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ONTOLOGY REPORT - ANNOTATIONS


Term:dUMP metabolic process
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Accession:GO:0046078 term browser browse the term
Definition:The chemical reactions and pathways involving dUMP, deoxyuridine (5'-)monophosphate (2'-deoxyuridine 5'-phosphate).
Synonyms:exact_synonym: dUMP metabolism


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dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:48,099,092...48,141,667
Ensembl chr 8:48,099,092...48,153,233
JBrowse link
G Dut deoxyuridine triphosphatase acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:6201960|PMID:21873635) MGI
RGD
GO_Central
PMID:1315924 PMID:3032103 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:2300191 RGD:2301218 NCBI chr 2:125,247,248...125,259,049
Ensembl chr 2:125,247,190...125,258,608
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5',3'-nucleotidase, cytosolic involved_in IDA (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr11:115,490,420...115,492,070
Ensembl chr11:115,490,420...115,491,862
JBrowse link
G Nt5c3 5'-nucleotidase, cytosolic III involved_in ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 6:56,882,400...56,924,008
Ensembl chr 6:56,882,400...56,923,932
JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial acts_upstream_of_or_within IDA (MGI:2388903|PMID:12234672) MGI PMID:12234672 MGI:2388903 NCBI chr11:59,847,947...59,876,533
Ensembl chr11:59,839,447...59,880,968
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IDA (MGI:6478539|PMID:14154460) MGI PMID:14154460 MGI:6478539 NCBI chr11:9,118,008...9,136,170
Ensembl chr11:9,118,103...9,136,170
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23319
    cellular process 17443
      cellular metabolic process 9993
        heterocycle metabolic process 5329
          pyrimidine-containing compound metabolic process 59
            pyrimidine nucleotide metabolic process 34
              pyrimidine deoxyribonucleotide metabolic process 16
                dUMP metabolic process 6
                  dUMP biosynthetic process 2
                  dUMP catabolic process 4
Path 2
Term Annotations click to browse term
  biological_process 23319
    cellular process 17443
      cellular metabolic process 9993
        heterocycle metabolic process 5329
          nucleobase-containing compound metabolic process 5199
            nucleobase-containing small molecule metabolic process 512
              nucleoside phosphate metabolic process 450
                nucleotide metabolic process 442
                  deoxyribonucleotide metabolic process 39
                    2'-deoxyribonucleotide metabolic process 34
                      pyrimidine deoxyribonucleotide metabolic process 16
                        dUMP metabolic process 6
                          dUMP biosynthetic process 2
                          dUMP catabolic process 4
paths to the root