,582
JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,226...49,565,100
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:6478539|PMID:14154460) MGI PMID:14154460 MGI:6478539 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16538
    cellular process 15825
      cellular metabolic process 9520
        heterocycle metabolic process 5024
          pyrimidine-containing compound metabolic process 64
            pyrimidine nucleotide metabolic process 40
              pyrimidine deoxyribonucleotide metabolic process 17
                dUMP metabolic process 8
                  dUMP biosynthetic process 2
                  dUMP catabolic process 6
Path 2
Term Annotations click to browse term
  biological_process 16538
    cellular process 15825
      cellular metabolic process 9520
        heterocycle metabolic process 5024
          nucleobase-containing compound metabolic process 4906
            nucleobase-containing small molecule metabolic process 502
              nucleoside phosphate metabolic process 442
                nucleotide metabolic process 433
                  deoxyribonucleotide metabolic process 41
                    2'-deoxyribonucleotide metabolic process 36
                      pyrimidine deoxyribonucleotide metabolic process 17
                        dUMP metabolic process 8
                          dUMP biosynthetic process 2
                          dUMP catabolic process 6
paths to the root