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ONTOLOGY REPORT - ANNOTATIONS


Term:dTMP metabolic process
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Accession:GO:0046073 term browser browse the term
Definition:The chemical reactions and pathways involving dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate).
Synonyms:exact_synonym: dTMP metabolism


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dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr16:47,177,144...47,222,850
Ensembl chr16:47,177,145...47,208,110
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO (MGI:3849912|PMID:19513116) RGD PMID:19513116 MGI:3849912 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Tyms thymidylate synthetase involved_in IDA
IBA
ISO
PMID:21873635
(PMID:11278511), (PMID:15093541), (PMID:8845352)
RGD PMID:8845352 PMID:11278511 PMID:15093541, PMID:9894005, PMID:21873635, PMID:21873635 RGD:1545055, RGD:13792537, RGD:13792537 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic ISO
IEA
(MGI:55510|PMID:6301357)
GO_REF:0000107
RGD
Ensembl
PMID:6301357 GO_REF:0000107 MGI:55510 NCBI chr10:104,052,807...104,054,805
Ensembl chr10:104,052,831...104,054,805
JBrowse link
G Tymp thymidine phosphorylase ISO
IEA
MGI:2183547 (MGI:2183137|PMID:12077348)
GO_REF:0000107
RGD
Ensembl
PMID:12077348 GO_REF:0000107 MGI:2183137 NCBI chr 7:130,342,481...130,347,845
Ensembl chr 7:130,342,483...130,347,587
JBrowse link
G Upp1 uridine phosphorylase 1 ISO
IEA
MGI:3699164 (MGI:2183137|PMID:12077348)
GO_REF:0000107
RGD
Ensembl
PMID:12077348 GO_REF:0000107 MGI:2183137 NCBI chr14:89,314,234...89,334,060
Ensembl chr14:89,314,176...89,334,276
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20078
    cellular process 18896
      cellular metabolic process 11076
        heterocycle metabolic process 5644
          pyrimidine-containing compound metabolic process 69
            pyrimidine nucleotide metabolic process 42
              pyrimidine deoxyribonucleotide metabolic process 19
                dTMP metabolic process 6
                  dTMP biosynthetic process + 3
                  dTMP catabolic process 3
Path 2
Term Annotations click to browse term
  biological_process 20078
    cellular process 18896
      cellular metabolic process 11076
        heterocycle metabolic process 5644
          nucleobase-containing compound metabolic process 5512
            nucleobase-containing small molecule metabolic process 598
              nucleoside phosphate metabolic process 526
                nucleotide metabolic process 517
                  deoxyribonucleotide metabolic process 46
                    2'-deoxyribonucleotide metabolic process 40
                      pyrimidine deoxyribonucleotide metabolic process 19
                        dTMP metabolic process 6
                          dTMP biosynthetic process + 3
                          dTMP catabolic process 3
paths to the root