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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of embryonic development
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Accession:GO:0045995 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of embryonic development.


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regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BCL2-associated athanogene 6 involved_in IMP (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386 NCBI chr17:35,135,156...35,147,321
Ensembl chr17:35,135,178...35,147,322
JBrowse link
G Dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 involved_in IMP (MGI:5427564|PMID:22422825) UniProt PMID:22422825 MGI:5427564 NCBI chr 3:62,468,015...62,507,034
Ensembl chr 3:62,468,013...62,507,004
JBrowse link
G Ehmt1 euchromatic histone methyltransferase 1 involved_in IMP (MGI:3575040|PMID:15774718) UniProt PMID:15774718 MGI:3575040 NCBI chr 2:24,790,769...24,919,643
Ensembl chr 2:24,789,928...24,919,614
JBrowse link
G Hesx1 homeobox gene expressed in ES cells acts_upstream_of_or_within IMP (MGI:6451356|PMID:31761678) MGI PMID:31761678 MGI:6451356 NCBI chr14:26,994,419...27,002,329
Ensembl chr14:26,994,416...27,002,329
JBrowse link
G Insr insulin receptor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:3,150,922...3,279,649
Ensembl chr 8:3,122,061...3,279,617
JBrowse link
G Lama1 laminin, alpha 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr17:67,697,127...67,822,645
Ensembl chr17:67,697,259...67,822,647
JBrowse link
G Lama2 laminin, alpha 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:26,981,285...27,617,191
Ensembl chr10:26,980,036...27,619,758
JBrowse link
G Lama3 laminin, alpha 3 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr18:12,333,417...12,583,013
Ensembl chr18:12,333,819...12,583,013
JBrowse link
G Lama4 laminin, alpha 4 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:38,965,515...39,110,188
Ensembl chr10:38,965,515...39,110,188
JBrowse link
G Lama5 laminin, alpha 5 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:180,176,373...180,225,904
Ensembl chr 2:180,176,373...180,225,859
JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 acts_upstream_of_or_within IGI (MGI:3040741|PMID:15087497) MGI PMID:15087497 MGI:3040741 NCBI chr 2:75,675,513...75,704,663
Ensembl chr 2:75,675,513...75,704,641
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:8,289,824...8,465,315
Ensembl chr15:8,290,617...8,444,463
JBrowse link
G Noct nocturnin involved_in IMP (MGI:5494762|PMID:23449310) UniProt PMID:23449310 MGI:5494762 NCBI chr 3:51,224,447...51,251,654
Ensembl chr 3:51,224,447...51,251,644
JBrowse link
G Phlda2 pleckstrin homology like domain, family A, member 2 acts_upstream_of_or_within IDA (MGI:4420513|PMID:19884348) MGI PMID:19884348 MGI:4420513 NCBI chr 7:143,501,545...143,503,145
Ensembl chr 7:143,501,545...143,503,150
JBrowse link
G Rab14 RAB14, member RAS oncogene family involved_in IMP (MGI:4889011|PMID:21238925) UniProt PMID:21238925 MGI:4889011 NCBI chr 2:35,180,205...35,201,120
Ensembl chr 2:35,180,205...35,201,120
JBrowse link
G Racgap1 Rac GTPase-activating protein 1 involved_in IMP (MGI:1934490|PMID:11287179) UniProt PMID:11287179 MGI:1934490 NCBI chr15:99,620,496...99,651,656
Ensembl chr15:99,620,496...99,651,656
JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 involved_in IMP (MGI:2178090|PMID:11973269) UniProt PMID:11973269 MGI:2178090 NCBI chr 1:4,490,928...4,497,426
Ensembl chr 1:4,490,931...4,497,354
JBrowse link
G Tdg thymine DNA glycosylase involved_in IMP (MGI:5141157|PMID:21722948), (MGI:5487523|PMID:21278727) UniProt PMID:21278727 PMID:21722948 MGI:5141157 MGI:5487523 NCBI chr10:82,629,814...82,650,799
Ensembl chr10:82,629,828...82,650,799
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IMP (MGI:5303027|PMID:22028794) UniProt PMID:22028794 MGI:5303027 NCBI chr 1:84,721,189...84,850,004
Ensembl chr 1:84,721,189...84,840,516
JBrowse link
inhibition of neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal acts_upstream_of_or_within IMP (MGI:3640721|PMID:16678814) MGI PMID:16678814 MGI:3640721 NCBI chr10:61,417,972...61,425,338
Ensembl chr10:61,417,972...61,425,338
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IMP (MGI:4360856|PMID:19686689)
(MGI:4361775|PMID:19805295)
MGI PMID:19686689 PMID:19805295 MGI:4360856 MGI:4361775 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 acts_upstream_of_or_within IGI (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chr 6:17,985,474...18,032,772
Ensembl chr 6:17,988,940...18,030,585
JBrowse link
G Wnt2b wingless-type MMTV integration site family, member 2B acts_upstream_of_or_within IGI (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chr 3:104,944,805...104,961,709
Ensembl chr 3:104,945,272...104,961,921
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx18 T-box18 involved_in IDA (MGI:3722519|PMID:17584735) BHF-UCL PMID:17584735 MGI:3722519 NCBI chr 9:87,702,800...87,731,260
Ensembl chr 9:87,702,800...87,731,260
JBrowse link
negative regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp2 secreted frizzled-related protein 2 involved_in IDA (MGI:1349347|PMID:10654605) BHF-UCL PMID:10654605 MGI:1349347 NCBI chr 3:83,765,750...83,774,314
Ensembl chr 3:83,766,321...83,774,316
JBrowse link
negative regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rps6ka6 ribosomal protein S6 kinase polypeptide 6 involved_in IDA (MGI:3041939|PMID:15121846) UniProt PMID:15121846 MGI:3041939 NCBI chr  X:111,387,837...111,538,097
Ensembl chr  X:111,388,192...111,537,959
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr 6:134,446,476...134,566,913
Ensembl chr 6:134,446,476...134,566,965
JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IMP (MGI:3804618|PMID:18173746) MGI PMID:18173746 MGI:3804618 NCBI chr16:30,065,357...30,067,796
Ensembl chr16:30,064,384...30,067,796
JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 CLIP associating protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:118,389,058...118,609,462
Ensembl chr 1:118,389,058...118,612,678
JBrowse link
G Clasp2 CLIP associating protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:113,740,077...113,919,697
Ensembl chr 9:113,741,473...113,919,682
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:108,204,861...108,263,977
Ensembl chr 9:108,204,634...108,263,958
JBrowse link
G Phldb1 pleckstrin homology like domain, family B, member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:44,686,308...44,735,248
Ensembl chr 9:44,686,304...44,735,198
JBrowse link
G Phldb2 pleckstrin homology like domain, family B, member 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:45,746,230...45,953,598
Ensembl chr16:45,746,243...45,953,598
JBrowse link
positive regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 wingless-type MMTV integration site family, member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:98,789,857...98,793,830
Ensembl chr15:98,789,857...98,793,837
JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:59,248,036...59,290,751
Ensembl chr11:59,248,033...59,290,752
JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 involved_in ISS
ISO
(MGI:1349347|PMID:10654605) BHF-UCL
MGI
PMID:10654605 GO_REF:0000096 MGI:1349347 MGI:4834177 NCBI chr 4:137,277,635...137,299,501
Ensembl chr 4:137,277,489...137,299,726
JBrowse link
positive regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amot angiomotin acts_upstream_of_or_within IMP (MGI:2655854|PMID:12676095) MGI PMID:12676095 MGI:2655854 NCBI chr  X:145,446,424...145,505,966
Ensembl chr  X:145,446,425...145,505,181
JBrowse link
G B4galt5 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 involved_in IMP (MGI:6238824|PMID:20574042) UniProt PMID:20574042 MGI:6238824 NCBI chr 2:167,298,444...167,349,178
Ensembl chr 2:167,298,444...167,349,183
JBrowse link
G Cfl1 cofilin 1, non-muscle involved_in IMP (MGI:6296386|PMID:25208553) UniProt PMID:25208553 MGI:6296386 NCBI chr19:5,490,455...5,494,031
Ensembl chr19:5,490,455...5,495,201
JBrowse link
G Foxa2 forkhead box A2 involved_in IMP (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr 2:148,042,877...148,046,969
Ensembl chr 2:148,042,877...148,046,969
JBrowse link
G Hspa5 heat shock protein 5 involved_in TAS (MGI:4437543|PMID:19816510) BHF-UCL PMID:19816510 MGI:4437543 NCBI chr 2:34,772,090...34,776,529
Ensembl chr 2:34,771,970...34,777,547
JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in IMP (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr 9:73,101,381...73,106,631
Ensembl chr 9:73,101,836...73,104,438
JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
G Nlrp4f NLR family, pyrin domain containing 4F involved_in IMP (MGI:6389592|PMID:31575650) UniProt PMID:31575650 MGI:6389592 NCBI chr13:65,177,111...65,205,716
Ensembl chr13:65,177,111...65,205,977
JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 involved_in IMP (MGI:5430272|PMID:22357545) UniProt PMID:22357545 MGI:5430272 NCBI chr 7:23,385,889...23,441,923
Ensembl chr 7:23,385,889...23,441,922
JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 involved_in IMP
IBA
(MGI:4355296|PMID:19131575)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:19131575 PMID:21873635 MGI:4355296 MGI:6201960 NCBI chr 6:92,091,418...92,173,058
Ensembl chr 6:92,091,390...92,174,294
JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in IMP (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr14:48,656,781...48,667,644
Ensembl chr14:48,657,677...48,673,819
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 involved_in IMP (MGI:5477842|PMID:23533177) CACAO PMID:23533177 MGI:5477842 NCBI chr11:74,673,949...74,724,384
Ensembl chr11:74,673,949...74,724,670
JBrowse link
G Plcb1 phospholipase C, beta 1 involved_in IMP (MGI:2136696|PMID:11464583) BHF-UCL PMID:11464583 MGI:2136696 NCBI chr 2:134,786,164...135,475,258
Ensembl chr 2:134,786,067...135,475,258
JBrowse link
G Rbm19 RNA binding motif protein 19 involved_in IMP (MGI:3608543|PMID:16027046) UniProt PMID:16027046 MGI:3608543 NCBI chr 5:120,116,513...120,198,971
Ensembl chr 5:120,116,465...120,198,981
JBrowse link
G Tle6 transducin-like enhancer of split 6 involved_in IMP (MGI:6296386|PMID:25208553) UniProt PMID:25208553 MGI:6296386 NCBI chr10:81,590,904...81,601,185
Ensembl chr10:81,590,904...81,601,073
JBrowse link
G Utp25 UTP25 small subunit processome component involved_in IMP (MGI:6285032|PMID:29262616) UniProt PMID:29262616 MGI:6285032 NCBI chr 1:193,104,399...193,130,283
Ensembl chr 1:193,091,104...193,130,272
JBrowse link
G Zbed3 zinc finger, BED type containing 3 involved_in IMP (MGI:6467696|PMID:28992324) UniProt PMID:28992324 MGI:6467696 NCBI chr13:95,323,605...95,337,842
Ensembl chr13:95,323,612...95,337,841
JBrowse link
positive regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in IMP (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr 2:148,042,877...148,046,969
Ensembl chr 2:148,042,877...148,046,969
JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Osr2 odd-skipped related 2 involved_in IMP (MGI:5009762|PMID:21281489) UniProt PMID:21281489 MGI:5009762 NCBI chr15:35,296,098...35,303,305
Ensembl chr15:35,296,098...35,303,305
JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in IMP (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr14:48,656,781...48,667,644
Ensembl chr14:48,657,677...48,673,819
JBrowse link
G Scx scleraxis involved_in IMP (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chr15:76,457,411...76,459,468
Ensembl chr15:76,457,452...76,459,458
JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in IMP (MGI:3531238|PMID:15489520) UniProt PMID:15489520 MGI:3531238 NCBI chr 7:96,171,244...96,911,093
Ensembl chr 7:96,171,246...96,911,093
JBrowse link
regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 CLIP associating protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:118,389,058...118,609,462
Ensembl chr 1:118,389,058...118,612,678
JBrowse link
G Clasp2 CLIP associating protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:113,740,077...113,919,697
Ensembl chr 9:113,741,473...113,919,682
JBrowse link
G Crb2 crumbs family member 2 involved_in IMP (MGI:5700252|PMID:26496195) UniProt PMID:26496195 MGI:5700252 NCBI chr 2:37,776,225...37,799,103
Ensembl chr 2:37,776,249...37,799,103
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:108,204,861...108,263,977
Ensembl chr 9:108,204,634...108,263,958
JBrowse link
G Hnf4a hepatic nuclear factor 4, alpha acts_upstream_of_or_within IMP (MGI:69170|PMID:7958910) MGI PMID:7958910 MGI:69170 NCBI chr 2:163,506,811...163,572,907
Ensembl chr 2:163,506,808...163,572,910
JBrowse link
G Nodal nodal acts_upstream_of_or_within IGI (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chr10:61,417,972...61,425,338
Ensembl chr10:61,417,972...61,425,338
JBrowse link
G Phldb1 pleckstrin homology like domain, family B, member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:44,686,308...44,735,248
Ensembl chr 9:44,686,304...44,735,198
JBrowse link
G Phldb2 pleckstrin homology like domain, family B, member 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:45,746,230...45,953,598
Ensembl chr16:45,746,243...45,953,598
JBrowse link
G Poglut1 protein O-glucosyltransferase 1 involved_in IMP (MGI:5700252|PMID:26496195) UniProt PMID:26496195 MGI:5700252 NCBI chr16:38,525,058...38,550,257
Ensembl chr16:38,525,137...38,550,258
JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within IGI (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chr17:70,844,205...70,853,532
Ensembl chr17:70,844,205...70,853,546
JBrowse link
G Tgif2 TGFB-induced factor homeobox 2 acts_upstream_of_or_within IGI (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chr 2:156,839,817...156,855,570
Ensembl chr 2:156,840,007...156,855,570
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28589
    multicellular organismal process 8942
      multicellular organism development 6005
        embryo development 1306
          regulation of embryonic development 62
            inhibition of neuroepithelial cell differentiation + 2
            lung induction + 3
            negative regulation of embryonic development + 2
            positive regulation of embryonic development + 24
            positive regulation of posterior neural plate formation by Wnt signaling pathway 0
            positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
            regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
            regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
            regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
            regulation of embryonic cell shape + 0
            regulation of gastrulation + 18
            regulation of planar cell polarity pathway involved in neural tube closure + 1
Path 2
Term Annotations click to browse term
  biological_process 28589
    biological regulation 13143
      regulation of biological process 12510
        regulation of multicellular organismal process 2963
          regulation of multicellular organismal development 1537
            regulation of embryonic development 62
              inhibition of neuroepithelial cell differentiation + 2
              lung induction + 3
              negative regulation of embryonic development + 2
              positive regulation of embryonic development + 24
              positive regulation of posterior neural plate formation by Wnt signaling pathway 0
              positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
              regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
              regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
              regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
              regulation of embryonic cell shape + 0
              regulation of gastrulation + 18
              regulation of planar cell polarity pathway involved in neural tube closure + 1
paths to the root