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ONTOLOGY REPORT - ANNOTATIONS


Term:dUMP metabolic process
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Accession:GO:0046078 term browser browse the term
Definition:The chemical reactions and pathways involving dUMP, deoxyuridine (5'-)monophosphate (2'-deoxyuridine 5'-phosphate).
Synonyms:exact_synonym: dUMP metabolism


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dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTD dCMP deaminase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:47,350,493...47,376,184
Ensembl chr16:47,350,357...47,375,127
JBrowse link
G DUT deoxyuridine triphosphatase involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:1315924 PMID:3032103 PMID:21873635 GO_REF:0000041 RGD:2300191 RGD:2301218 NCBI chr30:14,572,766...14,585,621
Ensembl chr30:14,572,602...14,585,530
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,789,786...52,564,802
Ensembl chr 6:51,814,573...52,580,923
JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:5,583,795...5,659,355
Ensembl chr13:5,583,801...5,659,463
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2388903|PMID:12234672) Ensembl
MGI
PMID:12234672 GO_REF:0000107 MGI:2388903 NCBI chr 5:42,080,654...42,117,919
Ensembl chr 5:42,080,645...42,117,741
JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:6478539|PMID:14154460) MGI PMID:14154460 MGI:6478539 NCBI chr18:108,215...120,213 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16213
    cellular process 15540
      cellular metabolic process 9615
        heterocycle metabolic process 5044
          pyrimidine-containing compound metabolic process 66
            pyrimidine nucleotide metabolic process 39
              pyrimidine deoxyribonucleotide metabolic process 16
                dUMP metabolic process 8
                  dUMP biosynthetic process 2
                  dUMP catabolic process 6
Path 2
Term Annotations click to browse term
  biological_process 16213
    cellular process 15540
      cellular metabolic process 9615
        heterocycle metabolic process 5044
          nucleobase-containing compound metabolic process 4927
            nucleobase-containing small molecule metabolic process 539
              nucleoside phosphate metabolic process 472
                nucleotide metabolic process 464
                  deoxyribonucleotide metabolic process 39
                    2'-deoxyribonucleotide metabolic process 33
                      pyrimidine deoxyribonucleotide metabolic process 16
                        dUMP metabolic process 8
                          dUMP biosynthetic process 2
                          dUMP catabolic process 6
paths to the root