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ONTOLOGY REPORT - ANNOTATIONS


Term:dTMP metabolic process
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Accession:GO:0046073 term browser browse the term
Definition:The chemical reactions and pathways involving dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate).
Synonyms:exact_synonym: dTMP metabolism



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dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:44,066,952...44,098,654
Ensembl chr16:44,055,128...44,098,446
JBrowse link
G Dut deoxyuridine triphosphatase involved_in ISO (PMID:10952785), (PMID:15322254) RGD PMID:10952785 PMID:15322254 NCBI chr 3:112,498,864...112,509,994
Ensembl chr 3:112,498,982...112,510,771
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (MGI:3849912|PMID:19513116) RGD PMID:19513116 MGI:3849912 NCBI chr10:45,468,698...45,497,820
Ensembl chr10:45,468,700...45,497,820
JBrowse link
G Tyms thymidylate synthetase involved_in IDA
ISO
IBA
IEA
(PMID:11278511), (PMID:15093541), (PMID:8845352)
(MGI:5300404|PMID:22057276)
PMID:21873635
GO_REF:0000002
RGD
InterPro
PMID:8845352 PMID:11278511 PMID:15093541 PMID:22057276 PMID:9894005 More... GO_REF:0000002 MGI:5300404, RGD:1545055, RGD:13792537 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536
JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) RGD PMID:6301357 MGI:55510 NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954
JBrowse link
G Tymp thymidine phosphorylase involved_in ISO MGI:2183547 (MGI:2183137|PMID:12077348) RGD PMID:12077348 MGI:2183137 NCBI chr 7:120,438,768...120,444,088
Ensembl chr 7:120,438,770...120,443,874
Ensembl chr 7:120,438,770...120,443,874
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO MGI:3699164 (MGI:2183137|PMID:12077348) RGD PMID:12077348 MGI:2183137 NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    cellular process 18675
      cellular metabolic process 10396
        heterocycle metabolic process 5938
          pyrimidine-containing compound metabolic process 72
            pyrimidine nucleotide metabolic process 48
              pyrimidine deoxyribonucleotide metabolic process 19
                dTMP metabolic process 7
                  dTMP biosynthetic process + 4
                  dTMP catabolic process 3
Path 2
Term Annotations click to browse term
  biological_process 20091
    cellular process 18675
      cellular metabolic process 10396
        heterocycle metabolic process 5938
          nucleobase-containing compound metabolic process 5780
            nucleobase-containing small molecule metabolic process 695
              nucleoside phosphate metabolic process 621
                nucleotide metabolic process 611
                  deoxyribonucleotide metabolic process 45
                    2'-deoxyribonucleotide metabolic process 43
                      pyrimidine deoxyribonucleotide metabolic process 19
                        dTMP metabolic process 7
                          dTMP biosynthetic process + 4
                          dTMP catabolic process 3
paths to the root