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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of embryonic development
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Accession:GO:0045995 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of embryonic development.


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regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG6 BAG cochaperone 6 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:31,639,028...31,660,900
Ensembl chr 6:31,639,028...31,652,705
JBrowse link
G CCSAP centriole, cilia and spindle associated protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:229,321,015...229,343,795
Ensembl chr 1:229,321,011...229,343,294
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in TAS (PMID:21535261) UniProt PMID:21535261 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G EHMT1 euchromatic histone lysine methyltransferase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:137,619,001...137,836,127
Ensembl chr 9:137,618,992...137,870,016
JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6451356|PMID:31761678) Ensembl
MGI
PMID:31761678 GO_REF:0000107 MGI:6451356 NCBI chr 3:57,197,838...57,227,643
Ensembl chr 3:57,197,838...57,227,606
JBrowse link
G INSR insulin receptor involved_in IMP (PMID:7693131) BHF-UCL PMID:7693131 NCBI chr19:7,112,257...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G LAMA2 laminin subunit alpha 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:128,883,138...129,516,566
Ensembl chr 6:128,883,138...129,516,566
Ensembl chr 6:128,883,138...129,516,566
JBrowse link
G LAMA3 laminin subunit alpha 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:23,689,443...23,955,066
Ensembl chr18:23,689,443...23,956,222
Ensembl chr18:23,689,443...23,956,222
JBrowse link
G LAMA4 laminin subunit alpha 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:112,107,931...112,254,722
Ensembl chr 6:112,107,931...112,254,939
JBrowse link
G LAMA5 laminin subunit alpha 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:62,309,060...62,367,318
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G NFE2L2 nuclear factor, erythroid 2 like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3040741|PMID:15087497) Ensembl
MGI
PMID:15087497 GO_REF:0000107 MGI:3040741 NCBI chr 2:177,230,303...177,265,131
Ensembl chr 2:177,227,595...177,392,697
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IMP (PMID:19242925) BHF-UCL PMID:19242925 NCBI chr 5:36,876,769...37,066,413
Ensembl chr 5:36,876,769...37,066,413
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:139,015,781...139,045,939
Ensembl chr 4:139,015,781...139,045,939
JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4420513|PMID:19884348) Ensembl
MGI
PMID:19884348 GO_REF:0000107 MGI:4420513 NCBI chr11:2,928,273...2,929,420
Ensembl chr11:2,928,273...2,929,420
JBrowse link
G RAB14 RAB14, member RAS oncogene family involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:121,178,133...121,201,869
Ensembl chr 9:121,178,133...121,223,014
JBrowse link
G RACGAP1 Rac GTPase activating protein 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr12:49,989,162...50,033,206
Ensembl chr12:49,976,923...50,033,136
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892
JBrowse link
G TDG thymine DNA glycosylase involved_in ISS UniProt GO_REF:0000024 NCBI chr12:103,965,842...103,988,874
Ensembl chr12:103,965,822...103,988,874
JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:229,763,837...229,923,234
Ensembl chr 2:229,763,837...229,923,239
Ensembl chr 2:229,763,837...229,923,239
JBrowse link
inhibition of neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640721|PMID:16678814) Ensembl
MGI
PMID:16678814 GO_REF:0000107 MGI:3640721 NCBI chr10:70,431,936...70,447,951
Ensembl chr10:70,431,936...70,447,951
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4361775|PMID:19805295)
(MGI:4360856|PMID:19686689)
Ensembl
MGI
PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152
JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX18 T-box transcription factor 18 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 6:84,666,810...84,764,598
Ensembl chr 6:84,687,351...84,764,598
JBrowse link
negative regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP2 secreted frizzled related protein 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083
JBrowse link
negative regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPS6KA6 ribosomal protein S6 kinase A6 involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:84,058,346...84,188,199
Ensembl chr  X:84,058,346...84,188,199
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3804618|PMID:18173746) Ensembl
MGI
PMID:18173746 GO_REF:0000107 MGI:3804618 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in IMP
IGI
(PMID:23940118) UniProt PMID:23940118 NCBI chr 2:121,337,776...121,649,462
Ensembl chr 2:121,337,776...121,649,476
Ensembl chr 2:121,337,776...121,649,476
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in IMP (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:33,496,245...33,718,356
Ensembl chr 3:33,496,245...33,718,356
JBrowse link
G DAG1 dystroglycan 1 involved_in IMP (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:49,468,703...49,535,618
Ensembl chr 3:49,468,703...49,535,618
JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IGI
IMP
(PMID:23940118) UniProt PMID:23940118 NCBI chr11:118,606,296...118,658,028
Ensembl chr11:118,606,440...118,658,031
JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IGI
IMP
(PMID:23940118) UniProt PMID:23940118 NCBI chr 3:111,732,496...111,976,517
Ensembl chr 3:111,732,497...111,976,517
JBrowse link
positive regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 involved_in IDA (PMID:10654605) BHF-UCL PMID:10654605 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620
JBrowse link
G WNT3A Wnt family member 3A involved_in IDA (PMID:10654605) BHF-UCL PMID:10654605 NCBI chr 1:228,006,998...228,067,113
Ensembl chr 1:228,006,998...228,061,271
JBrowse link
G WNT4 Wnt family member 4 involved_in IDA (PMID:10654605) BHF-UCL PMID:10654605 NCBI chr 1:22,117,308...22,143,981
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
positive regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMOT angiomotin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2655854|PMID:12676095) Ensembl
MGI
PMID:12676095 GO_REF:0000107 MGI:2655854 NCBI chr  X:112,774,877...112,840,945
Ensembl chr  X:112,774,503...112,840,815
Ensembl chr  X:112,774,503...112,840,815
Ensembl chr  X:112,774,503...112,840,815
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in ISS UniProt GO_REF:0000024 NCBI chr20:49,632,945...49,713,878
Ensembl chr20:49,632,945...49,713,878
JBrowse link
G CFL1 cofilin 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:65,854,673...65,858,180
Ensembl chr11:65,823,022...65,862,026
JBrowse link
G FOXA2 forkhead box A2 involved_in ISS UniProt GO_REF:0000024 NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,581,005...22,585,455
Ensembl chr20:22,581,005...22,585,455
JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:73,362,658...73,364,171
Ensembl chr 6:73,362,658...73,364,171
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:36,937,475...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G NIBAN2 niban apoptosis regulator 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:127,505,339...127,579,031
Ensembl chr 9:127,505,339...127,578,989
JBrowse link
G NLRP5 NLR family pyrin domain containing 5 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:55,999,726...56,061,810
Ensembl chr19:55,999,726...56,061,810
JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:14,947,583...15,049,273
Ensembl chr 3:14,947,584...15,053,600
JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:56,799,905...56,810,479
Ensembl chr14:56,799,905...56,816,693
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,593,210...2,685,617
Ensembl chr17:2,593,210...2,685,615
JBrowse link
G PLCB1 phospholipase C beta 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr20:8,132,266...8,884,900
Ensembl chr20:8,077,251...8,968,360
JBrowse link
G RBM19 RNA binding motif protein 19 involved_in ISS UniProt GO_REF:0000024 NCBI chr12:113,816,740...113,966,371
Ensembl chr12:113,816,738...113,966,325
JBrowse link
G TLE6 TLE family member 6, subcortical maternal complex member involved_in ISS UniProt GO_REF:0000024 NCBI chr19:2,977,410...2,995,184
Ensembl chr19:2,977,538...2,995,179
JBrowse link
G UTP25 UTP25 small subunit processor component involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:209,827,972...209,857,565
Ensembl chr 1:209,827,972...209,857,565
JBrowse link
G ZBED3 zinc finger BED-type containing 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:77,072,072...77,087,285
Ensembl chr 5:77,072,072...77,087,285
JBrowse link
positive regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 involved_in ISS UniProt GO_REF:0000024 NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,581,005...22,585,455
Ensembl chr20:22,581,005...22,585,455
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:36,937,475...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IMP (PMID:21281489) UniProt PMID:21281489 NCBI chr 2:19,351,485...19,358,623
Ensembl chr 2:19,351,485...19,358,623
JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in ISO (MGI:5009762|PMID:21281489) UniProt PMID:21281489 MGI:5009762 NCBI chr 8:98,944,442...98,952,100
Ensembl chr 8:98,944,403...98,952,104
JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:56,799,905...56,810,479
Ensembl chr14:56,799,905...56,816,693
JBrowse link
G RACK1 receptor for activated C kinase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:181,236,897...181,243,906
Ensembl chr 5:181,236,897...181,248,096
JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:144,265,060...144,268,483
Ensembl chr 8:144,266,453...144,268,481
JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:78,652,829...79,441,030
Ensembl chr11:78,652,829...79,441,030
JBrowse link
regulation of embryonic cell shape term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAG1 dystroglycan 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:49,468,703...49,535,618
Ensembl chr 3:49,468,703...49,535,618
JBrowse link
G SEPTIN7 septin 7 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:35,800,986...35,915,763
Ensembl chr 7:35,800,932...35,907,105
JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:63,119,559...63,588,733
Ensembl chr 2:63,119,559...63,827,843
JBrowse link
regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in IMP (PMID:23940118) UniProt PMID:23940118 NCBI chr 2:121,337,776...121,649,462
Ensembl chr 2:121,337,776...121,649,476
Ensembl chr 2:121,337,776...121,649,476
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in IMP (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:33,496,245...33,718,356
Ensembl chr 3:33,496,245...33,718,356
JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:123,354,065...123,380,326
Ensembl chr 9:123,356,170...123,380,324
JBrowse link
G DAG1 dystroglycan 1 involved_in IMP (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:49,468,703...49,535,618
Ensembl chr 3:49,468,703...49,535,618
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69170|PMID:7958910) Ensembl
MGI
PMID:7958910 GO_REF:0000107 MGI:69170 NCBI chr20:44,355,699...44,434,596
Ensembl chr20:44,355,700...44,434,596
JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430444|PMID:20040491) Ensembl
MGI
PMID:20040491 GO_REF:0000107 MGI:4430444 NCBI chr10:70,431,936...70,447,951
Ensembl chr10:70,431,936...70,447,951
JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IMP (PMID:23940118) UniProt PMID:23940118 NCBI chr11:118,606,296...118,658,028
Ensembl chr11:118,606,440...118,658,031
JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IMP (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:111,732,496...111,976,517
Ensembl chr 3:111,732,497...111,976,517
JBrowse link
G POGLUT1 protein O-glucosyltransferase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:119,468,955...119,494,708
Ensembl chr 3:119,468,963...119,494,708
JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chr18:3,412,009...3,459,978
Ensembl chr18:3,411,608...3,459,978
JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430444|PMID:20040491) Ensembl
MGI
PMID:20040491 GO_REF:0000107 MGI:4430444 NCBI chr20:36,573,464...36,593,950
Ensembl chr20:36,573,488...36,593,950
JBrowse link
regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in IC (PMID:18371931) BHF-UCL PMID:18371931 NCBI chr 3:132,680,609...132,722,409
Ensembl chr 3:132,680,609...132,722,414
Ensembl chr 3:132,680,609...132,722,414
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18673
    multicellular organismal process 8828
      multicellular organism development 6399
        embryo development 1330
          regulation of embryonic development 67
            inhibition of neuroepithelial cell differentiation + 2
            lung induction + 3
            negative regulation of embryonic development + 2
            positive regulation of embryonic development + 24
            positive regulation of posterior neural plate formation by Wnt signaling pathway 0
            positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
            regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
            regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
            regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
            regulation of embryonic cell shape + 3
            regulation of gastrulation + 19
            regulation of planar cell polarity pathway involved in neural tube closure + 2
Path 2
Term Annotations click to browse term
  biological_process 18673
    biological regulation 13349
      regulation of biological process 12687
        regulation of multicellular organismal process 3116
          regulation of multicellular organismal development 1595
            regulation of embryonic development 67
              inhibition of neuroepithelial cell differentiation + 2
              lung induction + 3
              negative regulation of embryonic development + 2
              positive regulation of embryonic development + 24
              positive regulation of posterior neural plate formation by Wnt signaling pathway 0
              positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
              regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
              regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
              regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
              regulation of embryonic cell shape + 3
              regulation of gastrulation + 19
              regulation of planar cell polarity pathway involved in neural tube closure + 2
paths to the root