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ONTOLOGY REPORT - ANNOTATIONS


Term:AMP metabolic process
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Accession:GO:0046033 term browser browse the term
Definition:The chemical reactions and pathways involving AMP, adenosine monophosphate.
Synonyms:exact_synonym: AMP metabolism
 related_synonym: adenylate forming enzyme activity



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AMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 involved_in ISO
IEA
RGD
UniProt
PMID:19049516 GO_REF:0000104 RGD:5134369 NCBI chr 9:98,987,348...98,997,252
Ensembl chr 9:127,657,338...127,678,245
JBrowse link
G AK2 adenylate kinase 2 involved_in ISO
IEA
RGD
UniProt
PMID:5010295 GO_REF:0000104 RGD:5490216 NCBI chr 1:32,295,668...32,323,681
Ensembl chr 1:33,480,947...33,508,621
JBrowse link
G AK3 adenylate kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900
JBrowse link
G AK4 adenylate kinase 4 involved_in IEA UniProt GO_REF:0000104 NCBI chr 1:64,394,898...64,479,536
Ensembl chr 1:66,283,102...66,361,230
JBrowse link
G AMPD2 adenosine monophosphate deaminase 2 involved_in ISO (MGI:5489878|PMID:22212473) CACAO PMID:22212473 MGI:5489878 NCBI chr 1:111,997,440...112,009,662
Ensembl chr 1:111,225,522...111,237,778
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 acts_upstream_of_or_within
involved_in
ISO (MGI:5476853|PMID:23439682)
(MGI:5529149|PMID:23078545)
MGI
CACAO
PMID:23078545 PMID:23439682 MGI:5476853 MGI:5529149 NCBI chr11:10,581,730...10,638,777
Ensembl chr11:10,309,436...10,365,369
JBrowse link
'de novo' AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000107 NCBI chr22:21,249,920...21,271,749
Ensembl chr22:39,068,764...39,389,221
JBrowse link
G ADSS2 adenylosuccinate synthase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:220,020,480...220,063,658
Ensembl chr 1:225,401,544...225,444,984
JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:102,574,700...102,612,492
Ensembl chr2B:221,159,439...221,197,360
JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:19,871,656...19,909,893
Ensembl chr21:33,244,457...33,282,331
JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:67,461,799...67,491,300
Ensembl chr 4:74,031,397...74,059,857
JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,389,389...43,409,454
Ensembl chr17:48,121,606...48,141,720
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase involved_in ISO (MGI:6718248|PMID:6327016) MGI PMID:6327016 MGI:6718248 NCBI chr 4:67,491,407...67,533,822
Ensembl chr 4:74,059,966...74,102,002
JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in ISO
IEA
RGD
Ensembl
PMID:3759987 GO_REF:0000107 RGD:5135303 NCBI chr22:21,249,920...21,271,749
Ensembl chr22:39,068,764...39,389,221
JBrowse link
G ADSS2 adenylosuccinate synthase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:64874|PMID:8308018) MGI
Ensembl
InterPro
PMID:8308018 GO_REF:0000002 GO_REF:0000107 MGI:64874 NCBI chr 1:220,020,480...220,063,658
Ensembl chr 1:225,401,544...225,444,984
JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:96,720,988...96,743,594
Ensembl chr  X:107,094,898...107,117,117
JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:5,403,465...5,436,751
Ensembl chr  X:12,693,286...12,726,355
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr11:10,581,730...10,638,777
Ensembl chr11:10,309,436...10,365,369
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:38,943,479...38,962,804
Ensembl chr 1:40,275,870...40,289,221
JBrowse link
G NT5C1B 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) MGI PMID:11690631 MGI:2153435 NCBI chr2A:18,542,502...18,569,114 JBrowse link
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3770326|PMID:16547283) RGD
Ensembl
MGI
PMID:16547283 PMID:21414400 GO_REF:0000107 MGI:3770326 RGD:5134346 NCBI chr 6:83,333,428...83,379,585
Ensembl chr 6:86,615,409...86,661,601
JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chr13:9,259,104...9,270,066 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900
JBrowse link
G AK9 adenylate kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:107,296,088...107,495,623
Ensembl chr 6:111,344,834...111,539,932
JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G ADK adenosine kinase involved_in IEA Ensembl
UniProt
GO_REF:0000041 GO_REF:0000107 NCBI chr10:70,672,967...71,236,950
Ensembl chr10:73,342,900...73,902,490
JBrowse link
G ADSL adenylosuccinate lyase involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,249,920...21,271,749
Ensembl chr22:39,068,764...39,389,221
JBrowse link
G APRT adenine phosphoribosyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85816|PMID:8864750) MGI
Ensembl
UniProt
PMID:8864750 GO_REF:0000041 GO_REF:0000107 MGI:85816 NCBI chr16:69,522,628...69,525,138
Ensembl chr16:89,179,020...89,181,504
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:123,609,248...123,650,102
Ensembl chr  X:133,916,681...133,948,197
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15230
    metabolic process 9937
      nitrogen compound metabolic process 8437
        organonitrogen compound metabolic process 5757
          purine-containing compound metabolic process 362
            purine nucleotide metabolic process 340
              purine ribonucleotide metabolic process 322
                AMP metabolic process 25
                  AMP biosynthetic process + 13
                  AMP catabolic process 7
                  AMP phosphorylation 2
Path 2
Term Annotations click to browse term
  biological_process 15230
    metabolic process 9937
      cellular metabolic process 8986
        cellular aromatic compound metabolic process 4911
          nucleobase-containing compound metabolic process 4712
            nucleobase-containing small molecule metabolic process 473
              nucleoside phosphate metabolic process 417
                nucleotide metabolic process 411
                  purine nucleotide metabolic process 340
                    purine ribonucleotide metabolic process 322
                      AMP metabolic process 25
                        AMP biosynthetic process + 13
                        AMP catabolic process 7
                        AMP phosphorylation 2
paths to the root