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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of embryonic development
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Accession:GO:0045995 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of embryonic development.


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regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (MGI:5427564|PMID:22422825) UniProt PMID:22422825 MGI:5427564 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 involved_in ISO (MGI:3575040|PMID:15774718) UniProt PMID:15774718 MGI:3575040 NCBI chrNW_004955513:5,491,446...5,642,559
Ensembl chrNW_004955513:5,547,313...5,641,499
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (MGI:6451356|PMID:31761678) MGI PMID:31761678 MGI:6451356 NCBI chrNW_004955430:6,955,575...6,956,991
Ensembl chrNW_004955430:6,955,575...6,956,991
JBrowse link
G Insr insulin receptor involved_in ISO (PMID:7693131) BHF-UCL PMID:7693131 NCBI chrNW_004955563:1,867,400...2,011,845
Ensembl chrNW_004955563:1,867,400...2,009,149
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2 like 2 acts_upstream_of_or_within ISO (MGI:3040741|PMID:15087497) MGI PMID:15087497 MGI:3040741 NCBI chrNW_004955403:19,510,122...19,536,428
Ensembl chrNW_004955403:19,532,103...19,535,944
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO (PMID:19242925) BHF-UCL PMID:19242925 NCBI chrNW_004955426:21,666,958...21,841,515
Ensembl chrNW_004955426:21,666,857...21,841,515
JBrowse link
G Noct nocturnin involved_in ISO (MGI:5494762|PMID:23449310) UniProt PMID:23449310 MGI:5494762 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Phlda2 pleckstrin homology like domain family A member 2 acts_upstream_of_or_within ISO (MGI:4420513|PMID:19884348) MGI PMID:19884348 MGI:4420513 NCBI chrNW_004955422:14,617,794...14,619,595
Ensembl chrNW_004955422:14,617,794...14,619,595
JBrowse link
G Rab14 RAB14, member RAS oncogene family involved_in ISO (MGI:4889011|PMID:21238925) UniProt PMID:21238925 MGI:4889011 NCBI chrNW_004955419:6,790,110...6,812,870
Ensembl chrNW_004955419:6,790,707...6,812,870
JBrowse link
G Racgap1 Rac GTPase activating protein 1 involved_in ISO (MGI:1934490|PMID:11287179) UniProt PMID:11287179 MGI:1934490 NCBI chrNW_004955547:584,885...615,883
Ensembl chrNW_004955547:581,134...616,087
JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO (MGI:2178090|PMID:11973269) UniProt PMID:11973269 MGI:2178090 NCBI chrNW_004955454:13,689,403...13,690,019 JBrowse link
G Tdg thymine DNA glycosylase involved_in ISO (MGI:5141157|PMID:21722948), (MGI:5487523|PMID:21278727) UniProt PMID:21278727 PMID:21722948 MGI:5141157 MGI:5487523 NCBI chrNW_004955405:38,661,687...38,680,138
Ensembl chrNW_004955405:38,673,180...38,678,481
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in ISO (MGI:5303027|PMID:22028794) UniProt PMID:22028794 MGI:5303027 NCBI chrNW_004955453:5,132,776...5,272,250
Ensembl chrNW_004955453:5,134,016...5,271,399
JBrowse link
inhibition of neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:3640721|PMID:16678814) MGI PMID:16678814 MGI:3640721 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689)
(MGI:4361775|PMID:19805295)
MGI PMID:19686689 PMID:19805295 MGI:4360856 MGI:4361775 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chrNW_004955432:22,988,208...23,024,530
Ensembl chrNW_004955432:22,984,170...23,027,705
JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chrNW_004955435:15,948,262...15,962,958
Ensembl chrNW_004955435:15,948,262...15,962,958
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx18 T-box transcription factor 18 involved_in ISO (MGI:3722519|PMID:17584735) BHF-UCL PMID:17584735 MGI:3722519 NCBI chrNW_004955411:12,194,560...12,232,374
Ensembl chrNW_004955411:12,194,550...12,232,374
JBrowse link
negative regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp2 secreted frizzled related protein 2 involved_in ISO (MGI:1349347|PMID:10654605) BHF-UCL PMID:10654605 MGI:1349347 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
JBrowse link
negative regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rps6ka6 ribosomal protein S6 kinase A6 involved_in ISO (MGI:3041939|PMID:15121846) UniProt PMID:15121846 MGI:3041939 NCBI chrNW_004955529:3,115,652...3,296,505
Ensembl chrNW_004955529:3,149,407...3,296,105
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3804618|PMID:18173746) MGI PMID:18173746 MGI:3804618 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447
JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955459:8,382,671...8,628,048
Ensembl chrNW_004955459:8,408,160...8,629,344
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955421:767,648...957,160
Ensembl chrNW_004955421:767,210...897,457
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955532:1,446,553...1,465,310
Ensembl chrNW_004955532:1,397,900...1,466,312
JBrowse link
G Phldb1 pleckstrin homology like domain family B member 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955412:19,754,997...19,800,984
Ensembl chrNW_004955412:19,756,379...19,800,984
JBrowse link
G Phldb2 pleckstrin homology like domain family B member 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955427:12,284,100...12,385,755
Ensembl chrNW_004955427:12,273,062...12,388,217
JBrowse link
positive regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in ISO (PMID:10654605) BHF-UCL PMID:10654605 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:10654605) BHF-UCL PMID:10654605 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:10654605) BHF-UCL PMID:10654605 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
positive regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amot angiomotin acts_upstream_of_or_within ISO (MGI:2655854|PMID:12676095) MGI PMID:12676095 MGI:2655854 NCBI chrNW_004955490:2,965,899...3,042,541
Ensembl chrNW_004955490:2,965,539...3,042,606
JBrowse link
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6238824|PMID:20574042) UniProt PMID:20574042 MGI:6238824 NCBI chrNW_004955445:8,471,684...8,559,672
Ensembl chrNW_004955445:8,534,220...8,559,672
JBrowse link
G Cfl1 cofilin 1 involved_in ISO (MGI:6296386|PMID:25208553) UniProt PMID:25208553 MGI:6296386 NCBI chrNW_004955422:19,479,181...19,482,571
Ensembl chrNW_004955422:19,479,181...19,482,571
JBrowse link
G Foxa2 forkhead box A2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Nr2c2 nuclear receptor subfamily 2 group C member 2 involved_in ISO (MGI:4355296|PMID:19131575) UniProt PMID:19131575 MGI:4355296 NCBI chrNW_004955429:17,386,190...17,430,820
Ensembl chrNW_004955429:17,386,190...17,430,820
JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) CACAO PMID:23533177 MGI:5477842 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452
JBrowse link
G Plcb1 phospholipase C beta 1 involved_in ISO (MGI:2136696|PMID:11464583) BHF-UCL PMID:11464583 MGI:2136696 NCBI chrNW_004955415:18,210,608...18,915,099
Ensembl chrNW_004955415:18,210,662...18,915,158
JBrowse link
G Rbm19 RNA binding motif protein 19 involved_in ISO (MGI:3608543|PMID:16027046) UniProt PMID:16027046 MGI:3608543 NCBI chrNW_004955482:9,930,237...10,032,597
Ensembl chrNW_004955482:9,932,137...10,032,692
JBrowse link
G Tle6 TLE family member 6, subcortical maternal complex member involved_in ISO (MGI:6296386|PMID:25208553) UniProt PMID:25208553 MGI:6296386 NCBI chrNW_004955495:5,367,237...5,369,601 JBrowse link
G Utp25 UTP25 small subunit processor component involved_in ISO (MGI:6285032|PMID:29262616) UniProt PMID:29262616 MGI:6285032 NCBI chrNW_004955489:2,362,290...2,387,162
Ensembl chrNW_004955489:2,339,745...2,387,103
JBrowse link
positive regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:21281489) UniProt PMID:21281489 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO (MGI:5009762|PMID:21281489) UniProt PMID:21281489 MGI:5009762 NCBI chrNW_004955417:14,502,450...14,510,015
Ensembl chrNW_004955417:14,502,451...14,510,160
JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chrNW_004955454:2,886,981...2,888,829
Ensembl chrNW_004955454:2,886,981...2,888,829
JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in ISO (MGI:3531238|PMID:15489520) UniProt PMID:15489520 MGI:3531238 NCBI chrNW_004955414:12,649,128...13,364,523
Ensembl chrNW_004955414:12,867,974...13,364,580
JBrowse link
regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955459:8,382,671...8,628,048
Ensembl chrNW_004955459:8,408,160...8,629,344
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955421:767,648...957,160
Ensembl chrNW_004955421:767,210...897,457
JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5700252|PMID:26496195) UniProt PMID:26496195 MGI:5700252 NCBI chrNW_004955419:4,604,883...4,626,675
Ensembl chrNW_004955419:4,607,507...4,626,608
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955532:1,446,553...1,465,310
Ensembl chrNW_004955532:1,397,900...1,466,312
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha acts_upstream_of_or_within ISO (MGI:69170|PMID:7958910) MGI PMID:7958910 MGI:69170 NCBI chrNW_004955445:12,925,248...12,962,501
Ensembl chrNW_004955445:12,924,662...12,984,281
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link
G Phldb1 pleckstrin homology like domain family B member 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955412:19,754,997...19,800,984
Ensembl chrNW_004955412:19,756,379...19,800,984
JBrowse link
G Phldb2 pleckstrin homology like domain family B member 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955427:12,284,100...12,385,755
Ensembl chrNW_004955427:12,273,062...12,388,217
JBrowse link
G Poglut1 protein O-glucosyltransferase 1 involved_in ISO (MGI:5700252|PMID:26496195) UniProt PMID:26496195 MGI:5700252 NCBI chrNW_004955427:19,188,512...19,206,050
Ensembl chrNW_004955427:19,188,183...19,206,050
JBrowse link
G Tgif1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chrNW_004955402:7,130,809...7,138,945
Ensembl chrNW_004955402:7,129,484...7,138,340
JBrowse link
G Tgif2 TGFB induced factor homeobox 2 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chrNW_004955422:25,024,359...25,042,568
Ensembl chrNW_004955422:25,024,359...25,041,459
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11939
    multicellular organismal process 6220
      multicellular organism development 4848
        embryo development 1173
          regulation of embryonic development 52
            inhibition of neuroepithelial cell differentiation + 2
            lung induction + 3
            negative regulation of embryonic development + 2
            positive regulation of embryonic development + 19
            positive regulation of posterior neural plate formation by Wnt signaling pathway 0
            positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
            regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
            regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
            regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
            regulation of embryonic cell shape + 0
            regulation of gastrulation + 18
            regulation of planar cell polarity pathway involved in neural tube closure + 1
Path 2
Term Annotations click to browse term
  biological_process 11939
    biological regulation 8748
      regulation of biological process 8284
        regulation of multicellular organismal process 2585
          regulation of multicellular organismal development 1328
            regulation of embryonic development 52
              inhibition of neuroepithelial cell differentiation + 2
              lung induction + 3
              negative regulation of embryonic development + 2
              positive regulation of embryonic development + 19
              positive regulation of posterior neural plate formation by Wnt signaling pathway 0
              positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
              regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
              regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
              regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
              regulation of embryonic cell shape + 0
              regulation of gastrulation + 18
              regulation of planar cell polarity pathway involved in neural tube closure + 1
paths to the root