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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of embryonic development
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Accession:GO:0045995 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of embryonic development.


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regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,126,730...1,141,978
Ensembl chr12:1,126,732...1,137,896
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:48,404,351...48,456,360
Ensembl chr23:48,407,316...48,456,654
JBrowse link
G EHMT1 euchromatic histone lysine methyltransferase 1 involved_in ISO (MGI:3575040|PMID:15774718) UniProt PMID:15774718 MGI:3575040 NCBI chr 9:48,031,593...48,110,954
Ensembl chr 9:48,032,709...48,175,828
JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6451356|PMID:31761678) Ensembl
MGI
PMID:31761678 GO_REF:0000107 MGI:6451356 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601
JBrowse link
G INSR insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046
JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151
JBrowse link
G LAMA2 laminin subunit alpha 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:67,645,461...68,096,506
Ensembl chr 1:67,611,122...68,095,914
JBrowse link
G LAMA3 laminin subunit alpha 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:64,405,719...64,654,910
Ensembl chr 7:64,406,082...64,655,268
JBrowse link
G LAMA4 laminin subunit alpha 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:68,535,614...68,639,115
Ensembl chr12:68,535,860...68,678,762
JBrowse link
G NFE2L2 nuclear factor, erythroid 2 like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3040741|PMID:15087497) Ensembl
MGI
PMID:15087497 GO_REF:0000107 MGI:3040741 NCBI chr36:20,989,205...21,087,044
Ensembl chr36:20,989,360...21,012,524
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,587,769...3,612,184
Ensembl chr19:3,588,695...3,609,307
JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 acts_upstream_of_or_within ISO (MGI:4420513|PMID:19884348) MGI PMID:19884348 MGI:4420513
G RAB14 RAB14, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:74,157,497...74,172,817
Ensembl chr11:74,159,414...74,172,810
JBrowse link
G RACGAP1 Rac GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:4,689,914...4,718,181
Ensembl chr27:4,689,483...4,727,933
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124
JBrowse link
G TDG thymine DNA glycosylase involved_in ISO (MGI:5141157|PMID:21722948), (MGI:5487523|PMID:21278727) UniProt PMID:21278727 PMID:21722948 MGI:5141157 MGI:5487523 NCBI chr15:42,493,593...42,516,868
Ensembl chr15:42,493,737...42,515,448
JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:42,060,103...42,208,326
Ensembl chr25:42,060,991...42,208,054
JBrowse link
inhibition of neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640721|PMID:16678814) Ensembl
MGI
PMID:16678814 GO_REF:0000107 MGI:3640721 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689)
(MGI:4361775|PMID:19805295)
Ensembl
MGI
PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069
JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr17:63,034,719...63,054,369
Ensembl chr17:63,035,883...63,047,956
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX18 T-box transcription factor 18 involved_in ISO (MGI:3722519|PMID:17584735) BHF-UCL PMID:17584735 MGI:3722519 NCBI chr12:44,901,076...44,929,730
Ensembl chr12:44,873,119...44,929,205
JBrowse link
negative regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP2 secreted frizzled related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
negative regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPS6KA6 ribosomal protein S6 kinase A6 involved_in ISO (MGI:3041939|PMID:15121846) UniProt PMID:15121846 MGI:3041939 NCBI chr  X:64,915,871...65,111,095
Ensembl chr  X:64,921,230...65,111,116
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3804618|PMID:18173746) MGI PMID:18173746 MGI:3804618
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:28,563,189...28,830,503
Ensembl chr19:28,595,040...28,827,645
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr23:3,261,778...3,423,698
Ensembl chr23:3,246,522...3,421,716
JBrowse link
G DAG1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,090,823...15,138,397
Ensembl chr 5:15,090,813...15,134,784
JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:16,521,087...16,615,774
Ensembl chr33:16,497,202...16,614,132
JBrowse link
positive regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 involved_in ISO (PMID:10654605) BHF-UCL PMID:10654605 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT4 Wnt family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link
positive regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMOT angiomotin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2655854|PMID:12676095) Ensembl
MGI
PMID:12676095 GO_REF:0000107 MGI:2655854 NCBI chr  X:85,742,610...85,807,557
Ensembl chr  X:85,745,207...85,807,353
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804
JBrowse link
G CFL1 cofilin 1 involved_in ISO (MGI:6296386|PMID:25208553) UniProt PMID:25208553 MGI:6296386 NCBI chr18:51,404,649...51,408,240
Ensembl chr18:51,401,659...51,408,212
JBrowse link
G FOXA2 forkhead box A2 involved_in ISS UniProt GO_REF:0000024 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISO (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr12:35,434,123...35,435,679
Ensembl chr12:35,434,123...35,468,943
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G NLRP5 NLR family pyrin domain containing 5 involved_in ISO (MGI:5430272|PMID:22357545) UniProt PMID:22357545 MGI:5430272 NCBI chr 1:101,813,449...101,842,643
Ensembl chr 1:101,813,449...101,842,633
JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:5,041,656...5,139,859
Ensembl chr20:5,052,232...5,133,721
JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400
JBrowse link
G PLCB1 phospholipase C beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:13,337,285...13,996,218
Ensembl chr24:13,322,296...13,995,539
JBrowse link
G RBM19 RNA binding motif protein 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:11,042,737...11,169,786
Ensembl chr26:11,031,159...11,169,764
JBrowse link
G TLE6 TLE family member 6, subcortical maternal complex member involved_in ISO (MGI:6296386|PMID:25208553) UniProt PMID:25208553 MGI:6296386 NCBI chr20:56,159,045...56,169,740 JBrowse link
G UTP25 UTP25 small subunit processor component involved_in ISO (MGI:6285032|PMID:29262616) UniProt PMID:29262616 MGI:6285032 NCBI chr 7:8,477,026...8,512,713
Ensembl chr 7:8,488,350...8,512,705
JBrowse link
positive regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 involved_in ISS UniProt GO_REF:0000024 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228
JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in ISO (MGI:5009762|PMID:21281489) UniProt PMID:21281489 MGI:5009762 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225
JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr13:37,701,781...37,704,949
Ensembl chr13:37,703,232...37,704,657
JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:17,819,846...20,234,096
Ensembl chr21:19,732,991...20,230,305
JBrowse link
regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:28,563,189...28,830,503
Ensembl chr19:28,595,040...28,827,645
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr23:3,261,778...3,423,698
Ensembl chr23:3,246,522...3,421,716
JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:59,427,661...59,450,436
Ensembl chr 9:59,427,569...59,450,434
JBrowse link
G DAG1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69170|PMID:7958910) Ensembl
MGI
PMID:7958910 GO_REF:0000107 MGI:69170 NCBI chr24:31,847,864...31,908,337
Ensembl chr24:31,847,961...31,905,916
JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430444|PMID:20040491) Ensembl
MGI
PMID:20040491 GO_REF:0000107 MGI:4430444 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,090,823...15,138,397
Ensembl chr 5:15,090,813...15,134,784
JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:16,521,087...16,615,774
Ensembl chr33:16,497,202...16,614,132
JBrowse link
G POGLUT1 protein O-glucosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:23,122,682...23,150,863
Ensembl chr33:23,121,563...23,148,678
JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912
JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430444|PMID:20040491) Ensembl
MGI
PMID:20040491 GO_REF:0000107 MGI:4430444 NCBI chr24:25,360,363...25,375,531
Ensembl chr24:25,364,357...25,373,302
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16218
    multicellular organismal process 7705
      multicellular organism development 5437
        embryo development 1272
          regulation of embryonic development 58
            inhibition of neuroepithelial cell differentiation + 2
            lung induction + 3
            negative regulation of embryonic development + 2
            positive regulation of embryonic development + 21
            positive regulation of posterior neural plate formation by Wnt signaling pathway 0
            positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
            regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
            regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
            regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
            regulation of embryonic cell shape + 0
            regulation of gastrulation + 18
            regulation of planar cell polarity pathway involved in neural tube closure + 1
Path 2
Term Annotations click to browse term
  biological_process 16218
    biological regulation 11654
      regulation of biological process 11037
        regulation of multicellular organismal process 2830
          regulation of multicellular organismal development 1458
            regulation of embryonic development 58
              inhibition of neuroepithelial cell differentiation + 2
              lung induction + 3
              negative regulation of embryonic development + 2
              positive regulation of embryonic development + 21
              positive regulation of posterior neural plate formation by Wnt signaling pathway 0
              positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
              regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
              regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
              regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
              regulation of embryonic cell shape + 0
              regulation of gastrulation + 18
              regulation of planar cell polarity pathway involved in neural tube closure + 1
paths to the root