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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of embryonic development
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Accession:GO:0045995 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of embryonic development.


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regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG6 BAG cochaperone 6 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:23,756,897...23,768,659
Ensembl chr 7:23,756,897...23,775,893
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,790...94,350,312
JBrowse link
G EHMT1 euchromatic histone lysine methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6451356|PMID:31761678) Ensembl
MGI
PMID:31761678 GO_REF:0000107 MGI:6451356 NCBI chr13:39,046,961...39,088,926
Ensembl chr13:39,046,465...39,088,875
JBrowse link
G INSR insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,139
JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:100,332,843...100,468,457
Ensembl chr 6:100,332,873...100,468,454
JBrowse link
G LAMA2 laminin subunit alpha 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:33,765,412...34,359,741
Ensembl chr 1:33,867,639...34,359,698
JBrowse link
G LAMA3 laminin subunit alpha 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:108,548,818...108,805,700
Ensembl chr 6:108,548,837...108,805,693
JBrowse link
G LAMA4 laminin subunit alpha 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:78,071,990...78,224,564
Ensembl chr 1:78,071,446...78,224,365
JBrowse link
G NFE2L2 nuclear factor, erythroid 2 like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3040741|PMID:15087497) Ensembl
MGI
PMID:15087497 GO_REF:0000107 MGI:3040741 NCBI chr15:82,967,485...83,146,185
Ensembl chr15:82,973,648...83,146,183
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,152,455...22,364,373
Ensembl chr16:22,152,501...22,363,847
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4420513|PMID:19884348) Ensembl
MGI
PMID:19884348 GO_REF:0000107 MGI:4420513 NCBI chr 2:2,057,679...2,058,675
Ensembl chr 2:2,057,679...2,058,694
JBrowse link
G RAB14 RAB14, member RAS oncogene family involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:261,228,112...261,256,913
Ensembl chr 1:261,228,673...261,256,791
JBrowse link
G RACGAP1 Rac GTPase activating protein 1 involved_in ISO (MGI:1934490|PMID:11287179) UniProt PMID:11287179 MGI:1934490 NCBI chr 5:15,894,314...15,943,619
Ensembl chr 5:15,904,707...15,943,614
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:76,854,218...76,857,143
Ensembl chr 4:76,852,230...76,857,139
JBrowse link
G TDG thymine DNA glycosylase involved_in ISO (MGI:5141157|PMID:21722948), (MGI:5487523|PMID:21278727) UniProt PMID:21278727 PMID:21722948 MGI:5141157 MGI:5487523 NCBI chr 5:80,473,233...80,492,295
Ensembl chr 5:80,473,233...80,492,287
JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:130,784,567...130,940,497
Ensembl chr15:130,787,581...130,939,575
JBrowse link
inhibition of neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640721|PMID:16678814) Ensembl
MGI
PMID:16678814 GO_REF:0000107 MGI:3640721 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,349,965...73,360,618
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689)
(MGI:4361775|PMID:19805295)
Ensembl
MGI
PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr18:28,945,825...28,993,969
Ensembl chr18:28,946,277...29,028,107
JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr 4:107,906,141...107,923,343
Ensembl chr 4:107,903,502...107,921,118
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX18 T-box transcription factor 18 involved_in ISO (MGI:3722519|PMID:17584735) BHF-UCL PMID:17584735 MGI:3722519 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,837,454...53,867,475
JBrowse link
negative regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP2 secreted frizzled related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,133...75,345,926
JBrowse link
negative regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPS6KA6 ribosomal protein S6 kinase A6 involved_in ISO (MGI:3041939|PMID:15121846) UniProt PMID:15121846 MGI:3041939 NCBI chr  X:67,234,684...67,415,114
Ensembl chr  X:67,236,473...67,415,024
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,689
JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3804618|PMID:18173746) Ensembl
MGI
PMID:18173746 GO_REF:0000107 MGI:3804618 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,724...131,138,236
JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:29,782,613...30,042,727
Ensembl chr15:29,782,604...30,042,734
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr13:19,305,430...19,510,589
Ensembl chr13:19,305,180...19,510,585
JBrowse link
G DAG1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,028,019...32,092,450
Ensembl chr13:32,029,329...32,092,453
JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,902,099...45,949,415
Ensembl chr 9:45,902,105...45,949,417
JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:147,778,420...148,025,943
Ensembl chr13:147,778,053...148,087,744
JBrowse link
G PLCXD2 phosphatidylinositol specific phospholipase C X domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:148,033,712...148,087,766
Ensembl chr13:147,778,053...148,087,744
JBrowse link
positive regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,010,607...15,015,007
Ensembl chr 5:15,010,985...15,014,079
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,154,086...51,202,176
JBrowse link
G WNT4 Wnt family member 4 involved_in ISO (PMID:10654605) BHF-UCL PMID:10654605 NCBI chr 6:80,110,238...80,138,165 JBrowse link
positive regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMOT angiomotin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2655854|PMID:12676095) Ensembl
MGI
PMID:12676095 GO_REF:0000107 MGI:2655854 NCBI chr  X:92,581,995...92,647,872
Ensembl chr  X:92,582,046...92,647,857
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:51,257,273...51,334,566
Ensembl chr17:51,259,786...51,356,803
JBrowse link
G CFL1 cofilin 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035
JBrowse link
G FOXA2 forkhead box A2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,400...30,001,707
JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISO (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr 1:52,996,706...52,999,074 JBrowse link
G LHX1 LIM homeobox 1 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
G NLRP5 NLR family pyrin domain containing 5 involved_in ISO (MGI:5430272|PMID:22357545) UniProt PMID:22357545 MGI:5430272 NCBI chr 6:60,375,670...60,418,908
Ensembl chr 6:60,379,623...60,409,465
JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:69,464,798...69,577,638
Ensembl chr13:69,464,795...69,576,866
JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr 1:186,028,575...186,039,026
Ensembl chr 1:186,028,575...186,038,229
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,567,337...48,735,838
JBrowse link
G PLCB1 phospholipase C beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,007,197...17,745,314
Ensembl chr17:17,007,261...17,745,312
JBrowse link
G RBM19 RNA binding motif protein 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:38,082,042...38,202,548
Ensembl chr14:38,082,077...38,204,754
JBrowse link
G TLE6 TLE family member 6, subcortical maternal complex member involved_in ISO (MGI:6296386|PMID:25208553) UniProt PMID:25208553 MGI:6296386 NCBI chr 2:75,537,641...75,550,676 JBrowse link
G UTP25 UTP25 small subunit processor component involved_in ISO (MGI:6285032|PMID:29262616) UniProt PMID:29262616 MGI:6285032 NCBI chr 9:133,115,177...133,141,258
Ensembl chr 9:133,105,063...133,141,217
JBrowse link
G ZBED3 zinc finger BED-type containing 3 involved_in ISO (MGI:6467696|PMID:28992324) UniProt PMID:28992324 MGI:6467696 NCBI chr 2:85,945,357...85,958,452 JBrowse link
positive regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,400...30,001,707
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,521,296...118,932,446
JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in ISO (MGI:5009762|PMID:21281489) UniProt PMID:21281489 MGI:5009762 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,852,587...37,897,935
JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr 1:186,028,575...186,039,026
Ensembl chr 1:186,028,575...186,038,229
JBrowse link
G RACK1 receptor for activated C kinase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:57,280,192...57,284,846
Ensembl chr 2:57,279,857...57,284,855
JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chr 4:500,884...503,276
Ensembl chr 4:501,172...502,994
JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in ISO (MGI:3531238|PMID:15489520) UniProt PMID:15489520 MGI:3531238 NCBI chr 9:13,040,615...13,826,957 JBrowse link
regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:29,782,613...30,042,727
Ensembl chr15:29,782,604...30,042,734
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr13:19,305,430...19,510,589
Ensembl chr13:19,305,180...19,510,585
JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:264,277,549...264,301,731
Ensembl chr 1:264,276,572...264,301,725
JBrowse link
G DAG1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,028,019...32,092,450
Ensembl chr13:32,029,329...32,092,453
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69170|PMID:7958910) Ensembl
MGI
PMID:7958910 GO_REF:0000107 MGI:69170 NCBI chr17:46,783,772...46,847,505
Ensembl chr17:46,783,777...46,847,503
JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430444|PMID:20040491) Ensembl
MGI
PMID:20040491 GO_REF:0000107 MGI:4430444 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,349,965...73,360,618
JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,902,099...45,949,415
Ensembl chr 9:45,902,105...45,949,417
JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:147,778,420...148,025,943
Ensembl chr13:147,778,053...148,087,744
JBrowse link
G PLCXD2 phosphatidylinositol specific phospholipase C X domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:148,033,712...148,087,766
Ensembl chr13:147,778,053...148,087,744
JBrowse link
G POGLUT1 protein O-glucosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:140,763,231...140,793,645
Ensembl chr13:140,764,185...140,793,596
JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chr 6:103,226,395...103,234,591
Ensembl chr 6:103,226,397...103,235,856
JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430444|PMID:20040491) Ensembl
MGI
PMID:20040491 GO_REF:0000107 MGI:4430444 NCBI chr17:39,840,649...39,858,162
Ensembl chr17:39,675,084...39,858,159
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16534
    multicellular organismal process 8085
      multicellular organism development 5373
        embryo development 1262
          regulation of embryonic development 61
            inhibition of neuroepithelial cell differentiation + 2
            lung induction + 3
            negative regulation of embryonic development + 2
            positive regulation of embryonic development + 23
            positive regulation of posterior neural plate formation by Wnt signaling pathway 0
            positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
            regulation of basement membrane assembly involved in embryonic body morphogenesis + 6
            regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
            regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
            regulation of embryonic cell shape + 0
            regulation of gastrulation + 20
            regulation of planar cell polarity pathway involved in neural tube closure + 1
Path 2
Term Annotations click to browse term
  biological_process 16534
    biological regulation 12052
      regulation of biological process 11443
        regulation of multicellular organismal process 2794
          regulation of multicellular organismal development 1436
            regulation of embryonic development 61
              inhibition of neuroepithelial cell differentiation + 2
              lung induction + 3
              negative regulation of embryonic development + 2
              positive regulation of embryonic development + 23
              positive regulation of posterior neural plate formation by Wnt signaling pathway 0
              positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
              regulation of basement membrane assembly involved in embryonic body morphogenesis + 6
              regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
              regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
              regulation of embryonic cell shape + 0
              regulation of gastrulation + 20
              regulation of planar cell polarity pathway involved in neural tube closure + 1
paths to the root